RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 ANO10Q9NW15 660 aa5.66□□□□□ -1.5
SCN3A-202ENST00000360093 KDM4AO75164 1064 aa5.66□□□□□ -1.5
SCN3A-202ENST00000360093 LRRC27Q9C0I9 530 aa5.66□□□□□ -1.5
SCN3A-202ENST00000360093 RANBP6O60518 1105 aaKnown RBP5.65□□□□□ -1.5
SCN3A-202ENST00000360093 BAG4O95429 457 aaKnown RBP5.65□□□□□ -1.5
SCN3A-202ENST00000360093 CABP5Q9NP86 173 aa5.65□□□□□ -1.5
SCN3A-202ENST00000360093 GOLIM4O00461 696 aa5.65□□□□□ -1.5
SCN3A-202ENST00000360093 BMP15O95972 392 aa5.65□□□□□ -1.5
SCN3A-202ENST00000360093 HOXC9P31274 260 aa5.65□□□□□ -1.5
SCN3A-202ENST00000360093 MCM5P33992 734 aa5.65□□□□□ -1.5
SCN3A-202ENST00000360093 AMPD3Q01432 767 aa5.65□□□□□ -1.5
SCN3A-202ENST00000360093 CCDC183Q5T5S1 534 aa5.65□□□□□ -1.5
SCN3A-202ENST00000360093 TPTE2Q6XPS3 522 aa5.65□□□□□ -1.5
SCN3A-202ENST00000360093 NEK1Q96PY6 1258 aa5.65□□□□□ -1.5
SCN3A-202ENST00000360093 ZHX3Q9H4I2 956 aa5.65□□□□□ -1.5
SCN3A-202ENST00000360093 POTEJP0CG39 1038 aa5.65□□□□□ -1.5
SCN3A-202ENST00000360093 BRPF1P55201 1214 aaPredicted RBP5.65□□□□□ -1.5
SCN3A-202ENST00000360093 C20orf194Q5TEA3 1177 aa5.65□□□□□ -1.5
SCN3A-202ENST00000360093 CCDC83Q8IWF9 413 aa5.65□□□□□ -1.5
SCN3A-202ENST00000360093 XAGE3Q8WTP9 111 aa5.65□□□□□ -1.5
SCN3A-202ENST00000360093 TSG101Q99816 390 aa5.65□□□□□ -1.5
SCN3A-202ENST00000360093 UTP14AQ9BVJ6 771 aaKnown RBP5.65□□□□□ -1.5
SCN3A-202ENST00000360093 TANGO6Q9C0B7 1094 aa5.65□□□□□ -1.5
SCN3A-202ENST00000360093 PDCL3Q9H2J4 239 aa5.65□□□□□ -1.5
SCN3A-202ENST00000360093 SPINK5Q9NQ38 1064 aaPredicted RBP5.65□□□□□ -1.5
SCN3A-202ENST00000360093 GNAQP50148 359 aa5.65□□□□□ -1.5
SCN3A-202ENST00000360093 COPS6Q7L5N1 327 aa5.65□□□□□ -1.5
SCN3A-202ENST00000360093 LMTK3Q96Q04 1460 aa5.65□□□□□ -1.51
SCN3A-202ENST00000360093 KIF2AO00139 706 aaPredicted RBP5.65□□□□□ -1.51
SCN3A-202ENST00000360093 TBC1D9Q6ZT07 1266 aa5.65□□□□□ -1.51
SCN3A-202ENST00000360093 RBM27Q9P2N5 1060 aaKnown RBP5.65□□□□□ -1.51
SCN3A-202ENST00000360093 RTCBQ9Y3I0 505 aaKnown RBP5.65□□□□□ -1.51
SCN3A-202ENST00000360093 TMEM2Q9UHN6 1383 aa5.65□□□□□ -1.51
SCN3A-202ENST00000360093 SBNO2Q9Y2G9 1366 aa5.65□□□□□ -1.51
SCN3A-202ENST00000360093 ATP2B3Q16720 1220 aa5.65□□□□□ -1.51
SCN3A-202ENST00000360093 MTHFSDQ2M296 383 aaKnown RBP5.65□□□□□ -1.51
SCN3A-202ENST00000360093 ANKRD2Q9GZV1 360 aa5.65□□□□□ -1.51
SCN3A-202ENST00000360093 KAT14Q9H8E8 782 aa5.65□□□□□ -1.51
SCN3A-202ENST00000360093 NCKAP5LQ9HCH0 1330 aa5.65□□□□□ -1.51
SCN3A-202ENST00000360093 MLH3Q9UHC1 1453 aa5.65□□□□□ -1.51
SCN3A-202ENST00000360093 CCDC194A0A1B0GVG4 234 aa5.64□□□□□ -1.51
SCN3A-202ENST00000360093 ATP5J2-PTCD1G3V325 749 aa5.64□□□□□ -1.51
SCN3A-202ENST00000360093 PLCG2P16885 1265 aa5.64□□□□□ -1.51
SCN3A-202ENST00000360093 GRPEL1Q9HAV7 217 aa5.64□□□□□ -1.51
SCN3A-202ENST00000360093 GOLGA8BA8MQT2 603 aa5.64□□□□□ -1.51
SCN3A-202ENST00000360093 ZNF804AQ7Z570 1209 aa5.64□□□□□ -1.51
SCN3A-202ENST00000360093 CERS3Q8IU89 383 aa5.64□□□□□ -1.51
SCN3A-202ENST00000360093 BCL11BQ9C0K0 894 aaPredicted RBP5.64□□□□□ -1.51
SCN3A-202ENST00000360093 GOLGA8AA7E2F4 631 aa5.64□□□□□ -1.51
SCN3A-202ENST00000360093 IARSP41252 1262 aaKnown RBP5.64□□□□□ -1.51
SCN3A-202ENST00000360093 MCMDC2Q4G0Z9 681 aa5.64□□□□□ -1.51
SCN3A-202ENST00000360093 TMEM67Q5HYA8 995 aa5.64□□□□□ -1.51
SCN3A-202ENST00000360093 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.64□□□□□ -1.51
SCN3A-202ENST00000360093 HDAC9Q9UKV0 1011 aa5.64□□□□□ -1.51
SCN3A-202ENST00000360093 RNMTO43148 476 aaKnown RBP5.64□□□□□ -1.51
SCN3A-202ENST00000360093 NLRP5P59047 1200 aa5.64□□□□□ -1.51
SCN3A-202ENST00000360093 SAMD9LQ8IVG5 1584 aa5.64□□□□□ -1.51
SCN3A-202ENST00000360093 STXBP4Q6ZWJ1 553 aa5.64□□□□□ -1.51
SCN3A-202ENST00000360093 NFATC2IPQ8NCF5 419 aa5.64□□□□□ -1.51
SCN3A-202ENST00000360093 ESR2Q92731 530 aa5.64□□□□□ -1.51
SCN3A-202ENST00000360093 DDX19AQ9NUU7 478 aaKnown RBP5.64□□□□□ -1.51
SCN3A-202ENST00000360093 EFCAB6Q5THR3 1501 aa5.64□□□□□ -1.51
SCN3A-202ENST00000360093 NOM1Q5C9Z4 860 aaKnown RBP5.64□□□□□ -1.51
SCN3A-202ENST00000360093 DZIP3Q86Y13 1208 aaKnown RBP5.64□□□□□ -1.51
SCN3A-202ENST00000360093 EYA1Q99502 592 aa5.64□□□□□ -1.51
SCN3A-202ENST00000360093 TCP11L1Q9NUJ3 509 aa5.64□□□□□ -1.51
SCN3A-202ENST00000360093 TSPY2A6NKD2 308 aa5.64□□□□□ -1.51
SCN3A-202ENST00000360093 VAMP4O75379 141 aa5.64□□□□□ -1.51
SCN3A-202ENST00000360093 CCDC96Q2M329 555 aa5.64□□□□□ -1.51
SCN3A-202ENST00000360093 PARP10Q53GL7 1025 aa5.64□□□□□ -1.51
SCN3A-202ENST00000360093 FKBP15Q5T1M5 1219 aa5.64□□□□□ -1.51
SCN3A-202ENST00000360093 DDX11Q96FC9 970 aa5.64□□□□□ -1.51
SCN3A-202ENST00000360093 MAP3K19Q56UN5 1328 aa5.64□□□□□ -1.51
SCN3A-202ENST00000360093 ZMYM4Q5VZL5 1548 aa5.63□□□□□ -1.51
SCN3A-202ENST00000360093 SSBP05455 408 aaKnown RBP eCLIP5.63□□□□□ -1.51
SCN3A-202ENST00000360093 NBPF7P0C2Y1 421 aaPredicted RBP5.63□□□□□ -1.51
SCN3A-202ENST00000360093 CALML4Q96GE6 196 aa5.63□□□□□ -1.51
SCN3A-202ENST00000360093 CARD14Q9BXL6 1004 aa5.63□□□□□ -1.51
SCN3A-202ENST00000360093 DDX21Q9NR30 783 aaKnown RBP eCLIP5.63□□□□□ -1.51
SCN3A-202ENST00000360093 NIP7Q9Y221 180 aaKnown RBP eCLIP5.63□□□□□ -1.51
SCN3A-202ENST00000360093 METAP2P50579 478 aaKnown RBP eCLIP5.63□□□□□ -1.51
SCN3A-202ENST00000360093 CALM1P0DP23 149 aa5.63□□□□□ -1.51
SCN3A-202ENST00000360093 CALM2P0DP24 149 aa5.63□□□□□ -1.51
SCN3A-202ENST00000360093 CALM3P0DP25 149 aa5.63□□□□□ -1.51
SCN3A-202ENST00000360093 PDE1AP54750 535 aa5.63□□□□□ -1.51
SCN3A-202ENST00000360093 CCDC181Q5TID7 509 aa5.63□□□□□ -1.51
SCN3A-202ENST00000360093 OGFOD1Q8N543 542 aa5.63□□□□□ -1.51
SCN3A-202ENST00000360093 DCTPP1Q9H773 170 aa5.63□□□□□ -1.51
SCN3A-202ENST00000360093 RTL1A6NKG5 1358 aa5.63□□□□□ -1.51
SCN3A-202ENST00000360093 PLEKHG3A1L390 1219 aa5.63□□□□□ -1.51
SCN3A-202ENST00000360093 PER1O15534 1290 aaPredicted RBP5.63□□□□□ -1.51
SCN3A-202ENST00000360093 VPS36Q86VN1 386 aa5.63□□□□□ -1.51
SCN3A-202ENST00000360093 KRI1Q8N9T8 703 aaKnown RBP5.63□□□□□ -1.51
SCN3A-202ENST00000360093 C8orf58Q8NAV2 365 aa5.63□□□□□ -1.51
SCN3A-202ENST00000360093 TET3O43151 1660 aa5.63□□□□□ -1.51
SCN3A-202ENST00000360093 RAD50Q92878 1312 aa5.63□□□□□ -1.51
SCN3A-202ENST00000360093 CCDC148Q8NFR7 591 aa5.63□□□□□ -1.51
SCN3A-202ENST00000360093 MEIS3Q99687 375 aa5.63□□□□□ -1.51
SCN3A-202ENST00000360093 CETN2P41208 172 aa5.63□□□□□ -1.51
SCN3A-202ENST00000360093 EIF5P55010 431 aaKnown RBP5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms