RNA–Protein interactions for RNA: ENST00000357325.9

HDGF-201, Transcript of heparin binding growth factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGF, Length 2,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGF-201ENST00000357325 NEXNQ0ZGT2 675 aa30.06■■■□□ 2.4
HDGF-201ENST00000357325 ANKRD13DQ6ZTN6 518 aa30.06■■■□□ 2.4
HDGF-201ENST00000357325 NDUFB9Q9Y6M9 179 aa30.06■■■□□ 2.4
HDGF-201ENST00000357325 TCHHQ07283 1943 aa30.06■■■□□ 2.4
HDGF-201ENST00000357325 A0A0D9SFI3 127 aa30.06■■■□□ 2.4
HDGF-201ENST00000357325 RUFY2Q8WXA3 655 aa30.06■■■□□ 2.4
HDGF-201ENST00000357325 TAF6LQ9Y6J9 622 aa30.06■■■□□ 2.4
HDGF-201ENST00000357325 LMTK3Q96Q04 1460 aa30.06■■■□□ 2.4
HDGF-201ENST00000357325 CCDC173Q0VFZ6 552 aa30.05■■■□□ 2.4
HDGF-201ENST00000357325 NECTIN1Q15223 517 aa30.05■■■□□ 2.4
HDGF-201ENST00000357325 USP48Q86UV5 1035 aa30.05■■■□□ 2.4
HDGF-201ENST00000357325 HDAC5Q9UQL6 1122 aa30.05■■■□□ 2.4
HDGF-201ENST00000357325 CCDC171Q6TFL3 1326 aa30.04■■■□□ 2.4
HDGF-201ENST00000357325 CHGBP05060 677 aa30.04■■■□□ 2.4
HDGF-201ENST00000357325 RBM8AQ9Y5S9 174 aaKnown RBP30.04■■■□□ 2.4
HDGF-201ENST00000357325 ST3GAL1Q11201 340 aa30.04■■■□□ 2.4
HDGF-201ENST00000357325 CCDC83Q8IWF9 413 aa30.04■■■□□ 2.4
HDGF-201ENST00000357325 TTC5Q8N0Z6 440 aa30.04■■■□□ 2.4
HDGF-201ENST00000357325 WDR33Q9C0J8 1336 aaKnown RBP30.03■■■□□ 2.4
HDGF-201ENST00000357325 SNRPA1P09661 255 aaKnown RBP30.03■■■□□ 2.4
HDGF-201ENST00000357325 SYT1P21579 422 aa30.03■■■□□ 2.4
HDGF-201ENST00000357325 LRSAM1Q6UWE0 723 aa30.03■■■□□ 2.4
HDGF-201ENST00000357325 UBE3BQ7Z3V4 1068 aa30.03■■■□□ 2.4
HDGF-201ENST00000357325 PDRG1Q9NUG6 133 aa30.03■■■□□ 2.4
HDGF-201ENST00000357325 DCAF5Q96JK2 942 aa30.02■■■□□ 2.4
HDGF-201ENST00000357325 CNPY2Q9Y2B0 182 aa30.01■■■□□ 2.4
HDGF-201ENST00000357325 CREB3L3Q68CJ9 461 aa30.01■■■□□ 2.39
HDGF-201ENST00000357325 TCEANC2Q96MN5 208 aa30.01■■■□□ 2.39
HDGF-201ENST00000357325 ZSWIM6Q9HCJ5 1215 aa30.01■■■□□ 2.39
HDGF-201ENST00000357325 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.01■■■□□ 2.39
HDGF-201ENST00000357325 RFX5P48382 616 aaPredicted RBP30■■■□□ 2.39
HDGF-201ENST00000357325 FSD1Q9BTV5 496 aa30■■■□□ 2.39
HDGF-201ENST00000357325 ZNF589Q86UQ0 364 aaPredicted RBP30■■■□□ 2.39
HDGF-201ENST00000357325 RNF214Q8ND24 703 aa30■■■□□ 2.39
HDGF-201ENST00000357325 KCNB2Q92953 911 aa30■■■□□ 2.39
HDGF-201ENST00000357325 MBD3O95983 291 aa29.99■■■□□ 2.39
HDGF-201ENST00000357325 PTPN12Q05209 780 aaKnown RBP29.99■■■□□ 2.39
HDGF-201ENST00000357325 NECAB1Q8N987 351 aa29.99■■■□□ 2.39
HDGF-201ENST00000357325 TFCP2Q12800 502 aa29.99■■■□□ 2.39
HDGF-201ENST00000357325 MAP4K1Q92918 833 aa29.99■■■□□ 2.39
HDGF-201ENST00000357325 CABP4P57796 275 aa29.98■■■□□ 2.39
HDGF-201ENST00000357325 ME3Q16798 604 aa29.98■■■□□ 2.39
HDGF-201ENST00000357325 FMNL2Q96PY5 1086 aa29.98■■■□□ 2.39
HDGF-201ENST00000357325 DBNLQ9UJU6 430 aaKnown RBP29.98■■■□□ 2.39
HDGF-201ENST00000357325 STX6O43752 255 aa29.98■■■□□ 2.39
HDGF-201ENST00000357325 ZSCAN22P10073 491 aaPredicted RBP29.98■■■□□ 2.39
HDGF-201ENST00000357325 SMC3Q9UQE7 1217 aa29.98■■■□□ 2.39
HDGF-201ENST00000357325 KCNJ4P48050 445 aa29.97■■■□□ 2.39
HDGF-201ENST00000357325 VPS53Q5VIR6 699 aa29.97■■■□□ 2.39
HDGF-201ENST00000357325 CYP46A1Q9Y6A2 500 aa29.97■■■□□ 2.39
HDGF-201ENST00000357325 TNS3Q68CZ2 1445 aa29.97■■■□□ 2.39
HDGF-201ENST00000357325 SLC27A2O14975 620 aa29.96■■■□□ 2.39
HDGF-201ENST00000357325 GJB2P29033 226 aa29.96■■■□□ 2.39
HDGF-201ENST00000357325 A0A087WZG4 1122 aa29.96■■■□□ 2.39
HDGF-201ENST00000357325 ANP32BQ92688 251 aaKnown RBP29.96■■■□□ 2.39
HDGF-201ENST00000357325 TPCN1Q9ULQ1 816 aa29.96■■■□□ 2.39
HDGF-201ENST00000357325 CCDC9Q9Y3X0 531 aaKnown RBP29.96■■■□□ 2.39
HDGF-201ENST00000357325 SPATA31A3Q5VYP0 1347 aa29.95■■■□□ 2.38
HDGF-201ENST00000357325 MRC1P22897 1456 aa29.95■■■□□ 2.38
HDGF-201ENST00000357325 NBPF26B4DH59 902 aa29.95■■■□□ 2.38
HDGF-201ENST00000357325 HSPA2P54652 639 aa29.95■■■□□ 2.38
HDGF-201ENST00000357325 NBPF14Q5TI25 921 aa29.95■■■□□ 2.38
HDGF-201ENST00000357325 NBPF10Q6P3W6 841 aaKnown RBP29.95■■■□□ 2.38
HDGF-201ENST00000357325 NBPF15Q8N660 670 aa29.95■■■□□ 2.38
HDGF-201ENST00000357325 COPRSQ9NQ92 184 aa29.95■■■□□ 2.38
HDGF-201ENST00000357325 ZSCAN21Q9Y5A6 473 aaPredicted RBP29.95■■■□□ 2.38
HDGF-201ENST00000357325 TM6SF1Q9BZW5 370 aa29.93■■■□□ 2.38
HDGF-201ENST00000357325 COL15A1P39059 1388 aa29.93■■■□□ 2.38
HDGF-201ENST00000357325 TNNI3KQ59H18 835 aa29.93■■■□□ 2.38
HDGF-201ENST00000357325 FPGT-TNNI3KV9GXZ4 949 aa29.93■■■□□ 2.38
HDGF-201ENST00000357325 GLI3P10071 1580 aa29.93■■■□□ 2.38
HDGF-201ENST00000357325 F13A1P00488 732 aa29.92■■■□□ 2.38
HDGF-201ENST00000357325 AFDNP55196 1824 aaKnown RBP29.92■■■□□ 2.38
HDGF-201ENST00000357325 ZKSCAN1P17029 563 aaPredicted RBP29.92■■■□□ 2.38
HDGF-201ENST00000357325 CASP7P55210 303 aa29.92■■■□□ 2.38
HDGF-201ENST00000357325 DBNDD2Q9BQY9 259 aa29.92■■■□□ 2.38
HDGF-201ENST00000357325 TTLL7Q6ZT98 887 aa29.91■■■□□ 2.38
HDGF-201ENST00000357325 MED23Q9ULK4 1368 aa29.91■■■□□ 2.38
HDGF-201ENST00000357325 RABL6Q3YEC7 729 aaPredicted RBP29.91■■■□□ 2.38
HDGF-201ENST00000357325 SNRKQ9NRH2 765 aa29.91■■■□□ 2.38
HDGF-201ENST00000357325 FIBPO43427 364 aa29.9■■■□□ 2.38
HDGF-201ENST00000357325 CADPS2Q86UW7 1296 aa29.9■■■□□ 2.38
HDGF-201ENST00000357325 PDLIM2Q96JY6 352 aa29.9■■■□□ 2.38
HDGF-201ENST00000357325 SEC62Q99442 399 aaKnown RBP29.9■■■□□ 2.38
HDGF-201ENST00000357325 MTMR6Q9Y217 621 aa29.9■■■□□ 2.38
HDGF-201ENST00000357325 ARFGEF2Q9Y6D5 1785 aa29.9■■■□□ 2.38
HDGF-201ENST00000357325 CCDC129Q6ZRS4 1044 aa29.9■■■□□ 2.38
HDGF-201ENST00000357325 NAP1L5Q96NT1 182 aaPredicted RBP29.9■■■□□ 2.38
HDGF-201ENST00000357325 LMBR1LQ6UX01 489 aa29.89■■■□□ 2.38
HDGF-201ENST00000357325 PKD1L3Q7Z443 1732 aa29.89■■■□□ 2.38
HDGF-201ENST00000357325 HIP1O00291 1037 aa29.89■■■□□ 2.37
HDGF-201ENST00000357325 SLFNL1Q499Z3 407 aa29.89■■■□□ 2.37
HDGF-201ENST00000357325 DNAJC2Q99543 621 aaKnown RBP29.88■■■□□ 2.37
HDGF-201ENST00000357325 A1BGP04217 495 aa29.88■■■□□ 2.37
HDGF-201ENST00000357325 DNM1Q05193 864 aaKnown RBP29.88■■■□□ 2.37
HDGF-201ENST00000357325 PLBD2Q8NHP8 589 aa29.88■■■□□ 2.37
HDGF-201ENST00000357325 CHMP3Q9Y3E7 222 aa29.88■■■□□ 2.37
HDGF-201ENST00000357325 TMEM87AQ8NBN3 555 aa29.87■■■□□ 2.37
HDGF-201ENST00000357325 TAF5LO75529 589 aa29.86■■■□□ 2.37
HDGF-201ENST00000357325 ATP5JP18859 108 aa29.86■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms