RNA–Protein interactions for RNA: ENST00000354433.7

CDRT1-202, CMT1A duplicated region transcript 1, humanhuman

TSL 2 BASIC

Gene CDRT1, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-202ENST00000354433 NTSR2O95665 410 aa14.9□□□□□ -0.02
CDRT1-202ENST00000354433 DDX21Q9NR30 783 aaKnown RBP eCLIP14.9□□□□□ -0.02
CDRT1-202ENST00000354433 MBIPQ9NS73 344 aa14.9□□□□□ -0.02
CDRT1-202ENST00000354433 LTBP3Q9NS15 1303 aa14.89□□□□□ -0.03
CDRT1-202ENST00000354433 ARFGEF2Q9Y6D5 1785 aa14.89□□□□□ -0.03
CDRT1-202ENST00000354433 HOXB7P09629 217 aa14.89□□□□□ -0.03
CDRT1-202ENST00000354433 UTP14AQ9BVJ6 771 aaKnown RBP14.89□□□□□ -0.03
CDRT1-202ENST00000354433 GNAI1P63096 354 aa14.88□□□□□ -0.03
CDRT1-202ENST00000354433 CRY2Q49AN0 593 aa14.88□□□□□ -0.03
CDRT1-202ENST00000354433 DUSP27Q5VZP5 1158 aa14.88□□□□□ -0.03
CDRT1-202ENST00000354433 OLFM4Q6UX06 510 aa14.88□□□□□ -0.03
CDRT1-202ENST00000354433 RBM46Q8TBY0 533 aaKnown RBP14.88□□□□□ -0.03
CDRT1-202ENST00000354433 IFT57Q9NWB7 429 aa14.88□□□□□ -0.03
CDRT1-202ENST00000354433 FER1L6Q2WGJ9 1857 aa14.87□□□□□ -0.03
CDRT1-202ENST00000354433 FKBP4Q02790 459 aaKnown RBP eCLIP14.87□□□□□ -0.03
CDRT1-202ENST00000354433 DBF4Q9UBU7 674 aaPredicted RBP14.87□□□□□ -0.03
CDRT1-202ENST00000354433 RIC1Q4ADV7 1423 aa14.87□□□□□ -0.03
CDRT1-202ENST00000354433 ELL2O00472 640 aaPredicted RBP14.86□□□□□ -0.03
CDRT1-202ENST00000354433 TCERG1O14776 1098 aaKnown RBP14.86□□□□□ -0.03
CDRT1-202ENST00000354433 VEGFAP15692 232 aaPredicted RBP14.86□□□□□ -0.03
CDRT1-202ENST00000354433 RTKN2Q8IZC4 609 aa14.86□□□□□ -0.03
CDRT1-202ENST00000354433 C7orf43Q8WVR3 580 aa14.86□□□□□ -0.03
CDRT1-202ENST00000354433 RBM17Q96I25 401 aaKnown RBP14.86□□□□□ -0.03
CDRT1-202ENST00000354433 NLRP3Q96P20 1036 aa14.86□□□□□ -0.03
CDRT1-202ENST00000354433 ZNF277Q9NRM2 450 aaPredicted RBP14.86□□□□□ -0.03
CDRT1-202ENST00000354433 ZNF428Q96B54 188 aa14.85□□□□□ -0.03
CDRT1-202ENST00000354433 TRMT112Q9UI30 125 aaKnown RBP14.85□□□□□ -0.03
CDRT1-202ENST00000354433 RNF123Q5XPI4 1314 aa14.85□□□□□ -0.03
CDRT1-202ENST00000354433 PPEF1O14829 653 aaPredicted RBP14.85□□□□□ -0.03
CDRT1-202ENST00000354433 NLRP10Q86W26 655 aa14.85□□□□□ -0.03
CDRT1-202ENST00000354433 SMC1BQ8NDV3 1235 aa14.85□□□□□ -0.03
CDRT1-202ENST00000354433 TMX4Q9H1E5 349 aaPredicted RBP14.85□□□□□ -0.03
CDRT1-202ENST00000354433 HYPKQ9NX55 129 aa14.85□□□□□ -0.03
CDRT1-202ENST00000354433 CCDC88AQ3V6T2 1871 aa14.84□□□□□ -0.03
CDRT1-202ENST00000354433 CEP350Q5VT06 3117 aa14.84□□□□□ -0.03
CDRT1-202ENST00000354433 ZNF853P0CG23 659 aa14.84□□□□□ -0.03
CDRT1-202ENST00000354433 APLP1P51693 650 aa14.84□□□□□ -0.03
CDRT1-202ENST00000354433 FSTL1Q12841 308 aa14.84□□□□□ -0.03
CDRT1-202ENST00000354433 TCIRG1Q13488 830 aa14.84□□□□□ -0.03
CDRT1-202ENST00000354433 ANKRD13DQ6ZTN6 518 aa14.84□□□□□ -0.03
CDRT1-202ENST00000354433 C3orf67Q6ZVT6 689 aa14.84□□□□□ -0.03
CDRT1-202ENST00000354433 PLBD2Q8NHP8 589 aa14.84□□□□□ -0.03
CDRT1-202ENST00000354433 SH3TC1Q8TE82 1336 aa14.83□□□□□ -0.04
CDRT1-202ENST00000354433 DDNO94850 711 aaPredicted RBP14.83□□□□□ -0.04
CDRT1-202ENST00000354433 GOLGA2Q08379 1002 aa14.83□□□□□ -0.04
CDRT1-202ENST00000354433 HCLS1P14317 486 aaPredicted RBP14.82□□□□□ -0.04
CDRT1-202ENST00000354433 HOXA10P31260 410 aaPredicted RBP14.82□□□□□ -0.04
CDRT1-202ENST00000354433 IARSP41252 1262 aaKnown RBP14.82□□□□□ -0.04
CDRT1-202ENST00000354433 CC2D2BQ6DHV5 1058 aa14.82□□□□□ -0.04
CDRT1-202ENST00000354433 SYNE4Q8N205 404 aa14.82□□□□□ -0.04
CDRT1-202ENST00000354433 CRAMP1Q96RY5 1269 aa14.82□□□□□ -0.04
CDRT1-202ENST00000354433 ANKRD36CQ5JPF3 1778 aa14.82□□□□□ -0.04
CDRT1-202ENST00000354433 ATP5J2-PTCD1G3V325 749 aa14.81□□□□□ -0.04
CDRT1-202ENST00000354433 RIC3Q7Z5B4 369 aa14.81□□□□□ -0.04
CDRT1-202ENST00000354433 JDP2Q8WYK2 163 aa14.81□□□□□ -0.04
CDRT1-202ENST00000354433 ABCC4O15439 1325 aa14.81□□□□□ -0.04
CDRT1-202ENST00000354433 TSR2Q969E8 191 aaKnown RBP14.81□□□□□ -0.04
CDRT1-202ENST00000354433 PSMD1Q99460 953 aa14.81□□□□□ -0.04
CDRT1-202ENST00000354433 WDR90Q96KV7 1748 aa14.8□□□□□ -0.04
CDRT1-202ENST00000354433 DICER1Q9UPY3 1922 aaKnown RBP14.8□□□□□ -0.04
CDRT1-202ENST00000354433 NEFLP07196 543 aa14.8□□□□□ -0.04
CDRT1-202ENST00000354433 RTL5Q5HYW3 569 aaPredicted RBP14.8□□□□□ -0.04
CDRT1-202ENST00000354433 SLC10A5Q5PT55 438 aa14.8□□□□□ -0.04
CDRT1-202ENST00000354433 DDX46Q7L014 1031 aaKnown RBP14.8□□□□□ -0.04
CDRT1-202ENST00000354433 C8orf58Q8NAV2 365 aa14.8□□□□□ -0.04
CDRT1-202ENST00000354433 PHAXQ9H814 394 aaKnown RBP14.8□□□□□ -0.04
CDRT1-202ENST00000354433 SALL2Q9Y467 1007 aaPredicted RBP14.8□□□□□ -0.04
CDRT1-202ENST00000354433 ZNF541Q9H0D2 1346 aa14.79□□□□□ -0.04
CDRT1-202ENST00000354433 IQCA1LA6NCM1 817 aa14.79□□□□□ -0.04
CDRT1-202ENST00000354433 CCDC30Q5VVM6 783 aa14.79□□□□□ -0.04
CDRT1-202ENST00000354433 SLC51AQ86UW1 340 aa14.79□□□□□ -0.04
CDRT1-202ENST00000354433 WWC1Q8IX03 1113 aa14.79□□□□□ -0.04
CDRT1-202ENST00000354433 LARGE2Q8N3Y3 721 aa14.79□□□□□ -0.04
CDRT1-202ENST00000354433 CHMP4AQ9BY43 222 aa14.79□□□□□ -0.04
CDRT1-202ENST00000354433 SNED1Q8TER0 1413 aa14.78□□□□□ -0.04
CDRT1-202ENST00000354433 POTECB2RU33 542 aa14.78□□□□□ -0.04
CDRT1-202ENST00000354433 HTRA3P83110 453 aa14.78□□□□□ -0.04
CDRT1-202ENST00000354433 CCDC27Q2M243 656 aa14.78□□□□□ -0.04
CDRT1-202ENST00000354433 GRIPAP1Q4V328 841 aa14.78□□□□□ -0.04
CDRT1-202ENST00000354433 FAM89AQ96GI7 184 aa14.78□□□□□ -0.04
CDRT1-202ENST00000354433 ISCA1Q9BUE6 129 aa14.78□□□□□ -0.04
CDRT1-202ENST00000354433 DDX58O95786 925 aaKnown RBP14.77□□□□□ -0.04
CDRT1-202ENST00000354433 EIF6P56537 245 aaKnown RBP14.77□□□□□ -0.04
CDRT1-202ENST00000354433 MYD88Q99836 296 aa14.77□□□□□ -0.04
CDRT1-202ENST00000354433 STK31Q9BXU1 1019 aa14.77□□□□□ -0.04
CDRT1-202ENST00000354433 ATP6V0A2Q9Y487 856 aa14.77□□□□□ -0.04
CDRT1-202ENST00000354433 PPIP5K2O43314 1243 aa14.77□□□□□ -0.05
CDRT1-202ENST00000354433 GRAPQ13588 217 aa14.77□□□□□ -0.05
CDRT1-202ENST00000354433 NCBP3Q53F19 620 aaKnown RBP14.77□□□□□ -0.05
CDRT1-202ENST00000354433 EAPPQ56P03 285 aaPredicted RBP14.77□□□□□ -0.05
CDRT1-202ENST00000354433 TSPYL6Q8N831 410 aa14.77□□□□□ -0.05
CDRT1-202ENST00000354433 GRAPLQ8TC17 118 aaPredicted RBP14.77□□□□□ -0.05
CDRT1-202ENST00000354433 GJA3Q9Y6H8 435 aa14.77□□□□□ -0.05
CDRT1-202ENST00000354433 DPP8Q6V1X1 898 aaPredicted RBP14.76□□□□□ -0.05
CDRT1-202ENST00000354433 NIM1KQ8IY84 436 aa14.76□□□□□ -0.05
CDRT1-202ENST00000354433 SUPT16HQ9Y5B9 1047 aaKnown RBP14.76□□□□□ -0.05
CDRT1-202ENST00000354433 FZD9O00144 591 aa14.75□□□□□ -0.05
CDRT1-202ENST00000354433 IRS4O14654 1257 aaPredicted RBP14.75□□□□□ -0.05
CDRT1-202ENST00000354433 BBOX1O75936 387 aa14.75□□□□□ -0.05
CDRT1-202ENST00000354433 POTEIP0CG38 1075 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms