RNA–Protein interactions for RNA: ENST00000361574.9

R3HDM4-201, Transcript of R3H domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene R3HDM4, Length 1,815 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-201ENST00000361574 A0A087WZG4 1122 aa27.83■■■□□ 2.05
R3HDM4-201ENST00000361574 TM6SF1Q9BZW5 370 aa27.83■■■□□ 2.05
R3HDM4-201ENST00000361574 PIP4K2AP48426 406 aaPredicted RBP27.83■■■□□ 2.05
R3HDM4-201ENST00000361574 PKP1Q13835 747 aa27.83■■■□□ 2.05
R3HDM4-201ENST00000361574 GZF1Q9H116 711 aaPredicted RBP27.82■■■□□ 2.04
R3HDM4-201ENST00000361574 COL14A1Q05707 1796 aaKnown RBP27.82■■■□□ 2.04
R3HDM4-201ENST00000361574 CCDC8Q9H0W5 538 aaPredicted RBP27.81■■■□□ 2.04
R3HDM4-201ENST00000361574 BRD1O95696 1058 aa27.81■■■□□ 2.04
R3HDM4-201ENST00000361574 ATP5JP18859 108 aa27.81■■■□□ 2.04
R3HDM4-201ENST00000361574 RASEFQ8IZ41 740 aa27.81■■■□□ 2.04
R3HDM4-201ENST00000361574 UPF3BQ9BZI7 483 aaKnown RBP27.81■■■□□ 2.04
R3HDM4-201ENST00000361574 JCADQ9P266 1359 aa27.8■■■□□ 2.04
R3HDM4-201ENST00000361574 PLCH1Q4KWH8 1693 aa27.8■■■□□ 2.04
R3HDM4-201ENST00000361574 MRE11P49959 708 aa27.8■■■□□ 2.04
R3HDM4-201ENST00000361574 FOXO4P98177 505 aa27.8■■■□□ 2.04
R3HDM4-201ENST00000361574 SIL1Q9H173 461 aa27.8■■■□□ 2.04
R3HDM4-201ENST00000361574 TLR7Q9NYK1 1049 aaKnown RBP27.8■■■□□ 2.04
R3HDM4-201ENST00000361574 LRP6O75581 1613 aa27.8■■■□□ 2.04
R3HDM4-201ENST00000361574 DISP2A7MBM2 1401 aa27.79■■■□□ 2.04
R3HDM4-201ENST00000361574 EVA1CP58658 441 aa27.79■■■□□ 2.04
R3HDM4-201ENST00000361574 CCDC171Q6TFL3 1326 aa27.79■■■□□ 2.04
R3HDM4-201ENST00000361574 TICAM2Q86XR7 235 aa27.79■■■□□ 2.04
R3HDM4-201ENST00000361574 VSIG10Q8N0Z9 540 aa27.79■■■□□ 2.04
R3HDM4-201ENST00000361574 CCDC191Q8NCU4 936 aa27.79■■■□□ 2.04
R3HDM4-201ENST00000361574 COL22A1Q8NFW1 1626 aaPredicted RBP27.79■■■□□ 2.04
R3HDM4-201ENST00000361574 KLHDC4Q8TBB5 520 aa27.79■■■□□ 2.04
R3HDM4-201ENST00000361574 LMBRD1Q9NUN5 540 aa27.79■■■□□ 2.04
R3HDM4-201ENST00000361574 CWC25Q9NXE8 425 aaPredicted RBP27.79■■■□□ 2.04
R3HDM4-201ENST00000361574 ATP5J2-PTCD1G3V325 749 aa27.78■■■□□ 2.04
R3HDM4-201ENST00000361574 PTCD1O75127 700 aaKnown RBP27.78■■■□□ 2.04
R3HDM4-201ENST00000361574 NECTIN1Q15223 517 aa27.78■■■□□ 2.04
R3HDM4-201ENST00000361574 TNNI3KQ59H18 835 aa27.78■■■□□ 2.04
R3HDM4-201ENST00000361574 FPGT-TNNI3KV9GXZ4 949 aa27.78■■■□□ 2.04
R3HDM4-201ENST00000361574 MED23Q9ULK4 1368 aa27.78■■■□□ 2.04
R3HDM4-201ENST00000361574 XRCC6P12956 609 aaKnown RBP eCLIP27.78■■■□□ 2.04
R3HDM4-201ENST00000361574 PTH1RQ03431 593 aa27.77■■■□□ 2.04
R3HDM4-201ENST00000361574 TTLL7Q6ZT98 887 aa27.77■■■□□ 2.04
R3HDM4-201ENST00000361574 MAP4K1Q92918 833 aa27.77■■■□□ 2.04
R3HDM4-201ENST00000361574 TEX13AQ9BXU3 409 aaPredicted RBP27.77■■■□□ 2.04
R3HDM4-201ENST00000361574 GPR108Q9NPR9 543 aa27.76■■■□□ 2.04
R3HDM4-201ENST00000361574 STRN4Q9NRL3 753 aa27.76■■■□□ 2.04
R3HDM4-201ENST00000361574 ITGB4P16144 1822 aa27.76■■■□□ 2.03
R3HDM4-201ENST00000361574 DDX54Q8TDD1 881 aaKnown RBP27.76■■■□□ 2.03
R3HDM4-201ENST00000361574 ATG3Q9NT62 314 aa27.76■■■□□ 2.03
R3HDM4-201ENST00000361574 A1BGP04217 495 aa27.75■■■□□ 2.03
R3HDM4-201ENST00000361574 NMIQ13287 307 aaPredicted RBP27.75■■■□□ 2.03
R3HDM4-201ENST00000361574 ZSWIM6Q9HCJ5 1215 aa27.75■■■□□ 2.03
R3HDM4-201ENST00000361574 DBNLQ9UJU6 430 aaKnown RBP27.75■■■□□ 2.03
R3HDM4-201ENST00000361574 TFCP2Q12800 502 aa27.74■■■□□ 2.03
R3HDM4-201ENST00000361574 MCTP1Q6DN14 999 aa27.74■■■□□ 2.03
R3HDM4-201ENST00000361574 LIMCH1Q9UPQ0 1083 aa27.74■■■□□ 2.03
R3HDM4-201ENST00000361574 AHDC1Q5TGY3 1603 aaPredicted RBP27.74■■■□□ 2.03
R3HDM4-201ENST00000361574 TRIM28Q13263 835 aaKnown RBP27.74■■■□□ 2.03
R3HDM4-201ENST00000361574 VPS53Q5VIR6 699 aa27.74■■■□□ 2.03
R3HDM4-201ENST00000361574 LMBR1LQ6UX01 489 aa27.74■■■□□ 2.03
R3HDM4-201ENST00000361574 BOLA2Q9H3K6 86 aa27.74■■■□□ 2.03
R3HDM4-201ENST00000361574 TMOD3Q9NYL9 352 aa27.74■■■□□ 2.03
R3HDM4-201ENST00000361574 ISCA1Q9BUE6 129 aa27.73■■■□□ 2.03
R3HDM4-201ENST00000361574 DDX49Q9Y6V7 483 aaKnown RBP27.73■■■□□ 2.03
R3HDM4-201ENST00000361574 RPAP1Q9BWH6 1393 aaPredicted RBP27.72■■■□□ 2.03
R3HDM4-201ENST00000361574 AK2P54819 239 aa27.71■■■□□ 2.03
R3HDM4-201ENST00000361574 JARID2Q92833 1246 aaPredicted RBP27.71■■■□□ 2.03
R3HDM4-201ENST00000361574 FAM227BQ96M60 508 aa27.71■■■□□ 2.03
R3HDM4-201ENST00000361574 FSD1Q9BTV5 496 aa27.71■■■□□ 2.03
R3HDM4-201ENST00000361574 WNK3Q9BYP7 1800 aa27.71■■■□□ 2.03
R3HDM4-201ENST00000361574 RUFY3Q7L099 469 aa27.71■■■□□ 2.03
R3HDM4-201ENST00000361574 GRPEL1Q9HAV7 217 aa27.71■■■□□ 2.03
R3HDM4-201ENST00000361574 TSGA10IPQ3SY00 556 aa27.7■■■□□ 2.02
R3HDM4-201ENST00000361574 HAUS7Q99871 368 aa27.7■■■□□ 2.02
R3HDM4-201ENST00000361574 RBM8AQ9Y5S9 174 aaKnown RBP27.7■■■□□ 2.02
R3HDM4-201ENST00000361574 CIAO1O76071 339 aa27.69■■■□□ 2.02
R3HDM4-201ENST00000361574 ZKSCAN1P17029 563 aaPredicted RBP27.69■■■□□ 2.02
R3HDM4-201ENST00000361574 ATG9AQ7Z3C6 839 aa27.69■■■□□ 2.02
R3HDM4-201ENST00000361574 ZSCAN31Q96LW9 406 aaPredicted RBP27.69■■■□□ 2.02
R3HDM4-201ENST00000361574 ALDH8A1Q9H2A2 487 aaPredicted RBP27.69■■■□□ 2.02
R3HDM4-201ENST00000361574 SPEF2Q9C093 1822 aa27.69■■■□□ 2.02
R3HDM4-201ENST00000361574 COL16A1Q07092 1604 aaPredicted RBP27.69■■■□□ 2.02
R3HDM4-201ENST00000361574 A0A0D9SFI3 127 aa27.69■■■□□ 2.02
R3HDM4-201ENST00000361574 CREB3L3Q68CJ9 461 aa27.69■■■□□ 2.02
R3HDM4-201ENST00000361574 PRPF40BQ6NWY9 871 aaKnown RBP27.69■■■□□ 2.02
R3HDM4-201ENST00000361574 CASTP20810 708 aaKnown RBP27.68■■■□□ 2.02
R3HDM4-201ENST00000361574 IL15P40933 162 aaPredicted RBP27.68■■■□□ 2.02
R3HDM4-201ENST00000361574 TCIRG1Q13488 830 aa27.68■■■□□ 2.02
R3HDM4-201ENST00000361574 SH2B1Q9NRF2 756 aaPredicted RBP27.68■■■□□ 2.02
R3HDM4-201ENST00000361574 FBXO3Q9UK99 471 aa27.68■■■□□ 2.02
R3HDM4-201ENST00000361574 CYP46A1Q9Y6A2 500 aa27.68■■■□□ 2.02
R3HDM4-201ENST00000361574 WDR33Q9C0J8 1336 aaKnown RBP27.68■■■□□ 2.02
R3HDM4-201ENST00000361574 ZNF445P59923 1031 aa27.67■■■□□ 2.02
R3HDM4-201ENST00000361574 USPL1Q5W0Q7 1092 aa27.67■■■□□ 2.02
R3HDM4-201ENST00000361574 HMG20BQ9P0W2 317 aa27.67■■■□□ 2.02
R3HDM4-201ENST00000361574 ZSCAN21Q9Y5A6 473 aaPredicted RBP27.67■■■□□ 2.02
R3HDM4-201ENST00000361574 PIGBQ92521 554 aa27.67■■■□□ 2.02
R3HDM4-201ENST00000361574 BTG4Q9NY30 223 aa27.67■■■□□ 2.02
R3HDM4-201ENST00000361574 PSMA5P28066 241 aa27.66■■■□□ 2.02
R3HDM4-201ENST00000361574 RNF20Q5VTR2 975 aa27.66■■■□□ 2.02
R3HDM4-201ENST00000361574 JAKMIP1Q96N16 626 aaKnown RBP27.66■■■□□ 2.02
R3HDM4-201ENST00000361574 PLA2G12BQ9BX93 195 aa27.66■■■□□ 2.02
R3HDM4-201ENST00000361574 ROBO1Q9Y6N7 1651 aa27.66■■■□□ 2.02
R3HDM4-201ENST00000361574 BCL9O00512 1426 aa27.65■■■□□ 2.02
R3HDM4-201ENST00000361574 SLC27A2O14975 620 aa27.65■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms