RNA–Protein interactions for RNA: ENST00000359513.8

ATG13-201, Transcript of autophagy related 13, humanhuman

TSL 1 (best) BASIC

Gene ATG13, Length 4,348 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-201ENST00000359513 NAP1L5Q96NT1 182 aaPredicted RBP10.15□□□□□ -0.78
ATG13-201ENST00000359513 PANK2Q9BZ23 570 aa10.15□□□□□ -0.78
ATG13-201ENST00000359513 NYXQ9GZU5 481 aa10.15□□□□□ -0.78
ATG13-201ENST00000359513 CLTCL1P53675 1640 aa10.15□□□□□ -0.79
ATG13-201ENST00000359513 SHROOM2Q13796 1616 aa10.15□□□□□ -0.79
ATG13-201ENST00000359513 ATP7BP35670 1465 aa10.15□□□□□ -0.79
ATG13-201ENST00000359513 ERBB3P21860 1342 aa10.15□□□□□ -0.79
ATG13-201ENST00000359513 CRACR2BQ8N4Y2 399 aaPredicted RBP10.15□□□□□ -0.79
ATG13-201ENST00000359513 DDX11Q96FC9 970 aa10.15□□□□□ -0.79
ATG13-201ENST00000359513 QTRT2Q9H974 415 aaKnown RBP10.15□□□□□ -0.79
ATG13-201ENST00000359513 KDM5AP29375 1690 aaKnown RBP10.15□□□□□ -0.79
ATG13-201ENST00000359513 SH3TC1Q8TE82 1336 aa10.14□□□□□ -0.79
ATG13-201ENST00000359513 RANBP6O60518 1105 aaKnown RBP10.14□□□□□ -0.79
ATG13-201ENST00000359513 FAM182BQ5T319 152 aa10.14□□□□□ -0.79
ATG13-201ENST00000359513 NBPF14Q5TI25 921 aa10.14□□□□□ -0.79
ATG13-201ENST00000359513 TBC1D2Q9BYX2 928 aa10.14□□□□□ -0.79
ATG13-201ENST00000359513 CCDC87Q9NVE4 849 aa10.14□□□□□ -0.79
ATG13-201ENST00000359513 UQCRFS1P1P0C7P4 283 aa10.14□□□□□ -0.79
ATG13-201ENST00000359513 MCM4P33991 863 aa10.14□□□□□ -0.79
ATG13-201ENST00000359513 TTF1Q15361 905 aaPredicted RBP10.14□□□□□ -0.79
ATG13-201ENST00000359513 CCDC24Q8N4L8 307 aa10.14□□□□□ -0.79
ATG13-201ENST00000359513 CCDC43Q96MW1 224 aaKnown RBP10.14□□□□□ -0.79
ATG13-201ENST00000359513 IGSF1Q8N6C5 1336 aa10.14□□□□□ -0.79
ATG13-201ENST00000359513 PRPF40AO75400 957 aaKnown RBP10.14□□□□□ -0.79
ATG13-201ENST00000359513 LDHCP07864 332 aa10.14□□□□□ -0.79
ATG13-201ENST00000359513 HAND2P61296 217 aa10.14□□□□□ -0.79
ATG13-201ENST00000359513 CCAR1Q8IX12 1150 aaKnown RBP10.14□□□□□ -0.79
ATG13-201ENST00000359513 CCDC47Q96A33 483 aaKnown RBP10.14□□□□□ -0.79
ATG13-201ENST00000359513 ZSCAN31Q96LW9 406 aaPredicted RBP10.14□□□□□ -0.79
ATG13-201ENST00000359513 PLEKHF1Q96S99 279 aa10.14□□□□□ -0.79
ATG13-201ENST00000359513 MPHOSPH10O00566 681 aaKnown RBP10.14□□□□□ -0.79
ATG13-201ENST00000359513 NBPF7P0C2Y1 421 aaPredicted RBP10.14□□□□□ -0.79
ATG13-201ENST00000359513 CCDC82Q8N4S0 544 aa10.14□□□□□ -0.79
ATG13-201ENST00000359513 KLHDC4Q8TBB5 520 aa10.14□□□□□ -0.79
ATG13-201ENST00000359513 LARP6Q9BRS8 491 aaKnown RBP10.14□□□□□ -0.79
ATG13-201ENST00000359513 APBA3O96018 575 aa10.13□□□□□ -0.79
ATG13-201ENST00000359513 STK38Q15208 465 aa10.13□□□□□ -0.79
ATG13-201ENST00000359513 HOOK1Q9UJC3 728 aaKnown RBP10.13□□□□□ -0.79
ATG13-201ENST00000359513 PARP3Q9Y6F1 533 aa10.13□□□□□ -0.79
ATG13-201ENST00000359513 SPATA31A3Q5VYP0 1347 aa10.13□□□□□ -0.79
ATG13-201ENST00000359513 WDR17Q8IZU2 1322 aa10.13□□□□□ -0.79
ATG13-201ENST00000359513 CCDC191Q8NCU4 936 aa10.13□□□□□ -0.79
ATG13-201ENST00000359513 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.13□□□□□ -0.796e-7■■□□□ 12.6
ATG13-201ENST00000359513 MRE11P49959 708 aa10.13□□□□□ -0.79
ATG13-201ENST00000359513 TIMM10P62072 90 aa10.13□□□□□ -0.79
ATG13-201ENST00000359513 ASAP1Q9ULH1 1129 aa10.13□□□□□ -0.79
ATG13-201ENST00000359513 TFCP2Q12800 502 aa10.12□□□□□ -0.79
ATG13-201ENST00000359513 SMC5Q8IY18 1101 aa10.12□□□□□ -0.79
ATG13-201ENST00000359513 ZNF444Q8N0Y2 327 aaPredicted RBP10.12□□□□□ -0.79
ATG13-201ENST00000359513 ZC3H12CQ9C0D7 883 aaKnown RBP10.12□□□□□ -0.79
ATG13-201ENST00000359513 ZNF287Q9HBT7 754 aa10.12□□□□□ -0.79
ATG13-201ENST00000359513 SASS6Q6UVJ0 657 aa10.12□□□□□ -0.79
ATG13-201ENST00000359513 CCDC83Q8IWF9 413 aa10.12□□□□□ -0.79
ATG13-201ENST00000359513 SLF2Q8IX21 1173 aa10.12□□□□□ -0.79
ATG13-201ENST00000359513 TRPC5Q9UL62 973 aaPredicted RBP10.12□□□□□ -0.79
ATG13-201ENST00000359513 ERBB4Q15303 1308 aa10.12□□□□□ -0.79
ATG13-201ENST00000359513 SYNMO15061 1565 aa10.12□□□□□ -0.79
ATG13-201ENST00000359513 CNBD1Q8NA66 436 aa10.12□□□□□ -0.79
ATG13-201ENST00000359513 F8W031 263 aaPredicted RBP10.11□□□□□ -0.79
ATG13-201ENST00000359513 SLC4A8Q2Y0W8 1093 aa10.11□□□□□ -0.79
ATG13-201ENST00000359513 PARP10Q53GL7 1025 aa10.11□□□□□ -0.79
ATG13-201ENST00000359513 SOGA3Q5TF21 947 aa10.11□□□□□ -0.79
ATG13-201ENST00000359513 WDR33Q9C0J8 1336 aaKnown RBP10.11□□□□□ -0.79
ATG13-201ENST00000359513 BAG3O95817 575 aa10.11□□□□□ -0.79
ATG13-201ENST00000359513 GCKRQ14397 625 aa10.11□□□□□ -0.79
ATG13-201ENST00000359513 SLC9C2Q5TAH2 1124 aa10.11□□□□□ -0.79
ATG13-201ENST00000359513 FERMT3Q86UX7 667 aa10.11□□□□□ -0.79
ATG13-201ENST00000359513 IQCA1Q86XH1 822 aa10.11□□□□□ -0.79
ATG13-201ENST00000359513 UNC13BO14795 1591 aa10.11□□□□□ -0.79
ATG13-201ENST00000359513 DIP2CQ9Y2E4 1556 aa10.11□□□□□ -0.79
ATG13-201ENST00000359513 CDKL5O76039 1030 aa10.11□□□□□ -0.79
ATG13-201ENST00000359513 CYP7A1P22680 504 aa10.11□□□□□ -0.79
ATG13-201ENST00000359513 SPTY2D1Q68D10 685 aaPredicted RBP10.11□□□□□ -0.79
ATG13-201ENST00000359513 STK32BQ9NY57 414 aa10.11□□□□□ -0.79
ATG13-201ENST00000359513 AXIN2Q9Y2T1 843 aa10.11□□□□□ -0.79
ATG13-201ENST00000359513 TTLL7Q6ZT98 887 aa10.11□□□□□ -0.79
ATG13-201ENST00000359513 ZNF594Q96JF6 807 aaPredicted RBP10.11□□□□□ -0.79
ATG13-201ENST00000359513 ZNF396Q96N95 335 aaPredicted RBP10.11□□□□□ -0.79
ATG13-201ENST00000359513 IFIT3O14879 490 aaKnown RBP10.1□□□□□ -0.79
ATG13-201ENST00000359513 ADGRL3Q9HAR2 1447 aa10.1□□□□□ -0.79
ATG13-201ENST00000359513 NCOA3Q9Y6Q9 1424 aa10.1□□□□□ -0.79
ATG13-201ENST00000359513 ALKQ9UM73 1620 aa10.1□□□□□ -0.79
ATG13-201ENST00000359513 IQGAP1P46940 1657 aa10.1□□□□□ -0.79
ATG13-201ENST00000359513 EYA2O00167 538 aa10.1□□□□□ -0.79
ATG13-201ENST00000359513 TRAK2O60296 914 aa10.1□□□□□ -0.79
ATG13-201ENST00000359513 ITGA6P23229 1130 aa10.1□□□□□ -0.79
ATG13-201ENST00000359513 CAVIN1Q6NZI2 390 aaKnown RBP10.1□□□□□ -0.79
ATG13-201ENST00000359513 SUCLG2Q96I99 432 aa10.1□□□□□ -0.79
ATG13-201ENST00000359513 RNF41Q9H4P4 317 aaPredicted RBP10.1□□□□□ -0.79
ATG13-201ENST00000359513 MYOM1P52179 1685 aa10.1□□□□□ -0.79
ATG13-201ENST00000359513 LOC102724428A0A0B4J2F2 783 aa10.09□□□□□ -0.79
ATG13-201ENST00000359513 ESPNB1AK53 854 aa10.09□□□□□ -0.79
ATG13-201ENST00000359513 KINO60870 393 aaKnown RBP10.09□□□□□ -0.79
ATG13-201ENST00000359513 SIK1P57059 783 aa10.09□□□□□ -0.79
ATG13-201ENST00000359513 JAG2Q9Y219 1238 aa10.09□□□□□ -0.79
ATG13-201ENST00000359513 PNMA6EA0A0J9YXQ4 647 aa10.09□□□□□ -0.79
ATG13-201ENST00000359513 RIMBP2O15034 1052 aa10.09□□□□□ -0.79
ATG13-201ENST00000359513 POLD1P28340 1107 aa10.09□□□□□ -0.79
ATG13-201ENST00000359513 DDIT3P35638 169 aa10.09□□□□□ -0.79
ATG13-201ENST00000359513 ME1P48163 572 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms