RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 ZGPATQ8N5A5 531 aaKnown RBP6.38□□□□□ -1.39
PTPRD-202ENST00000356435 CRNKL1Q9BZJ0 848 aaKnown RBP6.38□□□□□ -1.39
PTPRD-202ENST00000356435 CCDC113Q9H0I3 377 aa6.38□□□□□ -1.39
PTPRD-202ENST00000356435 ABCC2Q92887 1545 aa6.38□□□□□ -1.39
PTPRD-202ENST00000356435 KDM5DQ9BY66 1539 aa6.38□□□□□ -1.39
PTPRD-202ENST00000356435 MSH6P52701 1360 aa6.38□□□□□ -1.39
PTPRD-202ENST00000356435 SHTN1A0MZ66 631 aa6.38□□□□□ -1.39
PTPRD-202ENST00000356435 ZNF804AQ7Z570 1209 aa6.38□□□□□ -1.39
PTPRD-202ENST00000356435 C8orf76Q96K31 380 aa6.38□□□□□ -1.39
PTPRD-202ENST00000356435 TTC21BQ7Z4L5 1316 aa6.38□□□□□ -1.39
PTPRD-202ENST00000356435 RAPGEF3O95398 923 aa6.38□□□□□ -1.39
PTPRD-202ENST00000356435 DDX11Q96FC9 970 aa6.38□□□□□ -1.39
PTPRD-202ENST00000356435 NUP88Q99567 741 aaPredicted RBP6.38□□□□□ -1.39
PTPRD-202ENST00000356435 TCP11L1Q9NUJ3 509 aa6.38□□□□□ -1.39
PTPRD-202ENST00000356435 IQGAP2Q13576 1575 aa6.37□□□□□ -1.39
PTPRD-202ENST00000356435 LMOD1P29536 600 aaPredicted RBP6.37□□□□□ -1.39
PTPRD-202ENST00000356435 CRACR2AQ9BSW2 395 aa6.37□□□□□ -1.39
PTPRD-202ENST00000356435 SLC12A5Q9H2X9 1139 aa6.37□□□□□ -1.39
PTPRD-202ENST00000356435 PUF60Q9UHX1 559 aaKnown RBP6.37□□□□□ -1.39
PTPRD-202ENST00000356435 ABCC11Q96J66 1382 aa6.37□□□□□ -1.39
PTPRD-202ENST00000356435 SFPQP23246 707 aaKnown RBP eCLIP6.37□□□□□ -1.39
PTPRD-202ENST00000356435 LMAN1P49257 510 aa6.37□□□□□ -1.39
PTPRD-202ENST00000356435 TAF7Q15545 349 aaPredicted RBP6.37□□□□□ -1.39
PTPRD-202ENST00000356435 NBPF14Q5TI25 921 aa6.37□□□□□ -1.39
PTPRD-202ENST00000356435 PSMD1Q99460 953 aa6.37□□□□□ -1.39
PTPRD-202ENST00000356435 IL1RAPL2Q9NP60 686 aa6.37□□□□□ -1.39
PTPRD-202ENST00000356435 NCBP1Q09161 790 aaKnown RBP6.37□□□□□ -1.39
PTPRD-202ENST00000356435 TRMT2AQ8IZ69 625 aaKnown RBP6.37□□□□□ -1.39
PTPRD-202ENST00000356435 CCDC152Q4G0S7 254 aa6.37□□□□□ -1.39
PTPRD-202ENST00000356435 ZNF354CQ86Y25 554 aa6.37□□□□□ -1.39
PTPRD-202ENST00000356435 CCDC117Q8IWD4 279 aaPredicted RBP6.37□□□□□ -1.39
PTPRD-202ENST00000356435 CCDC83Q8IWF9 413 aa6.37□□□□□ -1.39
PTPRD-202ENST00000356435 IKBKGQ9Y6K9 419 aa6.37□□□□□ -1.39
PTPRD-202ENST00000356435 ADGRL1O94910 1474 aa6.37□□□□□ -1.39
PTPRD-202ENST00000356435 TDRD12Q587J7 1177 aaKnown RBP6.37□□□□□ -1.39
PTPRD-202ENST00000356435 RGS22Q8NE09 1264 aa6.37□□□□□ -1.39
PTPRD-202ENST00000356435 DDX23Q9BUQ8 820 aaKnown RBP6.37□□□□□ -1.39
PTPRD-202ENST00000356435 SCAND2PQ9GZW5 306 aaPredicted RBP6.37□□□□□ -1.39
PTPRD-202ENST00000356435 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.37□□□□□ -1.39
PTPRD-202ENST00000356435 TTC12Q9H892 705 aaPredicted RBP6.37□□□□□ -1.39
PTPRD-202ENST00000356435 ZNF213O14771 459 aa6.36□□□□□ -1.39
PTPRD-202ENST00000356435 CCDC61Q9Y6R9 512 aa6.36□□□□□ -1.39
PTPRD-202ENST00000356435 DNAAF4Q8WXU2 420 aa6.36□□□□□ -1.39
PTPRD-202ENST00000356435 WDR70Q9NW82 654 aa6.36□□□□□ -1.39
PTPRD-202ENST00000356435 EIF2AK4Q9P2K8 1649 aaKnown RBP6.36□□□□□ -1.39
PTPRD-202ENST00000356435 OGFOD1Q8N543 542 aa6.36□□□□□ -1.39
PTPRD-202ENST00000356435 ANO10Q9NW15 660 aa6.36□□□□□ -1.39
PTPRD-202ENST00000356435 CWC25Q9NXE8 425 aaPredicted RBP6.36□□□□□ -1.39
PTPRD-202ENST00000356435 IFIT3O14879 490 aaKnown RBP6.36□□□□□ -1.39
PTPRD-202ENST00000356435 TAF12Q16514 161 aa6.36□□□□□ -1.39
PTPRD-202ENST00000356435 CKAP2LQ8IYA6 745 aa6.36□□□□□ -1.39
PTPRD-202ENST00000356435 TBC1D5Q92609 795 aa6.36□□□□□ -1.39
PTPRD-202ENST00000356435 PPP1R9BQ96SB3 815 aa6.36□□□□□ -1.39
PTPRD-202ENST00000356435 WDR62O43379 1518 aa6.36□□□□□ -1.39
PTPRD-202ENST00000356435 CASQ1P31415 396 aa6.36□□□□□ -1.39
PTPRD-202ENST00000356435 UBE4AQ14139 1066 aa6.36□□□□□ -1.39
PTPRD-202ENST00000356435 CD109Q6YHK3 1445 aa6.36□□□□□ -1.39
PTPRD-202ENST00000356435 BBXQ8WY36 941 aaPredicted RBP6.36□□□□□ -1.39
PTPRD-202ENST00000356435 HDAC1Q13547 482 aaPredicted RBP6.36□□□□□ -1.39
PTPRD-202ENST00000356435 RAB3IL1Q8TBN0 382 aa6.36□□□□□ -1.39
PTPRD-202ENST00000356435 NAA15Q9BXJ9 866 aaKnown RBP6.36□□□□□ -1.39
PTPRD-202ENST00000356435 POLR3AO14802 1390 aaPredicted RBP6.36□□□□□ -1.39
PTPRD-202ENST00000356435 POTEB2H3BUK9 544 aa6.36□□□□□ -1.39
PTPRD-202ENST00000356435 C20orf194Q5TEA3 1177 aa6.36□□□□□ -1.39
PTPRD-202ENST00000356435 KLHL10Q6JEL2 608 aa6.36□□□□□ -1.39
PTPRD-202ENST00000356435 MFSD6Q6ZSS7 791 aa6.36□□□□□ -1.39
PTPRD-202ENST00000356435 RBM25P49756 843 aaKnown RBP6.36□□□□□ -1.39
PTPRD-202ENST00000356435 TCERG1LQ5VWI1 586 aa6.36□□□□□ -1.39
PTPRD-202ENST00000356435 MCM10Q7L590 875 aa6.36□□□□□ -1.39
PTPRD-202ENST00000356435 DBF4Q9UBU7 674 aaPredicted RBP6.36□□□□□ -1.39
PTPRD-202ENST00000356435 TSPY2A6NKD2 308 aa6.35□□□□□ -1.39
PTPRD-202ENST00000356435 PRC1O43663 620 aa6.35□□□□□ -1.39
PTPRD-202ENST00000356435 UQCRFS1P1P0C7P4 283 aa6.35□□□□□ -1.39
PTPRD-202ENST00000356435 TMCO3Q6UWJ1 677 aa6.35□□□□□ -1.39
PTPRD-202ENST00000356435 SPATA24Q86W54 205 aa6.35□□□□□ -1.39
PTPRD-202ENST00000356435 MTIF2P46199 727 aaKnown RBP6.35□□□□□ -1.39
PTPRD-202ENST00000356435 JDP2Q8WYK2 163 aa6.35□□□□□ -1.39
PTPRD-202ENST00000356435 SMARCC1Q92922 1105 aaPredicted RBP6.35□□□□□ -1.39
PTPRD-202ENST00000356435 IFI16Q16666 785 aaKnown RBP6.35□□□□□ -1.39
PTPRD-202ENST00000356435 IFNL2Q8IZJ0 200 aa6.35□□□□□ -1.39
PTPRD-202ENST00000356435 OTUD6BQ8N6M0 293 aa6.35□□□□□ -1.39
PTPRD-202ENST00000356435 EHBP1Q8NDI1 1231 aa6.35□□□□□ -1.39
PTPRD-202ENST00000356435 PRIMPOLQ96LW4 560 aa6.35□□□□□ -1.39
PTPRD-202ENST00000356435 TESK2Q96S53 571 aa6.35□□□□□ -1.39
PTPRD-202ENST00000356435 CTTNBP2Q8WZ74 1663 aa6.35□□□□□ -1.39
PTPRD-202ENST00000356435 GOLIM4O00461 696 aa6.35□□□□□ -1.39
PTPRD-202ENST00000356435 TOM1O60784 492 aa6.35□□□□□ -1.39
PTPRD-202ENST00000356435 TOP1P11387 765 aaKnown RBP6.35□□□□□ -1.39
PTPRD-202ENST00000356435 RFX1P22670 979 aa6.35□□□□□ -1.39
PTPRD-202ENST00000356435 ALDH1L2Q3SY69 923 aa6.35□□□□□ -1.39
PTPRD-202ENST00000356435 USHBP1Q8N6Y0 703 aa6.35□□□□□ -1.39
PTPRD-202ENST00000356435 PLVAPQ9BX97 442 aa6.35□□□□□ -1.39
PTPRD-202ENST00000356435 EXOC1Q9NV70 894 aa6.35□□□□□ -1.39
PTPRD-202ENST00000356435 RMND1Q9NWS8 449 aa6.35□□□□□ -1.39
PTPRD-202ENST00000356435 PARP3Q9Y6F1 533 aa6.35□□□□□ -1.39
PTPRD-202ENST00000356435 CTAGE5O15320 804 aa6.35□□□□□ -1.39
PTPRD-202ENST00000356435 TSPY3P0CV98 308 aa6.35□□□□□ -1.39
PTPRD-202ENST00000356435 TSPY8P0CW00 308 aa6.35□□□□□ -1.39
PTPRD-202ENST00000356435 UTP14CQ5TAP6 766 aaKnown RBP6.35□□□□□ -1.39
PTPRD-202ENST00000356435 IMPG2Q9BZV3 1241 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms