RNA–Protein interactions for RNA: ENST00000355485.6

VANGL1-202, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VANGL1, Length 8,691 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-202ENST00000355485 SMC1AQ14683 1233 aaKnown RBP9.02□□□□□ -0.97
VANGL1-202ENST00000355485 CACNA2D4Q7Z3S7 1137 aa9.02□□□□□ -0.97
VANGL1-202ENST00000355485 GAS2L3Q86XJ1 694 aa9.02□□□□□ -0.97
VANGL1-202ENST00000355485 RAB3IL1Q8TBN0 382 aa9.02□□□□□ -0.97
VANGL1-202ENST00000355485 VTI1AQ96AJ9 217 aa9.02□□□□□ -0.97
VANGL1-202ENST00000355485 BMP2KQ9NSY1 1161 aaPredicted RBP9.01□□□□□ -0.97
VANGL1-202ENST00000355485 TIAM1Q13009 1591 aa9.01□□□□□ -0.97
VANGL1-202ENST00000355485 F13A1P00488 732 aa9.01□□□□□ -0.97
VANGL1-202ENST00000355485 CTNNBL1Q8WYA6 563 aaPredicted RBP9.01□□□□□ -0.97
VANGL1-202ENST00000355485 ERO1AQ96HE7 468 aa9.01□□□□□ -0.97
VANGL1-202ENST00000355485 C8orf76Q96K31 380 aa9.01□□□□□ -0.97
VANGL1-202ENST00000355485 EHMT1Q9H9B1 1298 aa9.01□□□□□ -0.97
VANGL1-202ENST00000355485 ZBTB22O15209 634 aa9.01□□□□□ -0.97
VANGL1-202ENST00000355485 IMMTQ16891 758 aaKnown RBP9.01□□□□□ -0.97
VANGL1-202ENST00000355485 CCDC158Q5M9N0 1113 aa9.01□□□□□ -0.97
VANGL1-202ENST00000355485 RRS1Q15050 365 aaKnown RBP9.01□□□□□ -0.97
VANGL1-202ENST00000355485 HDGFL1Q5TGJ6 251 aa9.01□□□□□ -0.97
VANGL1-202ENST00000355485 PLEKHA4Q9H4M7 779 aa9.01□□□□□ -0.97
VANGL1-202ENST00000355485 GCOM1H8Y6P7 765 aaPredicted RBP9.01□□□□□ -0.97
VANGL1-202ENST00000355485 MYZAPP0CAP1 466 aa9.01□□□□□ -0.97
VANGL1-202ENST00000355485 TSNARE1Q96NA8 513 aa9.01□□□□□ -0.97
VANGL1-202ENST00000355485 ARAP1Q96P48 1450 aa9.01□□□□□ -0.97
VANGL1-202ENST00000355485 CEP112Q8N8E3 955 aa9.01□□□□□ -0.97
VANGL1-202ENST00000355485 CCDC85AQ96PX6 553 aaPredicted RBP9.01□□□□□ -0.97
VANGL1-202ENST00000355485 SOGA3Q5TF21 947 aa9.01□□□□□ -0.97
VANGL1-202ENST00000355485 NCOA2Q15596 1464 aa9□□□□□ -0.97
VANGL1-202ENST00000355485 USO1O60763 962 aaKnown RBP9□□□□□ -0.97
VANGL1-202ENST00000355485 WDR78Q5VTH9 848 aa9□□□□□ -0.97
VANGL1-202ENST00000355485 MCM10Q7L590 875 aa9□□□□□ -0.97
VANGL1-202ENST00000355485 AFAP1L1Q8TED9 768 aa9□□□□□ -0.97
VANGL1-202ENST00000355485 DHX29Q7Z478 1369 aaKnown RBP9□□□□□ -0.97
VANGL1-202ENST00000355485 HGSO14964 777 aaPredicted RBP9□□□□□ -0.97
VANGL1-202ENST00000355485 LMOD1P29536 600 aaPredicted RBP9□□□□□ -0.97
VANGL1-202ENST00000355485 BMP2KLQ5H9B9 411 aa9□□□□□ -0.97
VANGL1-202ENST00000355485 ZNF287Q9HBT7 754 aa9□□□□□ -0.97
VANGL1-202ENST00000355485 VGFO15240 615 aaPredicted RBP9□□□□□ -0.97
VANGL1-202ENST00000355485 IFT81Q8WYA0 676 aa9□□□□□ -0.97
VANGL1-202ENST00000355485 RSRC1Q96IZ7 334 aaKnown RBP9□□□□□ -0.97
VANGL1-202ENST00000355485 SH2B1Q9NRF2 756 aaPredicted RBP9□□□□□ -0.97
VANGL1-202ENST00000355485 PRC1O43663 620 aa9□□□□□ -0.97
VANGL1-202ENST00000355485 LPXNO60711 386 aa9□□□□□ -0.97
VANGL1-202ENST00000355485 MAP2K2P36507 400 aa9□□□□□ -0.97
VANGL1-202ENST00000355485 MYO1BO43795 1136 aa9□□□□□ -0.97
VANGL1-202ENST00000355485 CHAMP1Q96JM3 812 aa9□□□□□ -0.97
VANGL1-202ENST00000355485 NESP48681 1621 aa8.99□□□□□ -0.97
VANGL1-202ENST00000355485 CC2D2AQ9P2K1 1620 aa8.99□□□□□ -0.97
VANGL1-202ENST00000355485 TOP2BQ02880 1626 aa8.99□□□□□ -0.97
VANGL1-202ENST00000355485 SPECC1LQ69YQ0 1117 aa8.99□□□□□ -0.97
VANGL1-202ENST00000355485 SREK1Q8WXA9 508 aaKnown RBP8.99□□□□□ -0.97
VANGL1-202ENST00000355485 AFMP43652 599 aa8.99□□□□□ -0.97
VANGL1-202ENST00000355485 HDXQ7Z353 690 aa8.99□□□□□ -0.97
VANGL1-202ENST00000355485 RPAINQ86UA6 219 aa8.99□□□□□ -0.97
VANGL1-202ENST00000355485 FAM76AQ8TAV0 307 aa8.99□□□□□ -0.97
VANGL1-202ENST00000355485 MYCBPQ99417 103 aaPredicted RBP8.99□□□□□ -0.97
VANGL1-202ENST00000355485 FGD5Q6ZNL6 1462 aa8.99□□□□□ -0.97
VANGL1-202ENST00000355485 ZSCAN26Q16670 478 aa8.99□□□□□ -0.97
VANGL1-202ENST00000355485 CCDC89Q8N998 374 aa8.99□□□□□ -0.97
VANGL1-202ENST00000355485 UBAC1Q9BSL1 405 aa8.99□□□□□ -0.97
VANGL1-202ENST00000355485 LONRF3Q496Y0 759 aa8.99□□□□□ -0.97
VANGL1-202ENST00000355485 OPA1O60313 960 aa8.99□□□□□ -0.97
VANGL1-202ENST00000355485 BUB1BO60566 1050 aaPredicted RBP8.99□□□□□ -0.97
VANGL1-202ENST00000355485 FBF1Q8TES7 1133 aa8.99□□□□□ -0.97
VANGL1-202ENST00000355485 PSMD1Q99460 953 aa8.99□□□□□ -0.97
VANGL1-202ENST00000355485 INPP5BP32019 993 aa8.99□□□□□ -0.97
VANGL1-202ENST00000355485 GSTTP1A0A1W2PQM5 241 aa8.98□□□□□ -0.97
VANGL1-202ENST00000355485 SEC31AO94979 1220 aaKnown RBP8.98□□□□□ -0.97
VANGL1-202ENST00000355485 TAF12Q16514 161 aa8.98□□□□□ -0.97
VANGL1-202ENST00000355485 CNNM1Q9NRU3 951 aa8.98□□□□□ -0.97
VANGL1-202ENST00000355485 CFTRP13569 1480 aa8.98□□□□□ -0.97
VANGL1-202ENST00000355485 OSCARQ8IYS5 282 aa8.98□□□□□ -0.97
VANGL1-202ENST00000355485 RLBP1P12271 317 aa8.98□□□□□ -0.97
VANGL1-202ENST00000355485 MARCKSP29966 332 aaPredicted RBP8.98□□□□□ -0.97
VANGL1-202ENST00000355485 MTIF2P46199 727 aaKnown RBP8.98□□□□□ -0.97
VANGL1-202ENST00000355485 LRCH2Q5VUJ6 765 aa8.98□□□□□ -0.97
VANGL1-202ENST00000355485 CPA1P15085 419 aa8.98□□□□□ -0.97
VANGL1-202ENST00000355485 PPP1R9BQ96SB3 815 aa8.98□□□□□ -0.97
VANGL1-202ENST00000355485 GUCA1BQ9UMX6 200 aa8.98□□□□□ -0.97
VANGL1-202ENST00000355485 GOLGA6L9A6NEM1 432 aa8.98□□□□□ -0.97
VANGL1-202ENST00000355485 ANKRD50Q9ULJ7 1429 aa8.98□□□□□ -0.97
VANGL1-202ENST00000355485 KRT32Q14532 448 aa8.98□□□□□ -0.97
VANGL1-202ENST00000355485 TMCO4Q5TGY1 634 aa8.98□□□□□ -0.97
VANGL1-202ENST00000355485 PUS7Q96PZ0 661 aaKnown RBP8.98□□□□□ -0.97
VANGL1-202ENST00000355485 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.98□□□□□ -0.97
VANGL1-202ENST00000355485 STX17P56962 302 aa8.97□□□□□ -0.97
VANGL1-202ENST00000355485 CCDC57Q2TAC2 916 aa8.97□□□□□ -0.97
VANGL1-202ENST00000355485 CCDC129Q6ZRS4 1044 aa8.97□□□□□ -0.97
VANGL1-202ENST00000355485 ALS2CR12Q96Q35 445 aa8.97□□□□□ -0.97
VANGL1-202ENST00000355485 CTAGE9A4FU28 777 aa8.97□□□□□ -0.97
VANGL1-202ENST00000355485 ATP6V1E1P36543 226 aa8.97□□□□□ -0.97
VANGL1-202ENST00000355485 GPIHBP1Q8IV16 184 aa8.97□□□□□ -0.97
VANGL1-202ENST00000355485 PYCARDQ9ULZ3 195 aa8.97□□□□□ -0.97
VANGL1-202ENST00000355485 HPDP32754 393 aaPredicted RBP8.97□□□□□ -0.97
VANGL1-202ENST00000355485 KIF5BP33176 963 aa8.97□□□□□ -0.97
VANGL1-202ENST00000355485 TTC19Q6DKK2 380 aaPredicted RBP8.97□□□□□ -0.97
VANGL1-202ENST00000355485 CEP131Q9UPN4 1083 aa8.97□□□□□ -0.97
VANGL1-202ENST00000355485 PEX19P40855 299 aa8.97□□□□□ -0.97
VANGL1-202ENST00000355485 GDAP1L1Q96MZ0 367 aa8.97□□□□□ -0.97
VANGL1-202ENST00000355485 CBX8Q9HC52 389 aa8.97□□□□□ -0.97
VANGL1-202ENST00000355485 LMBRD1Q9NUN5 540 aa8.97□□□□□ -0.97
VANGL1-202ENST00000355485 ANKRD30BQ9BXX2 1392 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms