RNA–Protein interactions for RNA: ENST00000365040.1

RNU1-140P-201, Transcript of RNA, U1 small nuclear 140, pseudogene, humanhuman

BASIC

Gene RNU1-140P, Length 165 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-140P-201ENST00000365040 FOXC1Q12948 553 aa4.81□□□□□ -1.64
RNU1-140P-201ENST00000365040 SWI5Q1ZZU3 235 aa4.81□□□□□ -1.64
RNU1-140P-201ENST00000365040 PPP1R26Q5T8A7 1209 aaPredicted RBP4.81□□□□□ -1.64
RNU1-140P-201ENST00000365040 DNAAF2Q9NVR5 837 aaKnown RBP4.81□□□□□ -1.64
RNU1-140P-201ENST00000365040 LRP5O75197 1615 aa4.81□□□□□ -1.64
RNU1-140P-201ENST00000365040 COL22A1Q8NFW1 1626 aaPredicted RBP4.81□□□□□ -1.64
RNU1-140P-201ENST00000365040 SETBP1Q9Y6X0 1596 aa4.81□□□□□ -1.64
RNU1-140P-201ENST00000365040 GNRH1P01148 92 aa4.8□□□□□ -1.64
RNU1-140P-201ENST00000365040 RASA1P20936 1047 aa4.8□□□□□ -1.64
RNU1-140P-201ENST00000365040 PTK7Q13308 1070 aa4.8□□□□□ -1.64
RNU1-140P-201ENST00000365040 ESCO1Q5FWF5 840 aa4.8□□□□□ -1.64
RNU1-140P-201ENST00000365040 OGFOD1Q8N543 542 aa4.8□□□□□ -1.64
RNU1-140P-201ENST00000365040 ZNF784Q8NCA9 323 aaPredicted RBP4.8□□□□□ -1.64
RNU1-140P-201ENST00000365040 NGLY1Q96IV0 654 aa4.8□□□□□ -1.64
RNU1-140P-201ENST00000365040 NOVA2Q9UNW9 492 aaKnown RBP4.8□□□□□ -1.64
RNU1-140P-201ENST00000365040 EP400Q96L91 3159 aa4.8□□□□□ -1.64
RNU1-140P-201ENST00000365040 RGS12O14924 1447 aa4.8□□□□□ -1.64
RNU1-140P-201ENST00000365040 RIMS2Q9UQ26 1411 aa4.8□□□□□ -1.64
RNU1-140P-201ENST00000365040 E9PCH4 1651 aa4.8□□□□□ -1.64
RNU1-140P-201ENST00000365040 ADH1AP07327 375 aa4.79□□□□□ -1.64
RNU1-140P-201ENST00000365040 NR3C2P08235 984 aa4.79□□□□□ -1.64
RNU1-140P-201ENST00000365040 RAB15P59190 212 aa4.79□□□□□ -1.64
RNU1-140P-201ENST00000365040 CTC1Q2NKJ3 1217 aa4.79□□□□□ -1.64
RNU1-140P-201ENST00000365040 ANKMY2Q8IV38 441 aa4.79□□□□□ -1.64
RNU1-140P-201ENST00000365040 DEPDC4Q8N2C3 294 aa4.79□□□□□ -1.64
RNU1-140P-201ENST00000365040 RETREG2Q8NC44 543 aa4.79□□□□□ -1.64
RNU1-140P-201ENST00000365040 TRAIPQ9BWF2 469 aa4.79□□□□□ -1.64
RNU1-140P-201ENST00000365040 C19orf44Q9H6X5 657 aa4.79□□□□□ -1.64
RNU1-140P-201ENST00000365040 ABCC5O15440 1437 aa4.79□□□□□ -1.64
RNU1-140P-201ENST00000365040 TNFRSF10AO00220 468 aa4.78□□□□□ -1.64
RNU1-140P-201ENST00000365040 NRG2O14511 850 aaPredicted RBP4.78□□□□□ -1.64
RNU1-140P-201ENST00000365040 BACH1O14867 736 aa4.78□□□□□ -1.64
RNU1-140P-201ENST00000365040 AVPP01185 164 aa4.78□□□□□ -1.64
RNU1-140P-201ENST00000365040 PDIA4P13667 645 aaKnown RBP4.78□□□□□ -1.64
RNU1-140P-201ENST00000365040 TIMP2P16035 220 aa4.78□□□□□ -1.64
RNU1-140P-201ENST00000365040 SMPD1P17405 629 aa4.78□□□□□ -1.64
RNU1-140P-201ENST00000365040 SEC13P55735 322 aa4.78□□□□□ -1.64
RNU1-140P-201ENST00000365040 WDR4P57081 412 aaKnown RBP4.78□□□□□ -1.64
RNU1-140P-201ENST00000365040 RBM6P78332 1123 aaKnown RBP4.78□□□□□ -1.64
RNU1-140P-201ENST00000365040 CLDN10P78369 228 aa4.78□□□□□ -1.64
RNU1-140P-201ENST00000365040 PSME1Q06323 249 aa4.78□□□□□ -1.64
RNU1-140P-201ENST00000365040 IDI1Q13907 227 aa4.78□□□□□ -1.64
RNU1-140P-201ENST00000365040 CRTC2Q53ET0 693 aaPredicted RBP4.78□□□□□ -1.64
RNU1-140P-201ENST00000365040 CCDC102BQ68D86 513 aa4.78□□□□□ -1.64
RNU1-140P-201ENST00000365040 TRIM67Q6ZTA4 783 aa4.78□□□□□ -1.64
RNU1-140P-201ENST00000365040 Q6ZVU0 165 aa4.78□□□□□ -1.64
RNU1-140P-201ENST00000365040 NBPF15Q8N660 670 aa4.78□□□□□ -1.64
RNU1-140P-201ENST00000365040 LRRC59Q96AG4 307 aaKnown RBP4.78□□□□□ -1.64
RNU1-140P-201ENST00000365040 SLC26A8Q96RN1 970 aa4.78□□□□□ -1.64
RNU1-140P-201ENST00000365040 CDCA7Q9BWT1 371 aaPredicted RBP4.78□□□□□ -1.64
RNU1-140P-201ENST00000365040 OSBPL3Q9H4L5 887 aa4.78□□□□□ -1.64
RNU1-140P-201ENST00000365040 CYLDQ9NQC7 956 aa4.78□□□□□ -1.64
RNU1-140P-201ENST00000365040 PDZRN3Q9UPQ7 1066 aa4.78□□□□□ -1.64
RNU1-140P-201ENST00000365040 TBX22Q9Y458 520 aa4.78□□□□□ -1.64
RNU1-140P-201ENST00000365040 KIF1BO60333 1816 aa4.78□□□□□ -1.64
RNU1-140P-201ENST00000365040 PTCH1Q13635 1447 aa4.78□□□□□ -1.64
RNU1-140P-201ENST00000365040 AFF2P51816 1311 aa4.77□□□□□ -1.65
RNU1-140P-201ENST00000365040 SRCAPQ6ZRS2 3230 aa4.77□□□□□ -1.65
RNU1-140P-201ENST00000365040 NRXN3Q9Y4C0 1643 aa4.77□□□□□ -1.65
RNU1-140P-201ENST00000365040 LILRA1O75019 489 aa4.77□□□□□ -1.65
RNU1-140P-201ENST00000365040 DGAT1O75907 488 aa4.77□□□□□ -1.65
RNU1-140P-201ENST00000365040 ZIC2O95409 532 aaPredicted RBP4.77□□□□□ -1.65
RNU1-140P-201ENST00000365040 KCTD17Q8N5Z5 321 aa4.77□□□□□ -1.65
RNU1-140P-201ENST00000365040 MEIOBQ8N635 442 aa4.77□□□□□ -1.65
RNU1-140P-201ENST00000365040 TPCN2Q8NHX9 752 aa4.77□□□□□ -1.65
RNU1-140P-201ENST00000365040 FAM200AQ8TCP9 573 aa4.77□□□□□ -1.65
RNU1-140P-201ENST00000365040 CLP1Q92989 425 aaKnown RBP4.77□□□□□ -1.65
RNU1-140P-201ENST00000365040 KLF16Q9BXK1 252 aaPredicted RBP4.77□□□□□ -1.65
RNU1-140P-201ENST00000365040 ZMIZ1Q9ULJ6 1067 aa4.77□□□□□ -1.65
RNU1-140P-201ENST00000365040 PCDHGA11Q9Y5H2 935 aa4.77□□□□□ -1.65
RNU1-140P-201ENST00000365040 MST1RQ04912 1400 aa4.77□□□□□ -1.65
RNU1-140P-201ENST00000365040 ADAMTS13Q76LX8 1427 aa4.77□□□□□ -1.65
RNU1-140P-201ENST00000365040 ADGRL3Q9HAR2 1447 aa4.77□□□□□ -1.65
RNU1-140P-201ENST00000365040 ANKRD50Q9ULJ7 1429 aa4.77□□□□□ -1.65
RNU1-140P-201ENST00000365040 J3QL48 77 aa4.76□□□□□ -1.65
RNU1-140P-201ENST00000365040 UPP2O95045 317 aa4.76□□□□□ -1.65
RNU1-140P-201ENST00000365040 GPC1P35052 558 aa4.76□□□□□ -1.65
RNU1-140P-201ENST00000365040 SCTRP47872 440 aa4.76□□□□□ -1.65
RNU1-140P-201ENST00000365040 SMCPP49901 116 aaPredicted RBP4.76□□□□□ -1.65
RNU1-140P-201ENST00000365040 GDF10P55107 478 aa4.76□□□□□ -1.65
RNU1-140P-201ENST00000365040 CDC42BPGQ6DT37 1551 aa4.76□□□□□ -1.65
RNU1-140P-201ENST00000365040 PRAG1Q86YV5 1406 aa4.76□□□□□ -1.65
RNU1-140P-201ENST00000365040 CRIPAKQ8N1N5 446 aa4.76□□□□□ -1.65
RNU1-140P-201ENST00000365040 ITPKCQ96DU7 683 aa4.76□□□□□ -1.65
RNU1-140P-201ENST00000365040 ZNF594Q96JF6 807 aaPredicted RBP4.76□□□□□ -1.65
RNU1-140P-201ENST00000365040 TSEN34Q9BSV6 310 aaKnown RBP4.76□□□□□ -1.65
RNU1-140P-201ENST00000365040 TMPRSS4Q9NRS4 437 aa4.76□□□□□ -1.65
RNU1-140P-201ENST00000365040 RRP7BPQ9NSQ0 103 aa4.76□□□□□ -1.65
RNU1-140P-201ENST00000365040 KIF1AQ12756 1690 aa4.76□□□□□ -1.65
RNU1-140P-201ENST00000365040 PNPLA6Q8IY17 1366 aa4.76□□□□□ -1.65
RNU1-140P-201ENST00000365040 NWD2Q9ULI1 1742 aa4.75□□□□□ -1.65
RNU1-140P-201ENST00000365040 TMEM88BA6NKF7 163 aa4.75□□□□□ -1.65
RNU1-140P-201ENST00000365040 BRD1O95696 1058 aa4.75□□□□□ -1.65
RNU1-140P-201ENST00000365040 INHAP05111 366 aa4.75□□□□□ -1.65
RNU1-140P-201ENST00000365040 DPYDQ12882 1025 aa4.75□□□□□ -1.65
RNU1-140P-201ENST00000365040 CLN3Q13286 438 aa4.75□□□□□ -1.65
RNU1-140P-201ENST00000365040 PKDCCQ504Y2 493 aa4.75□□□□□ -1.65
RNU1-140P-201ENST00000365040 TMEM164Q5U3C3 297 aa4.75□□□□□ -1.65
RNU1-140P-201ENST00000365040 BRINP3Q76B58 766 aa4.75□□□□□ -1.65
RNU1-140P-201ENST00000365040 GAS2L2Q8NHY3 880 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms