RNA–Protein interactions for RNA: ENST00000361490.8

HPS1-204, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS1, Length 3,678 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-204ENST00000361490 VPS37DQ86XT2 251 aa14.04□□□□□ -0.16
HPS1-204ENST00000361490 MED1Q15648 1581 aaPredicted RBP14.03□□□□□ -0.16
HPS1-204ENST00000361490 SASH1O94885 1247 aa14.03□□□□□ -0.16
HPS1-204ENST00000361490 IFIT1P09914 478 aaKnown RBP14.03□□□□□ -0.16
HPS1-204ENST00000361490 RABEP1Q15276 862 aa14.03□□□□□ -0.16
HPS1-204ENST00000361490 CCDC158Q5M9N0 1113 aa14.03□□□□□ -0.16
HPS1-204ENST00000361490 USP26Q9BXU7 913 aa14.03□□□□□ -0.16
HPS1-204ENST00000361490 CHMP5Q9NZZ3 219 aa14.03□□□□□ -0.16
HPS1-204ENST00000361490 ZNF142P52746 1687 aaPredicted RBP14.03□□□□□ -0.16
HPS1-204ENST00000361490 IDH1O75874 414 aaKnown RBP14.03□□□□□ -0.16
HPS1-204ENST00000361490 FAM227BQ96M60 508 aa14.03□□□□□ -0.16
HPS1-204ENST00000361490 NCAPD2Q15021 1401 aa14.03□□□□□ -0.16
HPS1-204ENST00000361490 GOLGA6L22H0YM25 854 aa14.03□□□□□ -0.16
HPS1-204ENST00000361490 KDM4AO75164 1064 aa14.03□□□□□ -0.16
HPS1-204ENST00000361490 CD2BP2O95400 341 aaKnown RBP14.03□□□□□ -0.16
HPS1-204ENST00000361490 STK3Q13188 491 aa14.03□□□□□ -0.16
HPS1-204ENST00000361490 JAKMIP1Q96N16 626 aaKnown RBP14.03□□□□□ -0.16
HPS1-204ENST00000361490 GNPATO15228 680 aa14.02□□□□□ -0.16
HPS1-204ENST00000361490 CCDC191Q8NCU4 936 aa14.02□□□□□ -0.16
HPS1-204ENST00000361490 COL5A2P05997 1499 aaPredicted RBP14.02□□□□□ -0.16
HPS1-204ENST00000361490 SNAP23O00161 211 aa14.02□□□□□ -0.17
HPS1-204ENST00000361490 ZPR1O75312 459 aa14.02□□□□□ -0.17
HPS1-204ENST00000361490 CRKLP46109 303 aaKnown RBP14.02□□□□□ -0.17
HPS1-204ENST00000361490 HSPA1LP34931 641 aa14.02□□□□□ -0.17
HPS1-204ENST00000361490 ANKRD18BA2A2Z9 1011 aa14.01□□□□□ -0.17
HPS1-204ENST00000361490 CASTP20810 708 aaKnown RBP14.01□□□□□ -0.17
HPS1-204ENST00000361490 TAF5LO75529 589 aa14.01□□□□□ -0.17
HPS1-204ENST00000361490 SLFNL1Q499Z3 407 aa14.01□□□□□ -0.17
HPS1-204ENST00000361490 CCDC129Q6ZRS4 1044 aa14.01□□□□□ -0.17
HPS1-204ENST00000361490 KAZALD1Q96I82 304 aa14.01□□□□□ -0.17
HPS1-204ENST00000361490 CCDC87Q9NVE4 849 aa14.01□□□□□ -0.17
HPS1-204ENST00000361490 NWD1Q149M9 1564 aa14.01□□□□□ -0.17
HPS1-204ENST00000361490 ITGA6P23229 1130 aa14.01□□□□□ -0.17
HPS1-204ENST00000361490 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.01□□□□□ -0.17
HPS1-204ENST00000361490 TNNI3KQ59H18 835 aa14□□□□□ -0.17
HPS1-204ENST00000361490 PTF1AQ7RTS3 328 aa14□□□□□ -0.17
HPS1-204ENST00000361490 PALD1Q9ULE6 856 aa14□□□□□ -0.17
HPS1-204ENST00000361490 FPGT-TNNI3KV9GXZ4 949 aa14□□□□□ -0.17
HPS1-204ENST00000361490 CHGBP05060 677 aa14□□□□□ -0.17
HPS1-204ENST00000361490 NMIQ13287 307 aaPredicted RBP14□□□□□ -0.17
HPS1-204ENST00000361490 POLA2Q14181 598 aa14□□□□□ -0.17
HPS1-204ENST00000361490 RGPD2P0DJD1 1756 aa14□□□□□ -0.17
HPS1-204ENST00000361490 A0A1B0GUL7 405 aa14□□□□□ -0.17
HPS1-204ENST00000361490 PTPN12Q05209 780 aaKnown RBP14□□□□□ -0.17
HPS1-204ENST00000361490 ABCF2Q9UG63 623 aa14□□□□□ -0.17
HPS1-204ENST00000361490 CCNL1Q9UK58 526 aaPredicted RBP14□□□□□ -0.17
HPS1-204ENST00000361490 EVI5LQ96CN4 794 aa13.99□□□□□ -0.17
HPS1-204ENST00000361490 GREM2Q9H772 168 aa13.99□□□□□ -0.17
HPS1-204ENST00000361490 OVOS2A0A0G2JMS6 1433 aa13.99□□□□□ -0.17
HPS1-204ENST00000361490 SEC62Q99442 399 aaKnown RBP13.99□□□□□ -0.17
HPS1-204ENST00000361490 JAG2Q9Y219 1238 aa13.99□□□□□ -0.17
HPS1-204ENST00000361490 CDCA7Q9BWT1 371 aaPredicted RBP13.98□□□□□ -0.17
HPS1-204ENST00000361490 DBNLQ9UJU6 430 aaKnown RBP13.98□□□□□ -0.17
HPS1-204ENST00000361490 SPATA31A1Q5TZJ5 1347 aa13.98□□□□□ -0.17
HPS1-204ENST00000361490 EYA2O00167 538 aa13.98□□□□□ -0.17
HPS1-204ENST00000361490 CHMP4CQ96CF2 233 aa13.98□□□□□ -0.17
HPS1-204ENST00000361490 LRRC2Q9BYS8 371 aa13.98□□□□□ -0.17
HPS1-204ENST00000361490 CYP19A1P11511 503 aaPredicted RBP13.97□□□□□ -0.17
HPS1-204ENST00000361490 HAND2P61296 217 aa13.97□□□□□ -0.17
HPS1-204ENST00000361490 GIGYF2Q6Y7W6 1299 aaKnown RBP13.97□□□□□ -0.17
HPS1-204ENST00000361490 ZGPATQ8N5A5 531 aaKnown RBP13.97□□□□□ -0.17
HPS1-204ENST00000361490 GBP4Q96PP9 640 aa13.97□□□□□ -0.17
HPS1-204ENST00000361490 QTRT2Q9H974 415 aaKnown RBP13.97□□□□□ -0.17
HPS1-204ENST00000361490 MAP3K15Q6ZN16 1313 aa13.97□□□□□ -0.17
HPS1-204ENST00000361490 RFC4P35249 363 aa13.97□□□□□ -0.17
HPS1-204ENST00000361490 IGHMBP2P38935 993 aaKnown RBP13.97□□□□□ -0.17
HPS1-204ENST00000361490 IL15P40933 162 aaPredicted RBP13.97□□□□□ -0.17
HPS1-204ENST00000361490 MCTP1Q6DN14 999 aa13.97□□□□□ -0.17
HPS1-204ENST00000361490 PI16Q6UXB8 463 aa13.97□□□□□ -0.17
HPS1-204ENST00000361490 NBPF5PQ86XG9 351 aaPredicted RBP13.97□□□□□ -0.17
HPS1-204ENST00000361490 AK7Q96M32 723 aa13.97□□□□□ -0.17
HPS1-204ENST00000361490 SLC4A9Q96Q91 983 aa13.97□□□□□ -0.17
HPS1-204ENST00000361490 ZNF652Q9Y2D9 606 aa13.97□□□□□ -0.17
HPS1-204ENST00000361490 RBM25P49756 843 aaKnown RBP13.96□□□□□ -0.17
HPS1-204ENST00000361490 ATP2B3Q16720 1220 aa13.96□□□□□ -0.17
HPS1-204ENST00000361490 UTP14AQ9BVJ6 771 aaKnown RBP13.96□□□□□ -0.17
HPS1-204ENST00000361490 VPS37CA5D8V6 355 aaPredicted RBP13.96□□□□□ -0.17
HPS1-204ENST00000361490 RNF20Q5VTR2 975 aa13.96□□□□□ -0.17
HPS1-204ENST00000361490 SMARCC1Q92922 1105 aaPredicted RBP13.96□□□□□ -0.17
HPS1-204ENST00000361490 IL25Q9H293 177 aa13.96□□□□□ -0.17
HPS1-204ENST00000361490 SEC31BQ9NQW1 1179 aa13.96□□□□□ -0.17
HPS1-204ENST00000361490 SRP68Q9UHB9 627 aaKnown RBP13.96□□□□□ -0.17
HPS1-204ENST00000361490 WWC3Q9ULE0 1092 aa13.96□□□□□ -0.17
HPS1-204ENST00000361490 SLIT3O75094 1523 aa13.96□□□□□ -0.17
HPS1-204ENST00000361490 SSFA2P28290 1259 aa13.96□□□□□ -0.18
HPS1-204ENST00000361490 ADORA1P30542 326 aa13.96□□□□□ -0.18
HPS1-204ENST00000361490 FBXW7Q969H0 707 aa13.96□□□□□ -0.18
HPS1-204ENST00000361490 NLRP10Q86W26 655 aa13.95□□□□□ -0.18
HPS1-204ENST00000361490 PI4K2BQ8TCG2 481 aa13.95□□□□□ -0.18
HPS1-204ENST00000361490 AFF2P51816 1311 aa13.95□□□□□ -0.18
HPS1-204ENST00000361490 SH3TC1Q8TE82 1336 aa13.95□□□□□ -0.18
HPS1-204ENST00000361490 TRIM37O94972 964 aa13.95□□□□□ -0.18
HPS1-204ENST00000361490 PTH1RQ03431 593 aa13.95□□□□□ -0.18
HPS1-204ENST00000361490 CHAF1AQ13111 956 aaPredicted RBP13.95□□□□□ -0.18
HPS1-204ENST00000361490 NKX1-1Q15270 411 aaPredicted RBP13.95□□□□□ -0.18
HPS1-204ENST00000361490 RBM8AQ9Y5S9 174 aaKnown RBP13.95□□□□□ -0.18
HPS1-204ENST00000361490 TTC41PQ6P2S7 1318 aa13.94□□□□□ -0.18
HPS1-204ENST00000361490 ITPK1Q13572 414 aa13.94□□□□□ -0.18
HPS1-204ENST00000361490 ZBTB38Q8NAP3 1195 aaPredicted RBP13.94□□□□□ -0.18
HPS1-204ENST00000361490 CERKQ8TCT0 537 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms