RNA–Protein interactions for RNA: ENST00000357179.9

TOP3B-201, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 2,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-201ENST00000357179 MTMR6Q9Y217 621 aa17.33■□□□□ 0.36
TOP3B-201ENST00000357179 SOX12O15370 315 aa17.32■□□□□ 0.36
TOP3B-201ENST00000357179 RNF20Q5VTR2 975 aa17.32■□□□□ 0.36
TOP3B-201ENST00000357179 NWD1Q149M9 1564 aa17.32■□□□□ 0.36
TOP3B-201ENST00000357179 TSPOAP1O95153 1857 aa17.32■□□□□ 0.36
TOP3B-201ENST00000357179 CDC25BP30305 580 aa17.32■□□□□ 0.36
TOP3B-201ENST00000357179 PTPN14Q15678 1187 aa17.32■□□□□ 0.36
TOP3B-201ENST00000357179 CCDC144BQ3MJ40 725 aa17.32■□□□□ 0.36
TOP3B-201ENST00000357179 ANO6Q4KMQ2 910 aa17.32■□□□□ 0.36
TOP3B-201ENST00000357179 PPP1R42Q7Z4L9 355 aa17.32■□□□□ 0.36
TOP3B-201ENST00000357179 NUTM1Q86Y26 1132 aa17.32■□□□□ 0.36
TOP3B-201ENST00000357179 CCDC144CPQ8IYA2 1237 aa17.32■□□□□ 0.36
TOP3B-201ENST00000357179 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.32■□□□□ 0.36
TOP3B-201ENST00000357179 CLIP2Q9UDT6 1046 aa17.32■□□□□ 0.36
TOP3B-201ENST00000357179 PIK3C2AO00443 1686 aa17.32■□□□□ 0.36
TOP3B-201ENST00000357179 SURF6O75683 361 aaKnown RBP17.31■□□□□ 0.36
TOP3B-201ENST00000357179 AK2P54819 239 aa17.31■□□□□ 0.36
TOP3B-201ENST00000357179 IRX3P78415 501 aaPredicted RBP17.31■□□□□ 0.36
TOP3B-201ENST00000357179 RAD51AP2Q09MP3 1159 aa17.31■□□□□ 0.36
TOP3B-201ENST00000357179 HSP90AB4PQ58FF6 505 aa17.31■□□□□ 0.36
TOP3B-201ENST00000357179 H2AFXP16104 143 aaPredicted RBP17.31■□□□□ 0.36
TOP3B-201ENST00000357179 RUFY3Q7L099 469 aa17.31■□□□□ 0.36
TOP3B-201ENST00000357179 IL17REQ8NFR9 667 aa17.31■□□□□ 0.36
TOP3B-201ENST00000357179 CHMP4AQ9BY43 222 aa17.31■□□□□ 0.36
TOP3B-201ENST00000357179 USP27XA6NNY8 438 aa17.3■□□□□ 0.36
TOP3B-201ENST00000357179 SLU7O95391 586 aaKnown RBP17.3■□□□□ 0.36
TOP3B-201ENST00000357179 USP54Q70EL1 1684 aa17.3■□□□□ 0.36
TOP3B-201ENST00000357179 TTC41PQ6P2S7 1318 aa17.3■□□□□ 0.36
TOP3B-201ENST00000357179 NUTM2FA1L443 756 aa17.3■□□□□ 0.36
TOP3B-201ENST00000357179 NEMFO60524 1076 aa17.3■□□□□ 0.36
TOP3B-201ENST00000357179 LRRC8AQ8IWT6 810 aa17.3■□□□□ 0.36
TOP3B-201ENST00000357179 TRERF1Q96PN7 1200 aa17.3■□□□□ 0.36
TOP3B-201ENST00000357179 FHOD1Q9Y613 1164 aa17.3■□□□□ 0.36
TOP3B-201ENST00000357179 LIG1P18858 919 aa17.29■□□□□ 0.36
TOP3B-201ENST00000357179 CAMK4Q16566 473 aa17.29■□□□□ 0.36
TOP3B-201ENST00000357179 HDGFL1Q5TGJ6 251 aa17.29■□□□□ 0.36
TOP3B-201ENST00000357179 RBM43Q6ZSC3 357 aaKnown RBP17.29■□□□□ 0.36
TOP3B-201ENST00000357179 ELP1O95163 1332 aa17.29■□□□□ 0.36
TOP3B-201ENST00000357179 HOXB7P09629 217 aa17.29■□□□□ 0.36
TOP3B-201ENST00000357179 TTC6Q86TZ1 520 aa17.29■□□□□ 0.36
TOP3B-201ENST00000357179 NECTIN2Q92692 538 aa17.29■□□□□ 0.36
TOP3B-201ENST00000357179 GJB2P29033 226 aa17.28■□□□□ 0.36
TOP3B-201ENST00000357179 RASEFQ8IZ41 740 aa17.28■□□□□ 0.36
TOP3B-201ENST00000357179 RUFY2Q8WXA3 655 aa17.28■□□□□ 0.36
TOP3B-201ENST00000357179 ZSCAN31Q96LW9 406 aaPredicted RBP17.28■□□□□ 0.36
TOP3B-201ENST00000357179 TM6SF1Q9BZW5 370 aa17.28■□□□□ 0.36
TOP3B-201ENST00000357179 TNMDQ9H2S6 317 aa17.28■□□□□ 0.36
TOP3B-201ENST00000357179 HOXC9P31274 260 aa17.27■□□□□ 0.36
TOP3B-201ENST00000357179 CKAP2LQ8IYA6 745 aa17.27■□□□□ 0.36
TOP3B-201ENST00000357179 KCNB2Q92953 911 aa17.27■□□□□ 0.36
TOP3B-201ENST00000357179 SRGAP3O43295 1099 aa17.27■□□□□ 0.36
TOP3B-201ENST00000357179 GLRX3O76003 335 aaKnown RBP17.27■□□□□ 0.36
TOP3B-201ENST00000357179 NGDNQ8NEJ9 315 aaKnown RBP17.27■□□□□ 0.36
TOP3B-201ENST00000357179 SH2B1Q9NRF2 756 aaPredicted RBP17.27■□□□□ 0.36
TOP3B-201ENST00000357179 KCND1Q9NSA2 647 aa17.27■□□□□ 0.36
TOP3B-201ENST00000357179 DIP2AQ14689 1571 aa17.27■□□□□ 0.35
TOP3B-201ENST00000357179 MUM1L1Q5H9M0 696 aa17.26■□□□□ 0.35
TOP3B-201ENST00000357179 VPS53Q5VIR6 699 aa17.26■□□□□ 0.35
TOP3B-201ENST00000357179 GTF3C6Q969F1 213 aa17.26■□□□□ 0.35
TOP3B-201ENST00000357179 EFCC1Q9HA90 598 aa17.26■□□□□ 0.35
TOP3B-201ENST00000357179 MED1Q15648 1581 aaPredicted RBP17.26■□□□□ 0.35
TOP3B-201ENST00000357179 LARP6Q9BRS8 491 aaKnown RBP17.26■□□□□ 0.35
TOP3B-201ENST00000357179 PHAXQ9H814 394 aaKnown RBP17.26■□□□□ 0.35
TOP3B-201ENST00000357179 HYPKQ9NX55 129 aa17.26■□□□□ 0.35
TOP3B-201ENST00000357179 LTKP29376 864 aa17.26■□□□□ 0.35
TOP3B-201ENST00000357179 ZNF165P49910 485 aa17.26■□□□□ 0.35
TOP3B-201ENST00000357179 KRT85P78386 507 aa17.26■□□□□ 0.35
TOP3B-201ENST00000357179 CYB5RLQ6IPT4 315 aa17.26■□□□□ 0.35
TOP3B-201ENST00000357179 PAXIP1Q6ZW49 1069 aaPredicted RBP17.26■□□□□ 0.35
TOP3B-201ENST00000357179 CEMIPQ8WUJ3 1361 aa17.26■□□□□ 0.35
TOP3B-201ENST00000357179 LARGE1O95461 756 aa17.25■□□□□ 0.35
TOP3B-201ENST00000357179 MAP4K4O95819 1239 aaPredicted RBP17.25■□□□□ 0.35
TOP3B-201ENST00000357179 PLA2G4AP47712 749 aa17.25■□□□□ 0.35
TOP3B-201ENST00000357179 SARM1Q6SZW1 724 aa17.25■□□□□ 0.35
TOP3B-201ENST00000357179 L2HGDHQ9H9P8 463 aa17.25■□□□□ 0.35
TOP3B-201ENST00000357179 DDX19AQ9NUU7 478 aaKnown RBP17.25■□□□□ 0.35
TOP3B-201ENST00000357179 DACT1Q9NYF0 836 aa17.25■□□□□ 0.35
TOP3B-201ENST00000357179 KIF2AO00139 706 aaPredicted RBP17.25■□□□□ 0.35
TOP3B-201ENST00000357179 PNMA6AP0CW24 399 aaPredicted RBP17.25■□□□□ 0.35
TOP3B-201ENST00000357179 SKILP12757 684 aa17.25■□□□□ 0.35
TOP3B-201ENST00000357179 MTX1Q13505 466 aa17.25■□□□□ 0.35
TOP3B-201ENST00000357179 BEND3Q5T5X7 828 aa17.25■□□□□ 0.35
TOP3B-201ENST00000357179 CHMP3Q9Y3E7 222 aa17.25■□□□□ 0.35
TOP3B-201ENST00000357179 MARF1Q9Y4F3 1742 aaKnown RBP17.24■□□□□ 0.35
TOP3B-201ENST00000357179 ANKARQ7Z5J8 1434 aa17.24■□□□□ 0.35
TOP3B-201ENST00000357179 CLCN6P51797 869 aa17.24■□□□□ 0.35
TOP3B-201ENST00000357179 CCAR2Q8N163 923 aaKnown RBP17.24■□□□□ 0.35
TOP3B-201ENST00000357179 MRFAP1L1Q96HT8 127 aa17.24■□□□□ 0.35
TOP3B-201ENST00000357179 ARID5BQ14865 1188 aa17.24■□□□□ 0.35
TOP3B-201ENST00000357179 CCDC83Q8IWF9 413 aa17.24■□□□□ 0.35
TOP3B-201ENST00000357179 DNAAF4Q8WXU2 420 aa17.24■□□□□ 0.35
TOP3B-201ENST00000357179 CLSTN2Q9H4D0 955 aa17.24■□□□□ 0.35
TOP3B-201ENST00000357179 ZSWIM6Q9HCJ5 1215 aa17.24■□□□□ 0.35
TOP3B-201ENST00000357179 VPS37CA5D8V6 355 aaPredicted RBP17.23■□□□□ 0.35
TOP3B-201ENST00000357179 CAVIN2O95810 425 aa17.23■□□□□ 0.35
TOP3B-201ENST00000357179 CASTP20810 708 aaKnown RBP17.23■□□□□ 0.35
TOP3B-201ENST00000357179 CCZ1BP86790 482 aa17.23■□□□□ 0.35
TOP3B-201ENST00000357179 CCZ1P86791 482 aaPredicted RBP17.23■□□□□ 0.35
TOP3B-201ENST00000357179 CWC27Q6UX04 472 aaKnown RBP17.23■□□□□ 0.35
TOP3B-201ENST00000357179 TXLNBQ8N3L3 684 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms