RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 NFATC2IPQ8NCF5 419 aa15.67■□□□□ 0.1
LDB3-202ENST00000361373 PIBF1Q8WXW3 757 aa15.67■□□□□ 0.1
LDB3-202ENST00000361373 NIP7Q9Y221 180 aaKnown RBP eCLIP15.67■□□□□ 0.1
LDB3-202ENST00000361373 IARSP41252 1262 aaKnown RBP15.67■□□□□ 0.1
LDB3-202ENST00000361373 CARD14Q9BXL6 1004 aa15.67■□□□□ 0.1
LDB3-202ENST00000361373 RTCBQ9Y3I0 505 aaKnown RBP15.67■□□□□ 0.1
LDB3-202ENST00000361373 DESP17661 470 aa15.67■□□□□ 0.1
LDB3-202ENST00000361373 TMEM67Q5HYA8 995 aa15.67■□□□□ 0.1
LDB3-202ENST00000361373 TSPY2A6NKD2 308 aa15.67■□□□□ 0.1
LDB3-202ENST00000361373 TRIM21P19474 475 aaKnown RBP15.67■□□□□ 0.1
LDB3-202ENST00000361373 DZIP3Q86Y13 1208 aaKnown RBP15.67■□□□□ 0.1
LDB3-202ENST00000361373 KRT23Q9C075 422 aa15.67■□□□□ 0.1
LDB3-202ENST00000361373 CNNM2Q9H8M5 875 aa15.67■□□□□ 0.1
LDB3-202ENST00000361373 SNRKQ9NRH2 765 aa15.67■□□□□ 0.1
LDB3-202ENST00000361373 ANO10Q9NW15 660 aa15.67■□□□□ 0.1
LDB3-202ENST00000361373 ZRANB1Q9UGI0 708 aa15.67■□□□□ 0.1
LDB3-202ENST00000361373 FGFR1OPO95684 399 aaKnown RBP15.67■□□□□ 0.1
LDB3-202ENST00000361373 FERMT3Q86UX7 667 aa15.67■□□□□ 0.1
LDB3-202ENST00000361373 RNMTO43148 476 aaKnown RBP15.66■□□□□ 0.1
LDB3-202ENST00000361373 NLRP5P59047 1200 aa15.66■□□□□ 0.1
LDB3-202ENST00000361373 CABLES1Q8TDN4 633 aa15.66■□□□□ 0.1
LDB3-202ENST00000361373 KAT14Q9H8E8 782 aa15.66■□□□□ 0.1
LDB3-202ENST00000361373 COL17A1Q9UMD9 1497 aaPredicted RBP15.66■□□□□ 0.1
LDB3-202ENST00000361373 VAMP4O75379 141 aa15.66■□□□□ 0.1
LDB3-202ENST00000361373 MCM5P33992 734 aa15.66■□□□□ 0.1
LDB3-202ENST00000361373 ANAPC15P60006 121 aa15.66■□□□□ 0.1
LDB3-202ENST00000361373 NOM1Q5C9Z4 860 aaKnown RBP15.66■□□□□ 0.1
LDB3-202ENST00000361373 PPP4R3AQ6IN85 833 aa15.66■□□□□ 0.1
LDB3-202ENST00000361373 ARHGEF10O15013 1369 aa15.66■□□□□ 0.1
LDB3-202ENST00000361373 HDAC9Q9UKV0 1011 aa15.66■□□□□ 0.1
LDB3-202ENST00000361373 BAG4O95429 457 aaKnown RBP15.66■□□□□ 0.1
LDB3-202ENST00000361373 TTC41PQ6P2S7 1318 aa15.66■□□□□ 0.1
LDB3-202ENST00000361373 ERLIN2O94905 339 aa15.65■□□□□ 0.1
LDB3-202ENST00000361373 TTLL5Q6EMB2 1281 aa15.65■□□□□ 0.1
LDB3-202ENST00000361373 DDX21Q9NR30 783 aaKnown RBP eCLIP15.65■□□□□ 0.1
LDB3-202ENST00000361373 USP16Q9Y5T5 823 aa15.65■□□□□ 0.1
LDB3-202ENST00000361373 ACSBG1Q96GR2 724 aa15.65■□□□□ 0.1
LDB3-202ENST00000361373 GRPEL1Q9HAV7 217 aa15.65■□□□□ 0.1
LDB3-202ENST00000361373 TMEM2Q9UHN6 1383 aa15.65■□□□□ 0.1
LDB3-202ENST00000361373 PDE1AP54750 535 aa15.65■□□□□ 0.1
LDB3-202ENST00000361373 FEZ1Q99689 392 aa15.64■□□□□ 0.09
LDB3-202ENST00000361373 TSG101Q99816 390 aa15.64■□□□□ 0.09
LDB3-202ENST00000361373 SAMD9Q5K651 1589 aa15.64■□□□□ 0.09
LDB3-202ENST00000361373 GNAQP50148 359 aa15.64■□□□□ 0.09
LDB3-202ENST00000361373 ZNF804AQ7Z570 1209 aa15.64■□□□□ 0.09
LDB3-202ENST00000361373 EIF5P55010 431 aaKnown RBP15.64■□□□□ 0.09
LDB3-202ENST00000361373 CCDC183Q5T5S1 534 aa15.64■□□□□ 0.09
LDB3-202ENST00000361373 ZNF397Q8NF99 534 aaPredicted RBP15.64■□□□□ 0.09
LDB3-202ENST00000361373 ESR2Q92731 530 aa15.63■□□□□ 0.09
LDB3-202ENST00000361373 ANKRD2Q9GZV1 360 aa15.63■□□□□ 0.09
LDB3-202ENST00000361373 KRI1Q8N9T8 703 aaKnown RBP15.63■□□□□ 0.09
LDB3-202ENST00000361373 DDX19AQ9NUU7 478 aaKnown RBP15.63■□□□□ 0.09
LDB3-202ENST00000361373 PER1O15534 1290 aaPredicted RBP15.63■□□□□ 0.09
LDB3-202ENST00000361373 PLCG2P16885 1265 aa15.63■□□□□ 0.09
LDB3-202ENST00000361373 GNAT2P19087 354 aa15.63■□□□□ 0.09
LDB3-202ENST00000361373 SPC24Q8NBT2 197 aa15.63■□□□□ 0.09
LDB3-202ENST00000361373 MAP7D2Q96T17 732 aa15.63■□□□□ 0.09
LDB3-202ENST00000361373 PLEKHG3A1L390 1219 aa15.63■□□□□ 0.09
LDB3-202ENST00000361373 POTEJP0CG39 1038 aa15.63■□□□□ 0.09
LDB3-202ENST00000361373 METAP2P50579 478 aaKnown RBP eCLIP15.63■□□□□ 0.09
LDB3-202ENST00000361373 BMP15O95972 392 aa15.62■□□□□ 0.09
LDB3-202ENST00000361373 MCMDC2Q4G0Z9 681 aa15.62■□□□□ 0.09
LDB3-202ENST00000361373 CFAP74Q9C0B2 1584 aa15.62■□□□□ 0.09
LDB3-202ENST00000361373 TTLL12Q14166 644 aaPredicted RBP15.62■□□□□ 0.09
LDB3-202ENST00000361373 OGFOD1Q8N543 542 aa15.62■□□□□ 0.09
LDB3-202ENST00000361373 TCP11L1Q9NUJ3 509 aa15.62■□□□□ 0.09
LDB3-202ENST00000361373 ORC3Q9UBD5 711 aaPredicted RBP15.62■□□□□ 0.09
LDB3-202ENST00000361373 AMPD3Q01432 767 aa15.62■□□□□ 0.09
LDB3-202ENST00000361373 PARP10Q53GL7 1025 aa15.62■□□□□ 0.09
LDB3-202ENST00000361373 NBPF14Q5TI25 921 aa15.62■□□□□ 0.09
LDB3-202ENST00000361373 ZNF219Q9P2Y4 722 aaPredicted RBP15.62■□□□□ 0.09
LDB3-202ENST00000361373 ZFYVE16Q7Z3T8 1539 aa15.62■□□□□ 0.09
LDB3-202ENST00000361373 CYP7A1P22680 504 aa15.62■□□□□ 0.09
LDB3-202ENST00000361373 NBPF7P0C2Y1 421 aaPredicted RBP15.61■□□□□ 0.09
LDB3-202ENST00000361373 IQCEQ6IPM2 695 aa15.61■□□□□ 0.09
LDB3-202ENST00000361373 ZSCAN16Q9H4T2 348 aaPredicted RBP15.61■□□□□ 0.09
LDB3-202ENST00000361373 BTG4Q9NY30 223 aa15.61■□□□□ 0.09
LDB3-202ENST00000361373 IGHDP01880 384 aa15.61■□□□□ 0.09
LDB3-202ENST00000361373 NAA16Q6N069 864 aaPredicted RBP15.61■□□□□ 0.09
LDB3-202ENST00000361373 LRRC27Q9C0I9 530 aa15.61■□□□□ 0.09
LDB3-202ENST00000361373 SDSP20132 328 aa15.61■□□□□ 0.09
LDB3-202ENST00000361373 FKBP15Q5T1M5 1219 aa15.61■□□□□ 0.09
LDB3-202ENST00000361373 CCDC181Q5TID7 509 aa15.61■□□□□ 0.09
LDB3-202ENST00000361373 KANK3Q6NY19 840 aa15.61■□□□□ 0.09
LDB3-202ENST00000361373 MPHOSPH6Q99547 160 aaKnown RBP15.61■□□□□ 0.09
LDB3-202ENST00000361373 DCTPP1Q9H773 170 aa15.61■□□□□ 0.09
LDB3-202ENST00000361373 RBM27Q9P2N5 1060 aaKnown RBP15.61■□□□□ 0.09
LDB3-202ENST00000361373 WTAPQ15007 396 aa15.6■□□□□ 0.09
LDB3-202ENST00000361373 EYA3Q99504 573 aa15.6■□□□□ 0.09
LDB3-202ENST00000361373 IRS4O14654 1257 aaPredicted RBP15.6■□□□□ 0.09
LDB3-202ENST00000361373 CAVIN2O95810 425 aa15.6■□□□□ 0.09
LDB3-202ENST00000361373 MATR3P43243 847 aaKnown RBP eCLIP15.6■□□□□ 0.09
LDB3-202ENST00000361373 CFAP100Q494V2 611 aa15.6■□□□□ 0.09
LDB3-202ENST00000361373 PAF1Q8N7H5 531 aa15.6■□□□□ 0.09
LDB3-202ENST00000361373 STX6O43752 255 aa15.6■□□□□ 0.09
LDB3-202ENST00000361373 CCDC82Q8N4S0 544 aa15.6■□□□□ 0.09
LDB3-202ENST00000361373 PHACTR3Q96KR7 559 aa15.6■□□□□ 0.09
LDB3-202ENST00000361373 ZC3H12CQ9C0D7 883 aaKnown RBP15.6■□□□□ 0.09
LDB3-202ENST00000361373 EPB41L2O43491 1005 aaKnown RBP15.6■□□□□ 0.09
LDB3-202ENST00000361373 TBC1D32Q96NH3 1257 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms