RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 CCZ1BP86790 482 aa12.5□□□□□ -0.41
CAPN3-203ENST00000349748 CCZ1P86791 482 aaPredicted RBP12.5□□□□□ -0.41
CAPN3-203ENST00000349748 MAP3K11Q16584 847 aa12.5□□□□□ -0.41
CAPN3-203ENST00000349748 SKIDA1Q1XH10 827 aa12.5□□□□□ -0.41
CAPN3-203ENST00000349748 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.5□□□□□ -0.41
CAPN3-203ENST00000349748 MICALL1Q8N3F8 863 aa12.5□□□□□ -0.41
CAPN3-203ENST00000349748 PSD3Q9NYI0 1048 aa12.5□□□□□ -0.41
CAPN3-203ENST00000349748 MCCP23508 829 aa12.49□□□□□ -0.41
CAPN3-203ENST00000349748 CC2D1AQ6P1N0 951 aaPredicted RBP12.49□□□□□ -0.41
CAPN3-203ENST00000349748 MYOM2P54296 1465 aa12.49□□□□□ -0.41
CAPN3-203ENST00000349748 ADAMTSL3P82987 1691 aa12.49□□□□□ -0.41
CAPN3-203ENST00000349748 ATAD2Q6PL18 1390 aa12.49□□□□□ -0.41
CAPN3-203ENST00000349748 CT47B1P0C2W7 299 aaPredicted RBP12.49□□□□□ -0.41
CAPN3-203ENST00000349748 MCM2P49736 904 aa12.49□□□□□ -0.41
CAPN3-203ENST00000349748 VPS18Q9P253 973 aa12.49□□□□□ -0.41
CAPN3-203ENST00000349748 CCDC196A0A1B0GTZ2 297 aa12.48□□□□□ -0.41
CAPN3-203ENST00000349748 KIF2AO00139 706 aaPredicted RBP12.48□□□□□ -0.41
CAPN3-203ENST00000349748 KAT2BQ92831 832 aa12.48□□□□□ -0.41
CAPN3-203ENST00000349748 DNAJC25Q9H1X3 360 aa12.48□□□□□ -0.41
CAPN3-203ENST00000349748 ADGRB3O60242 1522 aa12.48□□□□□ -0.41
CAPN3-203ENST00000349748 LIG1P18858 919 aa12.48□□□□□ -0.41
CAPN3-203ENST00000349748 LTKP29376 864 aa12.48□□□□□ -0.41
CAPN3-203ENST00000349748 HSPA2P54652 639 aa12.48□□□□□ -0.41
CAPN3-203ENST00000349748 TTC19Q6DKK2 380 aaPredicted RBP12.48□□□□□ -0.41
CAPN3-203ENST00000349748 SRRTQ9BXP5 876 aaKnown RBP12.48□□□□□ -0.41
CAPN3-203ENST00000349748 ELP1O95163 1332 aa12.48□□□□□ -0.41
CAPN3-203ENST00000349748 IFT172Q9UG01 1749 aa12.48□□□□□ -0.41
CAPN3-203ENST00000349748 KIF1BO60333 1816 aa12.48□□□□□ -0.41
CAPN3-203ENST00000349748 NUP62CLQ9H1M0 184 aa12.48□□□□□ -0.41
CAPN3-203ENST00000349748 C14orf93Q9H972 538 aaKnown RBP12.48□□□□□ -0.41
CAPN3-203ENST00000349748 SLC24A3Q9HC58 644 aa12.48□□□□□ -0.41
CAPN3-203ENST00000349748 RIMS2Q9UQ26 1411 aa12.47□□□□□ -0.41
CAPN3-203ENST00000349748 U2AF1L5P0DN76 240 aaPredicted RBP12.47□□□□□ -0.41
CAPN3-203ENST00000349748 SYT1P21579 422 aa12.47□□□□□ -0.41
CAPN3-203ENST00000349748 MTHFSP49914 203 aa12.47□□□□□ -0.41
CAPN3-203ENST00000349748 U2AF1Q01081 240 aaKnown RBP eCLIP12.47□□□□□ -0.41
CAPN3-203ENST00000349748 MYO3AQ8NEV4 1616 aa12.47□□□□□ -0.41
CAPN3-203ENST00000349748 ZNF165P49910 485 aa12.47□□□□□ -0.41
CAPN3-203ENST00000349748 TADA2BQ86TJ2 420 aa12.47□□□□□ -0.41
CAPN3-203ENST00000349748 ZNF428Q96B54 188 aa12.47□□□□□ -0.41
CAPN3-203ENST00000349748 EID1Q9Y6B2 187 aa12.47□□□□□ -0.41
CAPN3-203ENST00000349748 A2ML1A8K2U0 1454 aa12.47□□□□□ -0.41
CAPN3-203ENST00000349748 STX6O43752 255 aa12.46□□□□□ -0.41
CAPN3-203ENST00000349748 F13A1P00488 732 aa12.46□□□□□ -0.41
CAPN3-203ENST00000349748 NBPF6Q5VWK0 638 aa12.46□□□□□ -0.41
CAPN3-203ENST00000349748 THEMISQ8N1K5 641 aaPredicted RBP12.46□□□□□ -0.41
CAPN3-203ENST00000349748 TDRD7Q8NHU6 1098 aaKnown RBP12.46□□□□□ -0.41
CAPN3-203ENST00000349748 NBPF4Q96M43 638 aa12.46□□□□□ -0.41
CAPN3-203ENST00000349748 CARD6Q9BX69 1037 aa12.46□□□□□ -0.41
CAPN3-203ENST00000349748 SPATA31D1Q6ZQQ2 1576 aa12.46□□□□□ -0.41
CAPN3-203ENST00000349748 C3P01024 1663 aa12.46□□□□□ -0.41
CAPN3-203ENST00000349748 CPP00450 1065 aa12.46□□□□□ -0.42
CAPN3-203ENST00000349748 E4F1Q66K89 784 aaPredicted RBP12.46□□□□□ -0.42
CAPN3-203ENST00000349748 ECM2O94769 699 aaPredicted RBP12.45□□□□□ -0.42
CAPN3-203ENST00000349748 HDGFP51858 240 aaKnown RBP12.45□□□□□ -0.42
CAPN3-203ENST00000349748 NAIF1Q69YI7 327 aaPredicted RBP12.45□□□□□ -0.42
CAPN3-203ENST00000349748 PPP1R13BQ96KQ4 1090 aa12.45□□□□□ -0.42
CAPN3-203ENST00000349748 FUT8Q9BYC5 575 aa12.45□□□□□ -0.42
CAPN3-203ENST00000349748 ZBTB12Q9Y330 459 aaPredicted RBP12.45□□□□□ -0.42
CAPN3-203ENST00000349748 PIK3C2BO00750 1634 aa12.45□□□□□ -0.42
CAPN3-203ENST00000349748 NRXN1Q9ULB1 1477 aa12.45□□□□□ -0.42
CAPN3-203ENST00000349748 SBNO2Q9Y2G9 1366 aa12.45□□□□□ -0.42
CAPN3-203ENST00000349748 ATP8B1O43520 1251 aa12.45□□□□□ -0.42
CAPN3-203ENST00000349748 TADA3O75528 432 aa12.45□□□□□ -0.42
CAPN3-203ENST00000349748 EVCP57679 992 aa12.45□□□□□ -0.42
CAPN3-203ENST00000349748 CCDC30Q5VVM6 783 aa12.45□□□□□ -0.42
CAPN3-203ENST00000349748 TNMDQ9H2S6 317 aa12.45□□□□□ -0.42
CAPN3-203ENST00000349748 RTL1A6NKG5 1358 aa12.45□□□□□ -0.42
CAPN3-203ENST00000349748 INHBEP58166 350 aa12.45□□□□□ -0.42
CAPN3-203ENST00000349748 FBXW10Q5XX13 1052 aa12.45□□□□□ -0.42
CAPN3-203ENST00000349748 EFCAB13Q8IY85 973 aa12.45□□□□□ -0.42
CAPN3-203ENST00000349748 DNAI1Q9UI46 699 aa12.45□□□□□ -0.42
CAPN3-203ENST00000349748 NEURL4Q96JN8 1562 aa12.44□□□□□ -0.42
CAPN3-203ENST00000349748 NEMFO60524 1076 aa12.44□□□□□ -0.42
CAPN3-203ENST00000349748 N4BP1O75113 896 aaKnown RBP12.44□□□□□ -0.42
CAPN3-203ENST00000349748 SMC2O95347 1197 aa12.44□□□□□ -0.42
CAPN3-203ENST00000349748 HNRNPH1P31943 449 aaKnown RBP12.44□□□□□ -0.42
CAPN3-203ENST00000349748 LIG3P49916 1009 aa12.44□□□□□ -0.42
CAPN3-203ENST00000349748 GNL2Q13823 731 aaKnown RBP12.44□□□□□ -0.42
CAPN3-203ENST00000349748 ZRSR1Q15695 479 aaKnown RBP12.44□□□□□ -0.42
CAPN3-203ENST00000349748 ISM2Q6H9L7 571 aa12.44□□□□□ -0.42
CAPN3-203ENST00000349748 KCNV1Q6PIU1 500 aa12.44□□□□□ -0.42
CAPN3-203ENST00000349748 LRRC31Q6UY01 552 aa12.44□□□□□ -0.42
CAPN3-203ENST00000349748 PLCD4Q9BRC7 762 aa12.44□□□□□ -0.42
CAPN3-203ENST00000349748 ARFGAP3Q9NP61 516 aa12.44□□□□□ -0.42
CAPN3-203ENST00000349748 DACT1Q9NYF0 836 aa12.44□□□□□ -0.42
CAPN3-203ENST00000349748 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.44□□□□□ -0.42
CAPN3-203ENST00000349748 TPM1P09493 284 aa12.44□□□□□ -0.42
CAPN3-203ENST00000349748 PDE11AQ9HCR9 933 aa12.44□□□□□ -0.42
CAPN3-203ENST00000349748 TMEM2Q9UHN6 1383 aa12.43□□□□□ -0.42
CAPN3-203ENST00000349748 NEBLO76041 1014 aa12.43□□□□□ -0.42
CAPN3-203ENST00000349748 HOMER1Q86YM7 354 aa12.43□□□□□ -0.42
CAPN3-203ENST00000349748 JPH2Q9BR39 696 aaPredicted RBP12.43□□□□□ -0.42
CAPN3-203ENST00000349748 QRICH2Q9H0J4 1663 aa12.43□□□□□ -0.42
CAPN3-203ENST00000349748 URI1O94763 535 aaPredicted RBP12.43□□□□□ -0.42
CAPN3-203ENST00000349748 CCDC158Q5M9N0 1113 aa12.43□□□□□ -0.42
CAPN3-203ENST00000349748 TSHZ3Q63HK5 1081 aa12.43□□□□□ -0.42
CAPN3-203ENST00000349748 CPLX2Q6PUV4 134 aaKnown RBP12.43□□□□□ -0.42
CAPN3-203ENST00000349748 TICAM2Q86XR7 235 aa12.43□□□□□ -0.42
CAPN3-203ENST00000349748 PRPF38AQ8NAV1 312 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms