RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 TSPY4P0CV99 314 aa11.87□□□□□ -0.51
YBX3-204ENST00000366290 TSPY10P0CW01 314 aa11.87□□□□□ -0.51
YBX3-204ENST00000366290 WEE1P30291 646 aa11.87□□□□□ -0.51
YBX3-204ENST00000366290 PTGIRP43119 386 aa11.87□□□□□ -0.51
YBX3-204ENST00000366290 EPHA4P54764 986 aa11.87□□□□□ -0.51
YBX3-204ENST00000366290 C1orf216Q8TAB5 229 aa11.87□□□□□ -0.51
YBX3-204ENST00000366290 XAGE2Q96GT9 111 aa11.87□□□□□ -0.51
YBX3-204ENST00000366290 GNEQ9Y223 722 aaKnown RBP11.87□□□□□ -0.51
YBX3-204ENST00000366290 CROCC2H7BZ55 1655 aa11.87□□□□□ -0.51
YBX3-204ENST00000366290 A0A1W2PRU2 124 aa11.86□□□□□ -0.51
YBX3-204ENST00000366290 RELBQ01201 579 aa11.86□□□□□ -0.51
YBX3-204ENST00000366290 CLN3Q13286 438 aa11.86□□□□□ -0.51
YBX3-204ENST00000366290 CNKSR1Q969H4 720 aa11.86□□□□□ -0.51
YBX3-204ENST00000366290 GZF1Q9H116 711 aaPredicted RBP11.86□□□□□ -0.51
YBX3-204ENST00000366290 DNMT1P26358 1616 aaKnown RBP11.86□□□□□ -0.51
YBX3-204ENST00000366290 NPATQ14207 1427 aa11.86□□□□□ -0.51
YBX3-204ENST00000366290 TXNDC2Q86VQ3 553 aa11.85□□□□□ -0.51
YBX3-204ENST00000366290 ESYT1Q9BSJ8 1104 aa11.85□□□□□ -0.51
YBX3-204ENST00000366290 LTBP4Q8N2S1 1624 aa11.85□□□□□ -0.51
YBX3-204ENST00000366290 PTPRTO14522 1441 aa11.85□□□□□ -0.51
YBX3-204ENST00000366290 ABCC5O15440 1437 aa11.85□□□□□ -0.51
YBX3-204ENST00000366290 A6NJY4 79 aa11.84□□□□□ -0.51
YBX3-204ENST00000366290 ARID4AP29374 1257 aaPredicted RBP11.84□□□□□ -0.51
YBX3-204ENST00000366290 SCNN1AP37088 669 aa11.84□□□□□ -0.51
YBX3-204ENST00000366290 SMTNP53814 917 aa11.84□□□□□ -0.51
YBX3-204ENST00000366290 SCARF1Q14162 830 aa11.84□□□□□ -0.51
YBX3-204ENST00000366290 LINC00528Q8N1L1 170 aa11.84□□□□□ -0.51
YBX3-204ENST00000366290 CCER1Q8TC90 406 aaPredicted RBP11.84□□□□□ -0.51
YBX3-204ENST00000366290 RNF17Q9BXT8 1623 aaKnown RBP11.84□□□□□ -0.51
YBX3-204ENST00000366290 EIF2AK4Q9P2K8 1649 aaKnown RBP11.84□□□□□ -0.51
YBX3-204ENST00000366290 CLTCQ00610 1675 aaKnown RBP11.84□□□□□ -0.51
YBX3-204ENST00000366290 ZMYM3Q14202 1370 aa11.83□□□□□ -0.52
YBX3-204ENST00000366290 MEN1O00255 615 aa11.83□□□□□ -0.52
YBX3-204ENST00000366290 IGFBP4P22692 258 aa11.83□□□□□ -0.52
YBX3-204ENST00000366290 NFX1Q12986 1120 aaKnown RBP11.83□□□□□ -0.52
YBX3-204ENST00000366290 MTFR1Q15390 333 aa11.83□□□□□ -0.52
YBX3-204ENST00000366290 TLR1Q15399 786 aa11.83□□□□□ -0.52
YBX3-204ENST00000366290 TREML4Q6UXN2 200 aa11.83□□□□□ -0.52
YBX3-204ENST00000366290 ILDR2Q71H61 639 aa11.83□□□□□ -0.52
YBX3-204ENST00000366290 TAS1R3Q7RTX0 852 aa11.83□□□□□ -0.52
YBX3-204ENST00000366290 SCG3Q8WXD2 468 aaKnown RBP11.83□□□□□ -0.52
YBX3-204ENST00000366290 TSPAN10Q9H1Z9 355 aaPredicted RBP11.83□□□□□ -0.52
YBX3-204ENST00000366290 HRH3Q9Y5N1 445 aa11.83□□□□□ -0.52
YBX3-204ENST00000366290 DAPK1P53355 1430 aa11.83□□□□□ -0.52
YBX3-204ENST00000366290 DUOX2Q9NRD8 1548 aa11.82□□□□□ -0.52
YBX3-204ENST00000366290 GAS2L2Q8NHY3 880 aa11.82□□□□□ -0.52
YBX3-204ENST00000366290 ZNF395Q9H8N7 513 aaPredicted RBP11.82□□□□□ -0.52
YBX3-204ENST00000366290 SCHIP1Q9P0W5 487 aaPredicted RBP11.82□□□□□ -0.52
YBX3-204ENST00000366290 NCOA1Q15788 1441 aa11.82□□□□□ -0.52
YBX3-204ENST00000366290 ATAD2Q6PL18 1390 aa11.81□□□□□ -0.52
YBX3-204ENST00000366290 FOXK2Q01167 660 aa11.81□□□□□ -0.52
YBX3-204ENST00000366290 FKBP5Q13451 457 aaPredicted RBP11.81□□□□□ -0.52
YBX3-204ENST00000366290 C6orf118Q5T5N4 469 aa11.81□□□□□ -0.52
YBX3-204ENST00000366290 SLC9A9Q8IVB4 645 aa11.81□□□□□ -0.52
YBX3-204ENST00000366290 KDM5DQ9BY66 1539 aa11.81□□□□□ -0.52
YBX3-204ENST00000366290 PTPRKQ15262 1439 aa11.8□□□□□ -0.52
YBX3-204ENST00000366290 KIF3BO15066 747 aa11.8□□□□□ -0.52
YBX3-204ENST00000366290 C21orf2O43822 256 aa11.8□□□□□ -0.52
YBX3-204ENST00000366290 LCE2CQ5TA81 110 aa11.8□□□□□ -0.52
YBX3-204ENST00000366290 GGT6Q6P531 493 aa11.8□□□□□ -0.52
YBX3-204ENST00000366290 NLRP3Q96P20 1036 aa11.8□□□□□ -0.52
YBX3-204ENST00000366290 ERBINQ96RT1 1412 aa11.79□□□□□ -0.52
YBX3-204ENST00000366290 ADGRL2O95490 1459 aa11.79□□□□□ -0.52
YBX3-204ENST00000366290 FOXO3O43524 673 aa11.79□□□□□ -0.52
YBX3-204ENST00000366290 CENPCQ03188 943 aa11.79□□□□□ -0.52
YBX3-204ENST00000366290 TBCELQ5QJ74 424 aa11.79□□□□□ -0.52
YBX3-204ENST00000366290 PPARGC1BQ86YN6 1023 aaKnown RBP11.79□□□□□ -0.52
YBX3-204ENST00000366290 TSEN34Q9BSV6 310 aaKnown RBP11.79□□□□□ -0.52
YBX3-204ENST00000366290 MKNK1Q9BUB5 465 aa11.79□□□□□ -0.52
YBX3-204ENST00000366290 MROH1Q8NDA8 1641 aa11.78□□□□□ -0.52
YBX3-204ENST00000366290 ZC3H13Q5T200 1668 aaKnown RBP11.78□□□□□ -0.52
YBX3-204ENST00000366290 SOBPA7XYQ1 873 aa11.78□□□□□ -0.52
YBX3-204ENST00000366290 CDK2AP1O14519 115 aa11.78□□□□□ -0.52
YBX3-204ENST00000366290 TERTO14746 1132 aaKnown RBP11.78□□□□□ -0.52
YBX3-204ENST00000366290 PPP1R12BO60237 982 aaPredicted RBP11.78□□□□□ -0.52
YBX3-204ENST00000366290 FHDC1Q9C0D6 1143 aaPredicted RBP11.78□□□□□ -0.52
YBX3-204ENST00000366290 IQSEC3Q9UPP2 1182 aaPredicted RBP11.78□□□□□ -0.52
YBX3-204ENST00000366290 MTMR7Q9Y216 660 aa11.78□□□□□ -0.52
YBX3-204ENST00000366290 USP3Q9Y6I4 520 aa11.78□□□□□ -0.52
YBX3-204ENST00000366290 CAMSAP1Q5T5Y3 1602 aa11.78□□□□□ -0.52
YBX3-204ENST00000366290 KIF15Q9NS87 1388 aa11.78□□□□□ -0.52
YBX3-204ENST00000366290 ZNF142P52746 1687 aaPredicted RBP11.78□□□□□ -0.52
YBX3-204ENST00000366290 WFS1O76024 890 aa11.77□□□□□ -0.53
YBX3-204ENST00000366290 BMP2P12643 396 aa11.77□□□□□ -0.53
YBX3-204ENST00000366290 SERPINB4P48594 390 aa11.77□□□□□ -0.53
YBX3-204ENST00000366290 DEPDC5O75140 1603 aa11.77□□□□□ -0.53
YBX3-204ENST00000366290 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.77□□□□□ -0.53
YBX3-204ENST00000366290 PZPP20742 1482 aa11.76□□□□□ -0.53
YBX3-204ENST00000366290 ABCC3O15438 1527 aa11.76□□□□□ -0.53
YBX3-204ENST00000366290 PRDM15P57071 1507 aaPredicted RBP11.76□□□□□ -0.53
YBX3-204ENST00000366290 UPP2O95045 317 aa11.76□□□□□ -0.53
YBX3-204ENST00000366290 TMCO4Q5TGY1 634 aa11.76□□□□□ -0.53
YBX3-204ENST00000366290 SEPT3Q9UH03 358 aa11.76□□□□□ -0.53
YBX3-204ENST00000366290 ANKRD30AQ9BXX3 1397 aa11.76□□□□□ -0.53
YBX3-204ENST00000366290 MYO3AQ8NEV4 1616 aa11.75□□□□□ -0.53
YBX3-204ENST00000366290 SPINT1O43278 529 aa11.75□□□□□ -0.53
YBX3-204ENST00000366290 PTCD1O75127 700 aaKnown RBP11.75□□□□□ -0.53
YBX3-204ENST00000366290 CAPN12Q6ZSI9 719 aa11.75□□□□□ -0.53
YBX3-204ENST00000366290 NBPF15Q8N660 670 aa11.75□□□□□ -0.53
YBX3-204ENST00000366290 INSM2Q96T92 566 aaPredicted RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms