RNA–Protein interactions for RNA: ENST00000354473.4

VPS72-201, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 3

Gene VPS72, Length 1,347 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-201ENST00000354473 KLRG2A4D1S0 409 aaPredicted RBP24.2■■□□□ 1.46
VPS72-201ENST00000354473 SLX4Q8IY92 1834 aa24.19■■□□□ 1.46
VPS72-201ENST00000354473 RIC3Q7Z5B4 369 aa24.19■■□□□ 1.46
VPS72-201ENST00000354473 CNKSR1Q969H4 720 aa24.19■■□□□ 1.46
VPS72-201ENST00000354473 NPR1P16066 1061 aa24.18■■□□□ 1.46
VPS72-201ENST00000354473 RNF123Q5XPI4 1314 aa24.18■■□□□ 1.46
VPS72-201ENST00000354473 ATP5J2-PTCD1G3V325 749 aa24.17■■□□□ 1.46
VPS72-201ENST00000354473 VAMP4O75379 141 aa24.17■■□□□ 1.46
VPS72-201ENST00000354473 DDX58O95786 925 aaKnown RBP24.17■■□□□ 1.46
VPS72-201ENST00000354473 ZNF428Q96B54 188 aa24.17■■□□□ 1.46
VPS72-201ENST00000354473 CACNA1FO60840 1977 aa24.17■■□□□ 1.46
VPS72-201ENST00000354473 SLC4A2P04920 1241 aa24.16■■□□□ 1.46
VPS72-201ENST00000354473 CRY2Q49AN0 593 aa24.16■■□□□ 1.46
VPS72-201ENST00000354473 PRPF40BQ6NWY9 871 aaKnown RBP24.16■■□□□ 1.46
VPS72-201ENST00000354473 ZNF784Q8NCA9 323 aaPredicted RBP24.16■■□□□ 1.46
VPS72-201ENST00000354473 ISCA1Q9BUE6 129 aa24.16■■□□□ 1.46
VPS72-201ENST00000354473 ZNF219Q9P2Y4 722 aaPredicted RBP24.16■■□□□ 1.46
VPS72-201ENST00000354473 TRMT112Q9UI30 125 aaKnown RBP24.16■■□□□ 1.46
VPS72-201ENST00000354473 ADCY9O60503 1353 aa24.15■■□□□ 1.46
VPS72-201ENST00000354473 C21orf2O43822 256 aa24.14■■□□□ 1.46
VPS72-201ENST00000354473 E9PSI1 815 aa24.13■■□□□ 1.45
VPS72-201ENST00000354473 C3orf67Q6ZVT6 689 aa24.13■■□□□ 1.45
VPS72-201ENST00000354473 G2E3Q7L622 706 aa24.13■■□□□ 1.45
VPS72-201ENST00000354473 SYNE4Q8N205 404 aa24.13■■□□□ 1.45
VPS72-201ENST00000354473 MYD88Q99836 296 aa24.13■■□□□ 1.45
VPS72-201ENST00000354473 SH3TC1Q8TE82 1336 aa24.13■■□□□ 1.45
VPS72-201ENST00000354473 LAMB2P55268 1798 aa24.13■■□□□ 1.45
VPS72-201ENST00000354473 SBF1O95248 1867 aa24.13■■□□□ 1.45
VPS72-201ENST00000354473 RASSF7Q02833 373 aa24.12■■□□□ 1.45
VPS72-201ENST00000354473 SLC10A5Q5PT55 438 aa24.12■■□□□ 1.45
VPS72-201ENST00000354473 RPGRQ92834 1020 aaKnown RBP24.12■■□□□ 1.45
VPS72-201ENST00000354473 MAP3K2Q9Y2U5 619 aa24.12■■□□□ 1.45
VPS72-201ENST00000354473 TRIM28Q13263 835 aaKnown RBP24.11■■□□□ 1.45
VPS72-201ENST00000354473 KSR2Q6VAB6 950 aa24.11■■□□□ 1.45
VPS72-201ENST00000354473 NLRP3Q96P20 1036 aa24.11■■□□□ 1.45
VPS72-201ENST00000354473 METTL22Q9BUU2 404 aaPredicted RBP24.11■■□□□ 1.45
VPS72-201ENST00000354473 FER1L6Q2WGJ9 1857 aa24.11■■□□□ 1.45
VPS72-201ENST00000354473 PI4KAP2A4QPH2 592 aa24.1■■□□□ 1.45
VPS72-201ENST00000354473 HCLS1P14317 486 aaPredicted RBP24.1■■□□□ 1.45
VPS72-201ENST00000354473 FLIIQ13045 1269 aa24.1■■□□□ 1.45
VPS72-201ENST00000354473 C9orf131Q5VYM1 1079 aa24.1■■□□□ 1.45
VPS72-201ENST00000354473 PI4KAP1Q8N8J0 262 aa24.1■■□□□ 1.45
VPS72-201ENST00000354473 DDX60Q8IY21 1712 aaKnown RBP24.1■■□□□ 1.45
VPS72-201ENST00000354473 ALDH1B1P30837 517 aa24.1■■□□□ 1.45
VPS72-201ENST00000354473 SLFN5Q08AF3 891 aa24.1■■□□□ 1.45
VPS72-201ENST00000354473 FAM89AQ96GI7 184 aa24.1■■□□□ 1.45
VPS72-201ENST00000354473 CDCA7LQ96GN5 454 aa24.1■■□□□ 1.45
VPS72-201ENST00000354473 NFKBIEO00221 500 aa24.09■■□□□ 1.45
VPS72-201ENST00000354473 HOXA10P31260 410 aaPredicted RBP24.09■■□□□ 1.45
VPS72-201ENST00000354473 SOGA3Q5TF21 947 aa24.09■■□□□ 1.45
VPS72-201ENST00000354473 RNF181Q9P0P0 153 aa24.09■■□□□ 1.45
VPS72-201ENST00000354473 FKBP5Q13451 457 aaPredicted RBP24.08■■□□□ 1.44
VPS72-201ENST00000354473 RTL5Q5HYW3 569 aaPredicted RBP24.08■■□□□ 1.44
VPS72-201ENST00000354473 RBM17Q96I25 401 aaKnown RBP24.08■■□□□ 1.44
VPS72-201ENST00000354473 CCDC88AQ3V6T2 1871 aa24.07■■□□□ 1.44
VPS72-201ENST00000354473 CCDC191Q8NCU4 936 aa24.07■■□□□ 1.44
VPS72-201ENST00000354473 C7orf43Q8WVR3 580 aa24.07■■□□□ 1.44
VPS72-201ENST00000354473 NEXNQ0ZGT2 675 aa24.06■■□□□ 1.44
VPS72-201ENST00000354473 CRAMP1Q96RY5 1269 aa24.06■■□□□ 1.44
VPS72-201ENST00000354473 CWC25Q9NXE8 425 aaPredicted RBP24.06■■□□□ 1.44
VPS72-201ENST00000354473 LMNB1P20700 586 aa24.05■■□□□ 1.44
VPS72-201ENST00000354473 CCDC93Q567U6 631 aa24.05■■□□□ 1.44
VPS72-201ENST00000354473 OLFM4Q6UX06 510 aa24.05■■□□□ 1.44
VPS72-201ENST00000354473 ZBTB38Q8NAP3 1195 aaPredicted RBP24.05■■□□□ 1.44
VPS72-201ENST00000354473 IGKV5-2P06315 115 aa24.04■■□□□ 1.44
VPS72-201ENST00000354473 PRELPP51888 382 aa24.04■■□□□ 1.44
VPS72-201ENST00000354473 ZNF526Q8TF50 670 aaPredicted RBP24.04■■□□□ 1.44
VPS72-201ENST00000354473 TAOK3Q9H2K8 898 aa24.04■■□□□ 1.44
VPS72-201ENST00000354473 TIAM2Q8IVF5 1701 aa24.03■■□□□ 1.44
VPS72-201ENST00000354473 LTBP3Q9NS15 1303 aa24.03■■□□□ 1.44
VPS72-201ENST00000354473 IRS4O14654 1257 aaPredicted RBP24.03■■□□□ 1.44
VPS72-201ENST00000354473 ABCC4O15439 1325 aa24.02■■□□□ 1.44
VPS72-201ENST00000354473 PPEF1O14829 653 aaPredicted RBP24.02■■□□□ 1.44
VPS72-201ENST00000354473 PCCAP05165 728 aaPredicted RBP24.02■■□□□ 1.44
VPS72-201ENST00000354473 CWF19L2Q2TBE0 894 aaKnown RBP24.02■■□□□ 1.44
VPS72-201ENST00000354473 TRMT2AQ8IZ69 625 aaKnown RBP24.02■■□□□ 1.44
VPS72-201ENST00000354473 DNAAF4Q8WXU2 420 aa24.02■■□□□ 1.44
VPS72-201ENST00000354473 TAF1P21675 1872 aa24.01■■□□□ 1.43
VPS72-201ENST00000354473 NEURL1BA8MQ27 555 aa24■■□□□ 1.43
VPS72-201ENST00000354473 DDX46Q7L014 1031 aaKnown RBP24■■□□□ 1.43
VPS72-201ENST00000354473 RTKN2Q8IZC4 609 aa24■■□□□ 1.43
VPS72-201ENST00000354473 JARID2Q92833 1246 aaPredicted RBP24■■□□□ 1.43
VPS72-201ENST00000354473 GPBP1L1Q9HC44 474 aaPredicted RBP24■■□□□ 1.43
VPS72-201ENST00000354473 DICER1Q9UPY3 1922 aaKnown RBP24■■□□□ 1.43
VPS72-201ENST00000354473 HNRNPUQ00839 825 aaKnown RBP eCLIP23.99■■□□□ 1.43
VPS72-201ENST00000354473 SLC51AQ86UW1 340 aa23.99■■□□□ 1.43
VPS72-201ENST00000354473 F6X3S4 739 aa23.98■■□□□ 1.43
VPS72-201ENST00000354473 HSP90B1P14625 803 aaKnown RBP23.98■■□□□ 1.43
VPS72-201ENST00000354473 SF3B3Q15393 1217 aaKnown RBP23.98■■□□□ 1.43
VPS72-201ENST00000354473 SNED1Q8TER0 1413 aa23.98■■□□□ 1.43
VPS72-201ENST00000354473 FKBP4Q02790 459 aaKnown RBP eCLIP23.97■■□□□ 1.43
VPS72-201ENST00000354473 CC2D2BQ6DHV5 1058 aa23.97■■□□□ 1.43
VPS72-201ENST00000354473 CDHR2Q9BYE9 1310 aa23.96■■□□□ 1.43
VPS72-201ENST00000354473 ZC3H4Q9UPT8 1303 aaKnown RBP23.96■■□□□ 1.43
VPS72-201ENST00000354473 GRAPQ13588 217 aa23.96■■□□□ 1.43
VPS72-201ENST00000354473 LINS1Q8NG48 757 aa23.96■■□□□ 1.43
VPS72-201ENST00000354473 GRAPLQ8TC17 118 aaPredicted RBP23.96■■□□□ 1.43
VPS72-201ENST00000354473 SSH1Q8WYL5 1049 aa23.96■■□□□ 1.43
VPS72-201ENST00000354473 MYH3P11055 1940 aa23.95■■□□□ 1.42
VPS72-201ENST00000354473 PDE8AO60658 829 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms