RNA–Protein interactions for RNA: ENST00000356384.4

RXRA-201, Transcript of retinoid X receptor alpha, humanhuman

TSL 5

Gene RXRA, Length 5,770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-201ENST00000356384 FAM114A1Q8IWE2 563 aa18.46■□□□□ 0.55
RXRA-201ENST00000356384 IARSP41252 1262 aaKnown RBP18.46■□□□□ 0.55
RXRA-201ENST00000356384 RBM25P49756 843 aaKnown RBP18.46■□□□□ 0.55
RXRA-201ENST00000356384 GNG11P61952 73 aa18.45■□□□□ 0.54
RXRA-201ENST00000356384 NUDT16Q96DE0 195 aaKnown RBP18.45■□□□□ 0.54
RXRA-201ENST00000356384 TMEM67Q5HYA8 995 aa18.45■□□□□ 0.54
RXRA-201ENST00000356384 IKBKGQ9Y6K9 419 aa18.45■□□□□ 0.54
RXRA-201ENST00000356384 ARHGEF11O15085 1522 aa18.45■□□□□ 0.54
RXRA-201ENST00000356384 SAMM50Q9Y512 469 aa18.45■□□□□ 0.54
RXRA-201ENST00000356384 KIAA1107Q9UPP5 1409 aa18.45■□□□□ 0.54
RXRA-201ENST00000356384 PABPN1LA6NDY0 278 aaKnown RBP18.45■□□□□ 0.54
RXRA-201ENST00000356384 GOLGA6L9A6NEM1 432 aa18.44■□□□□ 0.54
RXRA-201ENST00000356384 STX6O43752 255 aa18.44■□□□□ 0.54
RXRA-201ENST00000356384 ACTN2P35609 894 aa18.44■□□□□ 0.54
RXRA-201ENST00000356384 UBA7P41226 1012 aa18.44■□□□□ 0.54
RXRA-201ENST00000356384 FBF1Q8TES7 1133 aa18.44■□□□□ 0.54
RXRA-201ENST00000356384 TBC1D2Q9BYX2 928 aa18.44■□□□□ 0.54
RXRA-201ENST00000356384 ZNF165P49910 485 aa18.44■□□□□ 0.54
RXRA-201ENST00000356384 MPRIPQ6WCQ1 1025 aa18.44■□□□□ 0.54
RXRA-201ENST00000356384 KCNH5Q8NCM2 988 aa18.44■□□□□ 0.54
RXRA-201ENST00000356384 SLC52A1Q9NWF4 448 aa18.44■□□□□ 0.54
RXRA-201ENST00000356384 RARSP54136 660 aaKnown RBP18.44■□□□□ 0.54
RXRA-201ENST00000356384 SLC4A8Q2Y0W8 1093 aa18.44■□□□□ 0.54
RXRA-201ENST00000356384 DNAAF4Q8WXU2 420 aa18.44■□□□□ 0.54
RXRA-201ENST00000356384 CEP135Q66GS9 1140 aa18.44■□□□□ 0.54
RXRA-201ENST00000356384 STXBP4Q6ZWJ1 553 aa18.44■□□□□ 0.54
RXRA-201ENST00000356384 ALDH1L2Q3SY69 923 aa18.44■□□□□ 0.54
RXRA-201ENST00000356384 C20orf194Q5TEA3 1177 aa18.44■□□□□ 0.54
RXRA-201ENST00000356384 WAPLQ7Z5K2 1190 aa18.44■□□□□ 0.54
RXRA-201ENST00000356384 SPATA24Q86W54 205 aa18.44■□□□□ 0.54
RXRA-201ENST00000356384 GOLIM4O00461 696 aa18.43■□□□□ 0.54
RXRA-201ENST00000356384 KIAA0753Q2KHM9 967 aa18.43■□□□□ 0.54
RXRA-201ENST00000356384 MICU3Q86XE3 530 aa18.43■□□□□ 0.54
RXRA-201ENST00000356384 RPGRQ92834 1020 aaKnown RBP18.43■□□□□ 0.54
RXRA-201ENST00000356384 RNF216Q9NWF9 866 aaPredicted RBP18.43■□□□□ 0.54
RXRA-201ENST00000356384 RBM27Q9P2N5 1060 aaKnown RBP18.43■□□□□ 0.54
RXRA-201ENST00000356384 HAND2P61296 217 aa18.43■□□□□ 0.54
RXRA-201ENST00000356384 SLF2Q8IX21 1173 aa18.43■□□□□ 0.54
RXRA-201ENST00000356384 FEZ1Q99689 392 aa18.43■□□□□ 0.54
RXRA-201ENST00000356384 HSF2BPO75031 334 aa18.43■□□□□ 0.54
RXRA-201ENST00000356384 KIF21AQ7Z4S6 1674 aa18.43■□□□□ 0.54
RXRA-201ENST00000356384 A0A1W2PRG0 241 aa18.43■□□□□ 0.54
RXRA-201ENST00000356384 BBXQ8WY36 941 aaPredicted RBP18.43■□□□□ 0.54
RXRA-201ENST00000356384 ORC3Q9UBD5 711 aaPredicted RBP18.43■□□□□ 0.54
RXRA-201ENST00000356384 FERMT1Q9BQL6 677 aa18.42■□□□□ 0.54
RXRA-201ENST00000356384 EVI5LQ96CN4 794 aa18.42■□□□□ 0.54
RXRA-201ENST00000356384 KIF5BP33176 963 aa18.42■□□□□ 0.54
RXRA-201ENST00000356384 TRIM47Q96LD4 638 aa18.42■□□□□ 0.54
RXRA-201ENST00000356384 DDX23Q9BUQ8 820 aaKnown RBP18.42■□□□□ 0.54
RXRA-201ENST00000356384 N4BP3O15049 544 aa18.42■□□□□ 0.54
RXRA-201ENST00000356384 BMS1Q14692 1282 aaKnown RBP18.42■□□□□ 0.54
RXRA-201ENST00000356384 CCDC102BQ68D86 513 aa18.42■□□□□ 0.54
RXRA-201ENST00000356384 SLC26A6Q9BXS9 759 aa18.42■□□□□ 0.54
RXRA-201ENST00000356384 KAT14Q9H8E8 782 aa18.42■□□□□ 0.54
RXRA-201ENST00000356384 TTC21AQ8NDW8 1320 aa18.42■□□□□ 0.54
RXRA-201ENST00000356384 TSPY2A6NKD2 308 aa18.42■□□□□ 0.54
RXRA-201ENST00000356384 AKR1B10O60218 316 aa18.42■□□□□ 0.54
RXRA-201ENST00000356384 SNRKQ9NRH2 765 aa18.42■□□□□ 0.54
RXRA-201ENST00000356384 GPTP24298 496 aa18.41■□□□□ 0.54
RXRA-201ENST00000356384 METAP2P50579 478 aaKnown RBP eCLIP18.41■□□□□ 0.545e-6■■■□□ 18.4
RXRA-201ENST00000356384 BICD1Q96G01 975 aa18.41■□□□□ 0.54
RXRA-201ENST00000356384 ZHX1Q9UKY1 873 aaPredicted RBP18.41■□□□□ 0.54
RXRA-201ENST00000356384 CCDC174Q6PII3 467 aa18.4■□□□□ 0.54
RXRA-201ENST00000356384 KANK3Q6NY19 840 aa18.4■□□□□ 0.54
RXRA-201ENST00000356384 CCDC155Q8N6L0 562 aa18.4■□□□□ 0.54
RXRA-201ENST00000356384 PAIP2Q9BPZ3 127 aaKnown RBP18.4■□□□□ 0.54
RXRA-201ENST00000356384 CCDC61Q9Y6R9 512 aa18.4■□□□□ 0.54
RXRA-201ENST00000356384 C6orf229H3BNL8 230 aa18.4■□□□□ 0.54
RXRA-201ENST00000356384 EXOC1Q9NV70 894 aa18.4■□□□□ 0.54
RXRA-201ENST00000356384 PLEKHH2Q8IVE3 1493 aa18.4■□□□□ 0.54
RXRA-201ENST00000356384 CKAP4Q07065 602 aaKnown RBP18.39■□□□□ 0.53
RXRA-201ENST00000356384 IFI16Q16666 785 aaKnown RBP18.39■□□□□ 0.53
RXRA-201ENST00000356384 SSX2IPQ9Y2D8 614 aa18.39■□□□□ 0.53
RXRA-201ENST00000356384 TBCAO75347 108 aaKnown RBP18.39■□□□□ 0.53
RXRA-201ENST00000356384 MNAT1P51948 309 aa18.39■□□□□ 0.53
RXRA-201ENST00000356384 EHBP1Q8NDI1 1231 aa18.39■□□□□ 0.53
RXRA-201ENST00000356384 PYM1Q9BRP8 204 aaKnown RBP18.39■□□□□ 0.53
RXRA-201ENST00000356384 MXRA7P84157 204 aa18.39■□□□□ 0.53
RXRA-201ENST00000356384 ZBTB3Q9H5J0 574 aa18.39■□□□□ 0.53
RXRA-201ENST00000356384 MFSD6Q6ZSS7 791 aa18.39■□□□□ 0.53
RXRA-201ENST00000356384 ECHDC1Q9NTX5 307 aa18.39■□□□□ 0.53
RXRA-201ENST00000356384 PDE4BQ07343 736 aa18.38■□□□□ 0.53
RXRA-201ENST00000356384 NEK1Q96PY6 1258 aa18.38■□□□□ 0.53
RXRA-201ENST00000356384 ARL1P40616 181 aaPredicted RBP18.38■□□□□ 0.53
RXRA-201ENST00000356384 SYNCQ9H7C4 482 aa18.38■□□□□ 0.53
RXRA-201ENST00000356384 C11orf95C9JLR9 678 aaPredicted RBP18.38■□□□□ 0.53
RXRA-201ENST00000356384 RGS22Q8NE09 1264 aa18.38■□□□□ 0.53
RXRA-201ENST00000356384 NGLY1Q96IV0 654 aa18.38■□□□□ 0.53
RXRA-201ENST00000356384 RRAGBQ5VZM2 374 aa18.38■□□□□ 0.53
RXRA-201ENST00000356384 HYPKQ9NX55 129 aa18.38■□□□□ 0.53
RXRA-201ENST00000356384 PTPN23Q9H3S7 1636 aa18.37■□□□□ 0.53
RXRA-201ENST00000356384 TTF1Q15361 905 aaPredicted RBP18.37■□□□□ 0.53
RXRA-201ENST00000356384 AMOTQ4VCS5 1084 aa18.37■□□□□ 0.53
RXRA-201ENST00000356384 IQCGQ9H095 443 aaKnown RBP18.37■□□□□ 0.53
RXRA-201ENST00000356384 FOXO3O43524 673 aa18.37■□□□□ 0.53
RXRA-201ENST00000356384 HSPA4P34932 840 aa18.37■□□□□ 0.53
RXRA-201ENST00000356384 UBE2HP62256 183 aa18.37■□□□□ 0.53
RXRA-201ENST00000356384 CCDC6Q16204 474 aa18.37■□□□□ 0.53
RXRA-201ENST00000356384 HSP90AA4PQ58FG1 418 aa18.37■□□□□ 0.53
RXRA-201ENST00000356384 GIMAP6Q6P9H5 292 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms