RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 ADCY9O60503 1353 aa12.47□□□□□ -0.41
SMPD4-201ENST00000351288 FMN2Q9NZ56 1722 aa12.47□□□□□ -0.41
SMPD4-201ENST00000351288 AK2P54819 239 aa12.47□□□□□ -0.41
SMPD4-201ENST00000351288 ERC1Q8IUD2 1116 aa12.47□□□□□ -0.41
SMPD4-201ENST00000351288 CCDC83Q8IWF9 413 aa12.47□□□□□ -0.41
SMPD4-201ENST00000351288 HELBQ8NG08 1087 aaPredicted RBP12.47□□□□□ -0.41
SMPD4-201ENST00000351288 GOLIM4O00461 696 aa12.46□□□□□ -0.41
SMPD4-201ENST00000351288 RAB11FIP3O75154 756 aa12.46□□□□□ -0.41
SMPD4-201ENST00000351288 CEBPZQ03701 1054 aaKnown RBP12.46□□□□□ -0.41
SMPD4-201ENST00000351288 FAM182BQ5T319 152 aa12.46□□□□□ -0.41
SMPD4-201ENST00000351288 DNAJC10Q8IXB1 793 aa12.46□□□□□ -0.41
SMPD4-201ENST00000351288 SNX14Q9Y5W7 946 aa12.46□□□□□ -0.41
SMPD4-201ENST00000351288 PXDNQ92626 1479 aa12.46□□□□□ -0.41
SMPD4-201ENST00000351288 CEP126Q9P2H0 1117 aa12.46□□□□□ -0.42
SMPD4-201ENST00000351288 TFCP2Q12800 502 aa12.46□□□□□ -0.42
SMPD4-201ENST00000351288 FAM173BQ6P4H8 233 aa12.46□□□□□ -0.42
SMPD4-201ENST00000351288 RAB11FIP4Q86YS3 637 aa12.46□□□□□ -0.42
SMPD4-201ENST00000351288 NGLY1Q96IV0 654 aa12.46□□□□□ -0.42
SMPD4-201ENST00000351288 CWC22Q9HCG8 908 aaKnown RBP12.46□□□□□ -0.42
SMPD4-201ENST00000351288 ASAP1Q9ULH1 1129 aa12.46□□□□□ -0.42
SMPD4-201ENST00000351288 TAF6LQ9Y6J9 622 aa12.46□□□□□ -0.42
SMPD4-201ENST00000351288 TRMT112Q9UI30 125 aaKnown RBP12.45□□□□□ -0.42
SMPD4-201ENST00000351288 IQSEC3Q9UPP2 1182 aaPredicted RBP12.45□□□□□ -0.42
SMPD4-201ENST00000351288 CNPY2Q9Y2B0 182 aa12.45□□□□□ -0.42
SMPD4-201ENST00000351288 RGPD2P0DJD1 1756 aa12.45□□□□□ -0.42
SMPD4-201ENST00000351288 SLFNL1Q499Z3 407 aa12.45□□□□□ -0.42
SMPD4-201ENST00000351288 MEX3CQ5U5Q3 659 aaKnown RBP12.45□□□□□ -0.42
SMPD4-201ENST00000351288 ADGRL3Q9HAR2 1447 aa12.45□□□□□ -0.42
SMPD4-201ENST00000351288 NALCNQ8IZF0 1738 aa12.45□□□□□ -0.42
SMPD4-201ENST00000351288 SGSM2O43147 1006 aa12.44□□□□□ -0.42
SMPD4-201ENST00000351288 NWD1Q149M9 1564 aa12.44□□□□□ -0.42
SMPD4-201ENST00000351288 FBXW7Q969H0 707 aa12.44□□□□□ -0.42
SMPD4-201ENST00000351288 DDX11Q96FC9 970 aa12.44□□□□□ -0.42
SMPD4-201ENST00000351288 ARID3AQ99856 593 aa12.44□□□□□ -0.42
SMPD4-201ENST00000351288 STAP2Q9UGK3 403 aa12.44□□□□□ -0.42
SMPD4-201ENST00000351288 STARD3NLO95772 234 aa12.44□□□□□ -0.42
SMPD4-201ENST00000351288 CCDC24Q8N4L8 307 aa12.44□□□□□ -0.42
SMPD4-201ENST00000351288 TCHHQ07283 1943 aa12.44□□□□□ -0.42
SMPD4-201ENST00000351288 EPHA10Q5JZY3 1008 aa12.44□□□□□ -0.42
SMPD4-201ENST00000351288 EAF2Q96CJ1 260 aaPredicted RBP12.44□□□□□ -0.42
SMPD4-201ENST00000351288 C8orf37Q96NL8 207 aa12.44□□□□□ -0.42
SMPD4-201ENST00000351288 HAND2P61296 217 aa12.43□□□□□ -0.42
SMPD4-201ENST00000351288 POLA2Q14181 598 aa12.43□□□□□ -0.42
SMPD4-201ENST00000351288 CCDC129Q6ZRS4 1044 aa12.43□□□□□ -0.42
SMPD4-201ENST00000351288 USP48Q86UV5 1035 aa12.43□□□□□ -0.42
SMPD4-201ENST00000351288 CWC25Q9NXE8 425 aaPredicted RBP12.43□□□□□ -0.42
SMPD4-201ENST00000351288 IDH1O75874 414 aaKnown RBP12.43□□□□□ -0.42
SMPD4-201ENST00000351288 HSPA4P34932 840 aa12.43□□□□□ -0.42
SMPD4-201ENST00000351288 GCKRQ14397 625 aa12.43□□□□□ -0.42
SMPD4-201ENST00000351288 RUFY3Q7L099 469 aa12.43□□□□□ -0.42
SMPD4-201ENST00000351288 METTL24Q5JXM2 366 aa12.43□□□□□ -0.42
SMPD4-201ENST00000351288 TTC39AQ5SRH9 613 aa12.43□□□□□ -0.42
SMPD4-201ENST00000351288 FAM184AQ8NB25 1140 aa12.43□□□□□ -0.42
SMPD4-201ENST00000351288 DBNDD2Q9BQY9 259 aa12.43□□□□□ -0.42
SMPD4-201ENST00000351288 H3BQV1 296 aa12.42□□□□□ -0.42
SMPD4-201ENST00000351288 IFFO2Q5TF58 517 aa12.42□□□□□ -0.42
SMPD4-201ENST00000351288 KAZALD1Q96I82 304 aa12.42□□□□□ -0.42
SMPD4-201ENST00000351288 LSG1Q9H089 658 aaKnown RBP12.42□□□□□ -0.42
SMPD4-201ENST00000351288 CYP46A1Q9Y6A2 500 aa12.42□□□□□ -0.42
SMPD4-201ENST00000351288 ALDH1L1O75891 902 aa12.42□□□□□ -0.42
SMPD4-201ENST00000351288 SASH1O94885 1247 aa12.42□□□□□ -0.42
SMPD4-201ENST00000351288 BRD1O95696 1058 aa12.42□□□□□ -0.42
SMPD4-201ENST00000351288 RNF20Q5VTR2 975 aa12.42□□□□□ -0.42
SMPD4-201ENST00000351288 PDRG1Q9NUG6 133 aa12.42□□□□□ -0.42
SMPD4-201ENST00000351288 CEMIPQ8WUJ3 1361 aa12.42□□□□□ -0.42
SMPD4-201ENST00000351288 CLCN1P35523 988 aa12.42□□□□□ -0.42
SMPD4-201ENST00000351288 CHST3Q7LGC8 479 aa12.42□□□□□ -0.42
SMPD4-201ENST00000351288 NEURL1BA8MQ27 555 aa12.41□□□□□ -0.42
SMPD4-201ENST00000351288 IFIT1P09914 478 aaKnown RBP12.41□□□□□ -0.42
SMPD4-201ENST00000351288 NMIQ13287 307 aaPredicted RBP12.41□□□□□ -0.42
SMPD4-201ENST00000351288 LDHAL6AQ6ZMR3 332 aa12.41□□□□□ -0.42
SMPD4-201ENST00000351288 ARHGAP23Q9P227 1491 aa12.41□□□□□ -0.42
SMPD4-201ENST00000351288 GOLGB1Q14789 3259 aaKnown RBP12.41□□□□□ -0.42
SMPD4-201ENST00000351288 IGKV5-2P06315 115 aa12.41□□□□□ -0.42
SMPD4-201ENST00000351288 ZNF830Q96NB3 372 aaPredicted RBP12.41□□□□□ -0.42
SMPD4-201ENST00000351288 RRP12Q5JTH9 1297 aaKnown RBP12.41□□□□□ -0.42
SMPD4-201ENST00000351288 BLOC1S2Q6QNY1 142 aa12.41□□□□□ -0.42
SMPD4-201ENST00000351288 VPS37DQ86XT2 251 aa12.41□□□□□ -0.42
SMPD4-201ENST00000351288 SYNE4Q8N205 404 aa12.41□□□□□ -0.42
SMPD4-201ENST00000351288 METTL22Q9BUU2 404 aaPredicted RBP12.41□□□□□ -0.42
SMPD4-201ENST00000351288 MTMR7Q9Y216 660 aa12.41□□□□□ -0.42
SMPD4-201ENST00000351288 RAD50Q92878 1312 aa12.41□□□□□ -0.42
SMPD4-201ENST00000351288 ANKARQ7Z5J8 1434 aa12.4□□□□□ -0.42
SMPD4-201ENST00000351288 FER1L4A9Z1Z3 1794 aa12.4□□□□□ -0.42
SMPD4-201ENST00000351288 IFIT5Q13325 482 aaKnown RBP12.4□□□□□ -0.42
SMPD4-201ENST00000351288 SEC62Q99442 399 aaKnown RBP12.4□□□□□ -0.42
SMPD4-201ENST00000351288 A0A0D9SFI3 127 aa12.4□□□□□ -0.42
SMPD4-201ENST00000351288 UBAP1LF5GYI3 381 aa12.4□□□□□ -0.42
SMPD4-201ENST00000351288 GNL2Q13823 731 aaKnown RBP12.4□□□□□ -0.42
SMPD4-201ENST00000351288 MPHOSPH8Q99549 860 aa12.4□□□□□ -0.42
SMPD4-201ENST00000351288 LTN1O94822 1766 aa12.4□□□□□ -0.42
SMPD4-201ENST00000351288 SLIT1O75093 1534 aa12.4□□□□□ -0.42
SMPD4-201ENST00000351288 SYT1P21579 422 aa12.4□□□□□ -0.43
SMPD4-201ENST00000351288 MSNP26038 577 aaKnown RBP12.4□□□□□ -0.43
SMPD4-201ENST00000351288 CCDC158Q5M9N0 1113 aa12.4□□□□□ -0.43
SMPD4-201ENST00000351288 GUCY1B3Q02153 619 aa12.39□□□□□ -0.43
SMPD4-201ENST00000351288 SMIM5Q71RC9 77 aa12.39□□□□□ -0.43
SMPD4-201ENST00000351288 ISY1Q9ULR0 285 aaKnown RBP12.39□□□□□ -0.43
SMPD4-201ENST00000351288 C1orf167Q5SNV9 1468 aa12.39□□□□□ -0.43
SMPD4-201ENST00000351288 HCLS1P14317 486 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 135.1 ms