RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 HSP90AA4PQ58FG1 418 aa16.06■□□□□ 0.16
TRIM4-203ENST00000355947 ECHDC1Q9NTX5 307 aa16.06■□□□□ 0.16
TRIM4-203ENST00000355947 VWDEQ8N2E2 1590 aa16.06■□□□□ 0.16
TRIM4-203ENST00000355947 KIF24Q5T7B8 1368 aa16.06■□□□□ 0.16
TRIM4-203ENST00000355947 MPRIPQ6WCQ1 1025 aa16.06■□□□□ 0.16
TRIM4-203ENST00000355947 SF3A1Q15459 793 aaKnown RBP16.05■□□□□ 0.16
TRIM4-203ENST00000355947 DNAAF4Q8WXU2 420 aa16.05■□□□□ 0.16
TRIM4-203ENST00000355947 STAP2Q9UGK3 403 aa16.05■□□□□ 0.16
TRIM4-203ENST00000355947 EDC4Q6P2E9 1401 aaKnown RBP16.05■□□□□ 0.16
TRIM4-203ENST00000355947 PPLO60437 1756 aa16.05■□□□□ 0.16
TRIM4-203ENST00000355947 IL17REQ8NFR9 667 aa16.05■□□□□ 0.16
TRIM4-203ENST00000355947 LEO1Q8WVC0 666 aaPredicted RBP16.05■□□□□ 0.16
TRIM4-203ENST00000355947 CCDC73Q6ZRK6 1079 aa16.04■□□□□ 0.16
TRIM4-203ENST00000355947 ZSCAN31Q96LW9 406 aaPredicted RBP16.04■□□□□ 0.16
TRIM4-203ENST00000355947 TLR7Q9NYK1 1049 aaKnown RBP16.04■□□□□ 0.16
TRIM4-203ENST00000355947 UTP14CQ5TAP6 766 aaKnown RBP16.04■□□□□ 0.16
TRIM4-203ENST00000355947 PLCD3Q8N3E9 789 aa16.04■□□□□ 0.16
TRIM4-203ENST00000355947 PPP6R1Q9UPN7 881 aa16.04■□□□□ 0.16
TRIM4-203ENST00000355947 SALL3Q9BXA9 1300 aa16.04■□□□□ 0.16
TRIM4-203ENST00000355947 METP08581 1390 aa16.04■□□□□ 0.16
TRIM4-203ENST00000355947 SMTNL1A8MU46 457 aa16.04■□□□□ 0.16
TRIM4-203ENST00000355947 PDCP20941 246 aa16.04■□□□□ 0.16
TRIM4-203ENST00000355947 GNL2Q13823 731 aaKnown RBP16.04■□□□□ 0.16
TRIM4-203ENST00000355947 C11orf57Q6ZUT1 292 aaPredicted RBP16.04■□□□□ 0.16
TRIM4-203ENST00000355947 LGR6Q9HBX8 967 aa16.04■□□□□ 0.16
TRIM4-203ENST00000355947 SH2B1Q9NRF2 756 aaPredicted RBP16.04■□□□□ 0.16
TRIM4-203ENST00000355947 A0A0D9SFI3 127 aa16.03■□□□□ 0.16
TRIM4-203ENST00000355947 CCDC69A6NI79 296 aa16.03■□□□□ 0.16
TRIM4-203ENST00000355947 AOPEPQ8N6M6 819 aa16.03■□□□□ 0.16
TRIM4-203ENST00000355947 SSH3Q8TE77 659 aa16.03■□□□□ 0.16
TRIM4-203ENST00000355947 FUCA2Q9BTY2 467 aa16.03■□□□□ 0.16
TRIM4-203ENST00000355947 FRMPD1Q5SYB0 1578 aa16.03■□□□□ 0.16
TRIM4-203ENST00000355947 KINO60870 393 aaKnown RBP16.03■□□□□ 0.16
TRIM4-203ENST00000355947 MYL6BP14649 208 aa16.03■□□□□ 0.16
TRIM4-203ENST00000355947 VPS53Q5VIR6 699 aa16.03■□□□□ 0.16
TRIM4-203ENST00000355947 SCAND2PQ9GZW5 306 aaPredicted RBP16.03■□□□□ 0.16
TRIM4-203ENST00000355947 OGFRQ9NZT2 677 aa16.03■□□□□ 0.16
TRIM4-203ENST00000355947 CCDC171Q6TFL3 1326 aa16.03■□□□□ 0.16
TRIM4-203ENST00000355947 KIAA0232Q92628 1395 aa16.03■□□□□ 0.16
TRIM4-203ENST00000355947 ST3GAL1Q11201 340 aa16.03■□□□□ 0.16
TRIM4-203ENST00000355947 RNF20Q5VTR2 975 aa16.03■□□□□ 0.16
TRIM4-203ENST00000355947 MAP3K2Q9Y2U5 619 aa16.03■□□□□ 0.16
TRIM4-203ENST00000355947 CPS1P31327 1500 aa16.02■□□□□ 0.16
TRIM4-203ENST00000355947 NEXMIFQ5QGS0 1516 aa16.02■□□□□ 0.16
TRIM4-203ENST00000355947 GTF2F1P35269 517 aaKnown RBP eCLIP16.02■□□□□ 0.16
TRIM4-203ENST00000355947 CCAR1Q8IX12 1150 aaKnown RBP16.02■□□□□ 0.16
TRIM4-203ENST00000355947 TMEM87AQ8NBN3 555 aa16.02■□□□□ 0.16
TRIM4-203ENST00000355947 KIF20AO95235 890 aa16.02■□□□□ 0.15
TRIM4-203ENST00000355947 PSMA5P28066 241 aa16.02■□□□□ 0.15
TRIM4-203ENST00000355947 ABTB2Q8N961 1025 aa16.02■□□□□ 0.15
TRIM4-203ENST00000355947 SLC27A2O14975 620 aa16.01■□□□□ 0.15
TRIM4-203ENST00000355947 SLFNL1Q499Z3 407 aa16.01■□□□□ 0.15
TRIM4-203ENST00000355947 OTUD7BQ6GQQ9 843 aa16.01■□□□□ 0.15
TRIM4-203ENST00000355947 SEC62Q99442 399 aaKnown RBP16.01■□□□□ 0.15
TRIM4-203ENST00000355947 NCOA5Q9HCD5 579 aaKnown RBP16.01■□□□□ 0.15
TRIM4-203ENST00000355947 USP32Q8NFA0 1604 aa16.01■□□□□ 0.15
TRIM4-203ENST00000355947 SYT10Q6XYQ8 523 aa16■□□□□ 0.15
TRIM4-203ENST00000355947 PGBD1Q96JS3 809 aa16■□□□□ 0.15
TRIM4-203ENST00000355947 DDX19AQ9NUU7 478 aaKnown RBP16■□□□□ 0.15
TRIM4-203ENST00000355947 MLH3Q9UHC1 1453 aa16■□□□□ 0.15
TRIM4-203ENST00000355947 PRAMEF22A3QJZ6 481 aa16■□□□□ 0.15
TRIM4-203ENST00000355947 ERCC6LQ2NKX8 1250 aa16■□□□□ 0.15
TRIM4-203ENST00000355947 HSP90AB4PQ58FF6 505 aa16■□□□□ 0.15
TRIM4-203ENST00000355947 TMC6Q7Z403 805 aa16■□□□□ 0.15
TRIM4-203ENST00000355947 ZNF589Q86UQ0 364 aaPredicted RBP16■□□□□ 0.15
TRIM4-203ENST00000355947 CTNNA3Q9UI47 895 aa16■□□□□ 0.15
TRIM4-203ENST00000355947 FSIP1Q8NA03 581 aa16■□□□□ 0.15
TRIM4-203ENST00000355947 NEUROD6Q96NK8 337 aa16■□□□□ 0.15
TRIM4-203ENST00000355947 NPHP3Q7Z494 1330 aa16■□□□□ 0.15
TRIM4-203ENST00000355947 POLR3DP05423 398 aaPredicted RBP15.99■□□□□ 0.15
TRIM4-203ENST00000355947 Q6ZUG5 572 aa15.99■□□□□ 0.15
TRIM4-203ENST00000355947 DDX46Q7L014 1031 aaKnown RBP15.99■□□□□ 0.15
TRIM4-203ENST00000355947 KRT222Q8N1A0 295 aa15.99■□□□□ 0.15
TRIM4-203ENST00000355947 IFT172Q9UG01 1749 aa15.99■□□□□ 0.15
TRIM4-203ENST00000355947 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.99■□□□□ 0.15
TRIM4-203ENST00000355947 CDK12Q9NYV4 1490 aaPredicted RBP15.99■□□□□ 0.15
TRIM4-203ENST00000355947 ANKRD7Q92527 254 aa15.99■□□□□ 0.15
TRIM4-203ENST00000355947 CLSTN2Q9H4D0 955 aa15.99■□□□□ 0.15
TRIM4-203ENST00000355947 ZSWIM6Q9HCJ5 1215 aa15.99■□□□□ 0.15
TRIM4-203ENST00000355947 KMT5BQ4FZB7 885 aa15.98■□□□□ 0.15
TRIM4-203ENST00000355947 PROSER3Q2NL68 480 aa15.98■□□□□ 0.15
TRIM4-203ENST00000355947 FBXO38Q6PIJ6 1188 aa15.98■□□□□ 0.15
TRIM4-203ENST00000355947 KIF18AQ8NI77 898 aa15.98■□□□□ 0.15
TRIM4-203ENST00000355947 EAF2Q96CJ1 260 aaPredicted RBP15.98■□□□□ 0.15
TRIM4-203ENST00000355947 CHMP4AQ9BY43 222 aa15.98■□□□□ 0.15
TRIM4-203ENST00000355947 A0A1B0GVL5 298 aa15.98■□□□□ 0.15
TRIM4-203ENST00000355947 BTBD11A6QL63 1104 aa15.98■□□□□ 0.15
TRIM4-203ENST00000355947 HTATSF1O43719 755 aaKnown RBP15.98■□□□□ 0.15
TRIM4-203ENST00000355947 GOLGA8FQ08AF8 430 aa15.98■□□□□ 0.15
TRIM4-203ENST00000355947 GOLGA8DPQ0D2H9 430 aa15.98■□□□□ 0.15
TRIM4-203ENST00000355947 SKIDA1Q1XH10 827 aa15.97■□□□□ 0.15
TRIM4-203ENST00000355947 EVI5LQ96CN4 794 aa15.97■□□□□ 0.15
TRIM4-203ENST00000355947 FEZ1Q99689 392 aa15.97■□□□□ 0.15
TRIM4-203ENST00000355947 ZSWIM4Q9H7M6 989 aa15.97■□□□□ 0.15
TRIM4-203ENST00000355947 CPSF1Q10570 1443 aaKnown RBP15.97■□□□□ 0.15
TRIM4-203ENST00000355947 SETD1BQ9UPS6 1966 aaKnown RBP15.97■□□□□ 0.15
TRIM4-203ENST00000355947 RIC3Q7Z5B4 369 aa15.97■□□□□ 0.15
TRIM4-203ENST00000355947 SSH2Q76I76 1423 aa15.97■□□□□ 0.15
TRIM4-203ENST00000355947 HECW2Q9P2P5 1572 aa15.97■□□□□ 0.15
TRIM4-203ENST00000355947 ZNF530Q6P9A1 599 aaPredicted RBP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 140.5 ms