RNA–Protein interactions for RNA: ENST00000361115.4

CCL28-201, Transcript of C-C motif chemokine ligand 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL28, Length 3,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-201ENST00000361115 INTS5Q6P9B9 1019 aaKnown RBP9.68□□□□□ -0.86
CCL28-201ENST00000361115 MTHFSP49914 203 aa9.67□□□□□ -0.86
CCL28-201ENST00000361115 CYP19A1P11511 503 aaPredicted RBP9.67□□□□□ -0.86
CCL28-201ENST00000361115 CDK11BP21127 795 aaKnown RBP9.67□□□□□ -0.86
CCL28-201ENST00000361115 MAP2K2P36507 400 aa9.67□□□□□ -0.86
CCL28-201ENST00000361115 CCDC93Q567U6 631 aa9.67□□□□□ -0.86
CCL28-201ENST00000361115 SPRYD3Q8NCJ5 442 aa9.67□□□□□ -0.86
CCL28-201ENST00000361115 MASTLQ96GX5 879 aa9.67□□□□□ -0.86
CCL28-201ENST00000361115 TAOK3Q9H2K8 898 aa9.67□□□□□ -0.86
CCL28-201ENST00000361115 HTATSF1O43719 755 aaKnown RBP9.67□□□□□ -0.86
CCL28-201ENST00000361115 MMP14P50281 582 aa9.67□□□□□ -0.86
CCL28-201ENST00000361115 PSMD1Q99460 953 aa9.67□□□□□ -0.86
CCL28-201ENST00000361115 TBC1D2Q9BYX2 928 aa9.67□□□□□ -0.86
CCL28-201ENST00000361115 SAGE1Q9NXZ1 904 aa9.67□□□□□ -0.86
CCL28-201ENST00000361115 MCM4P33991 863 aa9.66□□□□□ -0.86
CCL28-201ENST00000361115 C2CD5Q86YS7 1000 aa9.66□□□□□ -0.86
CCL28-201ENST00000361115 BBXQ8WY36 941 aaPredicted RBP9.66□□□□□ -0.86
CCL28-201ENST00000361115 WBP1LQ9NX94 342 aa9.66□□□□□ -0.86
CCL28-201ENST00000361115 MYCNP04198 464 aaPredicted RBP9.66□□□□□ -0.86
CCL28-201ENST00000361115 SERPINB2P05120 415 aa9.66□□□□□ -0.86
CCL28-201ENST00000361115 FKBP4Q02790 459 aaKnown RBP eCLIP9.66□□□□□ -0.86
CCL28-201ENST00000361115 COL13A1Q5TAT6 717 aaPredicted RBP9.66□□□□□ -0.86
CCL28-201ENST00000361115 ZNF526Q8TF50 670 aaPredicted RBP9.66□□□□□ -0.86
CCL28-201ENST00000361115 LAMB1P07942 1786 aa9.65□□□□□ -0.86
CCL28-201ENST00000361115 USHBP1Q8N6Y0 703 aa9.65□□□□□ -0.86
CCL28-201ENST00000361115 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.65□□□□□ -0.86
CCL28-201ENST00000361115 GAS2L2Q8NHY3 880 aa9.65□□□□□ -0.86
CCL28-201ENST00000361115 LTBP1Q14766 1721 aa9.65□□□□□ -0.86
CCL28-201ENST00000361115 EIF5P55010 431 aaKnown RBP9.65□□□□□ -0.86
CCL28-201ENST00000361115 RBM42Q9BTD8 480 aaKnown RBP9.65□□□□□ -0.86
CCL28-201ENST00000361115 EMILIN1Q9Y6C2 1016 aa9.65□□□□□ -0.86
CCL28-201ENST00000361115 HEG1Q9ULI3 1381 aa9.65□□□□□ -0.87
CCL28-201ENST00000361115 ZNF521Q96K83 1311 aa9.65□□□□□ -0.87
CCL28-201ENST00000361115 ESPNB1AK53 854 aa9.65□□□□□ -0.87
CCL28-201ENST00000361115 BCAR3O75815 825 aa9.65□□□□□ -0.87
CCL28-201ENST00000361115 NPR1P16066 1061 aa9.65□□□□□ -0.87
CCL28-201ENST00000361115 ALDH1B1P30837 517 aa9.65□□□□□ -0.87
CCL28-201ENST00000361115 TMC4Q7Z404 712 aa9.65□□□□□ -0.87
CCL28-201ENST00000361115 SLC4A9Q96Q91 983 aa9.65□□□□□ -0.87
CCL28-201ENST00000361115 USP50Q70EL3 339 aaPredicted RBP9.64□□□□□ -0.87
CCL28-201ENST00000361115 HACL1Q9UJ83 578 aa9.64□□□□□ -0.87
CCL28-201ENST00000361115 CEMIPQ8WUJ3 1361 aa9.64□□□□□ -0.87
CCL28-201ENST00000361115 ANKRD36CQ5JPF3 1778 aa9.64□□□□□ -0.87
CCL28-201ENST00000361115 AMIGO3Q86WK7 504 aa9.64□□□□□ -0.87
CCL28-201ENST00000361115 SUPT20HQ8NEM7 779 aa9.64□□□□□ -0.87
CCL28-201ENST00000361115 GCC1Q96CN9 775 aa9.64□□□□□ -0.87
CCL28-201ENST00000361115 PANK3Q9H999 370 aa9.64□□□□□ -0.87
CCL28-201ENST00000361115 LRRC37AA6NMS7 1700 aa9.64□□□□□ -0.87
CCL28-201ENST00000361115 TRAK2O60296 914 aa9.63□□□□□ -0.87
CCL28-201ENST00000361115 GOLGA2Q08379 1002 aa9.63□□□□□ -0.87
CCL28-201ENST00000361115 NFIXQ14938 502 aa9.63□□□□□ -0.87
CCL28-201ENST00000361115 GPC2Q8N158 579 aa9.63□□□□□ -0.87
CCL28-201ENST00000361115 CARD14Q9BXL6 1004 aa9.63□□□□□ -0.87
CCL28-201ENST00000361115 NYXQ9GZU5 481 aa9.63□□□□□ -0.87
CCL28-201ENST00000361115 NFKBIEO00221 500 aa9.63□□□□□ -0.87
CCL28-201ENST00000361115 RNMTO43148 476 aaKnown RBP9.63□□□□□ -0.87
CCL28-201ENST00000361115 MRE11P49959 708 aa9.63□□□□□ -0.87
CCL28-201ENST00000361115 KCNQ4P56696 695 aa9.63□□□□□ -0.87
CCL28-201ENST00000361115 SPINK5Q9NQ38 1064 aaPredicted RBP9.63□□□□□ -0.87
CCL28-201ENST00000361115 SNED1Q8TER0 1413 aa9.63□□□□□ -0.87
CCL28-201ENST00000361115 ECM2O94769 699 aaPredicted RBP9.62□□□□□ -0.87
CCL28-201ENST00000361115 SLFN5Q08AF3 891 aa9.62□□□□□ -0.87
CCL28-201ENST00000361115 ZC3H15Q8WU90 426 aaKnown RBP9.62□□□□□ -0.87
CCL28-201ENST00000361115 GRPEL1Q9HAV7 217 aa9.62□□□□□ -0.87
CCL28-201ENST00000361115 CAPN2P17655 700 aa9.62□□□□□ -0.87
CCL28-201ENST00000361115 NOM1Q5C9Z4 860 aaKnown RBP9.62□□□□□ -0.87
CCL28-201ENST00000361115 TBC1D32Q96NH3 1257 aa9.62□□□□□ -0.87
CCL28-201ENST00000361115 COL3A1P02461 1466 aaPredicted RBP9.62□□□□□ -0.87
CCL28-201ENST00000361115 HSPA8P11142 646 aaKnown RBP9.62□□□□□ -0.87
CCL28-201ENST00000361115 IL13P35225 146 aa9.62□□□□□ -0.87
CCL28-201ENST00000361115 MYH16Q9H6N6 1097 aa9.62□□□□□ -0.87
CCL28-201ENST00000361115 TAF1DQ9H5J8 278 aaPredicted RBP9.61□□□□□ -0.87
CCL28-201ENST00000361115 KDM3BQ7LBC6 1761 aa9.61□□□□□ -0.87
CCL28-201ENST00000361115 POTECB2RU33 542 aa9.61□□□□□ -0.87
CCL28-201ENST00000361115 TTC5Q8N0Z6 440 aa9.61□□□□□ -0.87
CCL28-201ENST00000361115 MAPK8IP3Q9UPT6 1336 aa9.61□□□□□ -0.87
CCL28-201ENST00000361115 RBBP6Q7Z6E9 1792 aaKnown RBP9.61□□□□□ -0.87
CCL28-201ENST00000361115 FZD9O00144 591 aa9.6□□□□□ -0.87
CCL28-201ENST00000361115 BRPF1P55201 1214 aaPredicted RBP9.6□□□□□ -0.87
CCL28-201ENST00000361115 USPL1Q5W0Q7 1092 aa9.6□□□□□ -0.87
CCL28-201ENST00000361115 LAMB2P55268 1798 aa9.6□□□□□ -0.87
CCL28-201ENST00000361115 ERFEQ4G0M1 354 aa9.6□□□□□ -0.87
CCL28-201ENST00000361115 TRMT2AQ8IZ69 625 aaKnown RBP9.6□□□□□ -0.87
CCL28-201ENST00000361115 FMNL2Q96PY5 1086 aa9.6□□□□□ -0.87
CCL28-201ENST00000361115 PGAP2Q9UHJ9 254 aa9.6□□□□□ -0.87
CCL28-201ENST00000361115 NAP1L2Q9ULW6 460 aaPredicted RBP9.6□□□□□ -0.87
CCL28-201ENST00000361115 MLLT1Q03111 559 aaPredicted RBP9.6□□□□□ -0.87
CCL28-201ENST00000361115 BEGAINQ9BUH8 593 aa9.6□□□□□ -0.87
CCL28-201ENST00000361115 PDCL3Q9H2J4 239 aa9.6□□□□□ -0.87
CCL28-201ENST00000361115 ERVV-1B6SEH8 477 aa9.59□□□□□ -0.87
CCL28-201ENST00000361115 TPM2P07951 284 aa9.59□□□□□ -0.87
CCL28-201ENST00000361115 CNBD1Q8NA66 436 aa9.59□□□□□ -0.87
CCL28-201ENST00000361115 BABAM1Q9NWV8 329 aa9.59□□□□□ -0.87
CCL28-201ENST00000361115 SRGNP10124 158 aa9.59□□□□□ -0.87
CCL28-201ENST00000361115 WDR43Q15061 677 aaKnown RBP eCLIP9.59□□□□□ -0.87
CCL28-201ENST00000361115 DEFB115Q30KQ5 88 aa9.59□□□□□ -0.87
CCL28-201ENST00000361115 CCDC146Q8IYE0 955 aa9.59□□□□□ -0.87
CCL28-201ENST00000361115 PANK1Q8TE04 598 aa9.59□□□□□ -0.87
CCL28-201ENST00000361115 C7orf43Q8WVR3 580 aa9.59□□□□□ -0.87
CCL28-201ENST00000361115 PRDM4Q9UKN5 801 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms