RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 STARD3NLO95772 234 aa13.35□□□□□ -0.27
TRAPPC4-201ENST00000359005 CHRNA5P30532 468 aa13.35□□□□□ -0.27
TRAPPC4-201ENST00000359005 TGFB2P61812 414 aa13.35□□□□□ -0.27
TRAPPC4-201ENST00000359005 RIC3Q7Z5B4 369 aa13.35□□□□□ -0.27
TRAPPC4-201ENST00000359005 CHD1LQ86WJ1 897 aa13.35□□□□□ -0.27
TRAPPC4-201ENST00000359005 PI4KAP1Q8N8J0 262 aa13.35□□□□□ -0.27
TRAPPC4-201ENST00000359005 BACH2Q9BYV9 841 aa13.35□□□□□ -0.27
TRAPPC4-201ENST00000359005 PHAXQ9H814 394 aaKnown RBP13.35□□□□□ -0.27
TRAPPC4-201ENST00000359005 UPF2Q9HAU5 1272 aaKnown RBP13.35□□□□□ -0.27
TRAPPC4-201ENST00000359005 TBC1D2BQ9UPU7 963 aa13.35□□□□□ -0.27
TRAPPC4-201ENST00000359005 ZNF831Q5JPB2 1677 aa13.34□□□□□ -0.27
TRAPPC4-201ENST00000359005 TJP1Q07157 1748 aa13.34□□□□□ -0.27
TRAPPC4-201ENST00000359005 C10orf71Q711Q0 1435 aa13.34□□□□□ -0.27
TRAPPC4-201ENST00000359005 ZPR1O75312 459 aa13.34□□□□□ -0.27
TRAPPC4-201ENST00000359005 HSP90AB4PQ58FF6 505 aa13.34□□□□□ -0.27
TRAPPC4-201ENST00000359005 NPM2Q86SE8 214 aaKnown RBP13.34□□□□□ -0.27
TRAPPC4-201ENST00000359005 LINS1Q8NG48 757 aa13.34□□□□□ -0.27
TRAPPC4-201ENST00000359005 DCTPP1Q9H773 170 aa13.34□□□□□ -0.27
TRAPPC4-201ENST00000359005 C9orf78Q9NZ63 289 aaPredicted RBP13.34□□□□□ -0.27
TRAPPC4-201ENST00000359005 COL15A1P39059 1388 aa13.33□□□□□ -0.27
TRAPPC4-201ENST00000359005 COL5A3P25940 1745 aaPredicted RBP13.33□□□□□ -0.27
TRAPPC4-201ENST00000359005 UBR2Q8IWV8 1755 aa13.33□□□□□ -0.28
TRAPPC4-201ENST00000359005 CICQ96RK0 1608 aaPredicted RBP13.33□□□□□ -0.28
TRAPPC4-201ENST00000359005 NBPF26B4DH59 902 aa13.33□□□□□ -0.28
TRAPPC4-201ENST00000359005 ANKRD45Q5TZF3 282 aa13.33□□□□□ -0.28
TRAPPC4-201ENST00000359005 CEP85Q6P2H3 762 aa13.33□□□□□ -0.28
TRAPPC4-201ENST00000359005 NBPF10Q6P3W6 841 aaKnown RBP13.33□□□□□ -0.28
TRAPPC4-201ENST00000359005 NBPF15Q8N660 670 aa13.33□□□□□ -0.28
TRAPPC4-201ENST00000359005 MEIS3Q99687 375 aa13.33□□□□□ -0.28
TRAPPC4-201ENST00000359005 BCS1LQ9Y276 419 aa13.33□□□□□ -0.28
TRAPPC4-201ENST00000359005 MAP3K2Q9Y2U5 619 aa13.33□□□□□ -0.28
TRAPPC4-201ENST00000359005 BEND3Q5T5X7 828 aa13.32□□□□□ -0.28
TRAPPC4-201ENST00000359005 BICDL1Q6ZP65 573 aa13.32□□□□□ -0.28
TRAPPC4-201ENST00000359005 ANKRD13DQ6ZTN6 518 aa13.32□□□□□ -0.28
TRAPPC4-201ENST00000359005 CCDC24Q8N4L8 307 aa13.32□□□□□ -0.28
TRAPPC4-201ENST00000359005 C1orf115Q9H7X2 142 aa13.32□□□□□ -0.28
TRAPPC4-201ENST00000359005 CAMTA2O94983 1202 aa13.31□□□□□ -0.28
TRAPPC4-201ENST00000359005 SERPINB2P05120 415 aa13.31□□□□□ -0.28
TRAPPC4-201ENST00000359005 ATP8B2P98198 1209 aa13.31□□□□□ -0.28
TRAPPC4-201ENST00000359005 TBC1D9BQ66K14 1250 aa13.31□□□□□ -0.28
TRAPPC4-201ENST00000359005 ZNF330Q9Y3S2 320 aaPredicted RBP13.31□□□□□ -0.28
TRAPPC4-201ENST00000359005 RAB11FIP3O75154 756 aa13.3□□□□□ -0.28
TRAPPC4-201ENST00000359005 MYL6BP14649 208 aa13.3□□□□□ -0.28
TRAPPC4-201ENST00000359005 IL6STP40189 918 aaPredicted RBP13.3□□□□□ -0.28
TRAPPC4-201ENST00000359005 USP44Q9H0E7 712 aa13.3□□□□□ -0.28
TRAPPC4-201ENST00000359005 AIMP1Q12904 312 aaKnown RBP13.29□□□□□ -0.28
TRAPPC4-201ENST00000359005 COPS6Q7L5N1 327 aa13.29□□□□□ -0.28
TRAPPC4-201ENST00000359005 PLBD2Q8NHP8 589 aa13.29□□□□□ -0.28
TRAPPC4-201ENST00000359005 XAGE3Q8WTP9 111 aa13.29□□□□□ -0.28
TRAPPC4-201ENST00000359005 METTL22Q9BUU2 404 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC4-201ENST00000359005 ADCY9O60503 1353 aa13.29□□□□□ -0.28
TRAPPC4-201ENST00000359005 CARMIL3Q8ND23 1372 aa13.29□□□□□ -0.28
TRAPPC4-201ENST00000359005 PDIA6Q15084 440 aa13.28□□□□□ -0.28
TRAPPC4-201ENST00000359005 KIF6Q6ZMV9 814 aa13.28□□□□□ -0.28
TRAPPC4-201ENST00000359005 ARHGAP27Q6ZUM4 889 aa13.28□□□□□ -0.28
TRAPPC4-201ENST00000359005 ERC1Q8IUD2 1116 aa13.28□□□□□ -0.28
TRAPPC4-201ENST00000359005 ZNF526Q8TF50 670 aaPredicted RBP13.28□□□□□ -0.28
TRAPPC4-201ENST00000359005 DDRGK1Q96HY6 314 aa13.28□□□□□ -0.28
TRAPPC4-201ENST00000359005 LRRFIP2Q9Y608 721 aaKnown RBP13.28□□□□□ -0.28
TRAPPC4-201ENST00000359005 CEP350Q5VT06 3117 aa13.27□□□□□ -0.28
TRAPPC4-201ENST00000359005 A0A087WZG4 1122 aa13.27□□□□□ -0.29
TRAPPC4-201ENST00000359005 GRM8O00222 908 aa13.27□□□□□ -0.29
TRAPPC4-201ENST00000359005 CASC1Q6TDU7 716 aa13.27□□□□□ -0.29
TRAPPC4-201ENST00000359005 SIRT2Q8IXJ6 389 aa13.27□□□□□ -0.29
TRAPPC4-201ENST00000359005 LRRCC1Q9C099 1032 aa13.27□□□□□ -0.29
TRAPPC4-201ENST00000359005 LNPKQ9C0E8 428 aa13.27□□□□□ -0.29
TRAPPC4-201ENST00000359005 PIM2Q9P1W9 311 aa13.27□□□□□ -0.29
TRAPPC4-201ENST00000359005 UTYO14607 1347 aa13.26□□□□□ -0.29
TRAPPC4-201ENST00000359005 ANXA1P04083 346 aa13.26□□□□□ -0.29
TRAPPC4-201ENST00000359005 C4AP0C0L4 1744 aa13.26□□□□□ -0.29
TRAPPC4-201ENST00000359005 PRELPP51888 382 aa13.26□□□□□ -0.29
TRAPPC4-201ENST00000359005 C1QTNF8P60827 252 aa13.26□□□□□ -0.29
TRAPPC4-201ENST00000359005 MTX1Q13505 466 aa13.26□□□□□ -0.29
TRAPPC4-201ENST00000359005 HSP90AB3PQ58FF7 597 aa13.26□□□□□ -0.29
TRAPPC4-201ENST00000359005 DALRD3Q5D0E6 543 aaKnown RBP13.26□□□□□ -0.29
TRAPPC4-201ENST00000359005 BMP2KLQ5H9B9 411 aa13.26□□□□□ -0.29
TRAPPC4-201ENST00000359005 DZIP3Q86Y13 1208 aaKnown RBP13.26□□□□□ -0.29
TRAPPC4-201ENST00000359005 KIAA1551Q9HCM1 1747 aa13.25□□□□□ -0.29
TRAPPC4-201ENST00000359005 HLFQ16534 295 aa13.25□□□□□ -0.29
TRAPPC4-201ENST00000359005 PROSER3Q2NL68 480 aa13.25□□□□□ -0.29
TRAPPC4-201ENST00000359005 PRR5LQ6MZQ0 368 aa13.25□□□□□ -0.29
TRAPPC4-201ENST00000359005 SSH3Q8TE77 659 aa13.25□□□□□ -0.29
TRAPPC4-201ENST00000359005 SRGAP3O43295 1099 aa13.24□□□□□ -0.29
TRAPPC4-201ENST00000359005 C8orf34Q49A92 452 aa13.24□□□□□ -0.29
TRAPPC4-201ENST00000359005 C2CD5Q86YS7 1000 aa13.24□□□□□ -0.29
TRAPPC4-201ENST00000359005 MYD88Q99836 296 aa13.24□□□□□ -0.29
TRAPPC4-201ENST00000359005 NEURL1BA8MQ27 555 aa13.23□□□□□ -0.29
TRAPPC4-201ENST00000359005 OS9Q13438 667 aaPredicted RBP13.23□□□□□ -0.29
TRAPPC4-201ENST00000359005 POLA2Q14181 598 aa13.23□□□□□ -0.29
TRAPPC4-201ENST00000359005 GCKRQ14397 625 aa13.23□□□□□ -0.29
TRAPPC4-201ENST00000359005 TTLL7Q6ZT98 887 aa13.23□□□□□ -0.29
TRAPPC4-201ENST00000359005 PPP1R42Q7Z4L9 355 aa13.23□□□□□ -0.29
TRAPPC4-201ENST00000359005 CCDC191Q8NCU4 936 aa13.23□□□□□ -0.29
TRAPPC4-201ENST00000359005 KIF1BPQ96EK5 621 aa13.23□□□□□ -0.29
TRAPPC4-201ENST00000359005 DAXXQ9UER7 740 aaPredicted RBP13.23□□□□□ -0.29
TRAPPC4-201ENST00000359005 NBPF7P0C2Y1 421 aaPredicted RBP13.22□□□□□ -0.29
TRAPPC4-201ENST00000359005 HSP90B1P14625 803 aaKnown RBP13.22□□□□□ -0.29
TRAPPC4-201ENST00000359005 C9orf131Q5VYM1 1079 aa13.22□□□□□ -0.29
TRAPPC4-201ENST00000359005 LRP10Q7Z4F1 713 aa13.22□□□□□ -0.29
TRAPPC4-201ENST00000359005 GPATCH3Q96I76 525 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms