RNA–Protein interactions for RNA: ENST00000349718.8

CMTM7-202, Transcript of CKLF like MARVEL transmembrane domain containing 7, humanhuman

TSL 1 (best) BASIC

Gene CMTM7, Length 1,214 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM7-202ENST00000349718 CCDC93Q567U6 631 aa25.67■■□□□ 1.7
CMTM7-202ENST00000349718 UTP14AQ9BVJ6 771 aaKnown RBP25.67■■□□□ 1.7
CMTM7-202ENST00000349718 C16orf71Q8IYS4 520 aaPredicted RBP25.66■■□□□ 1.7
CMTM7-202ENST00000349718 C7orf43Q8WVR3 580 aa25.66■■□□□ 1.7
CMTM7-202ENST00000349718 RPGRQ92834 1020 aaKnown RBP25.66■■□□□ 1.7
CMTM7-202ENST00000349718 TOMM70O94826 608 aa25.65■■□□□ 1.7
CMTM7-202ENST00000349718 HYPKQ9NX55 129 aa25.65■■□□□ 1.7
CMTM7-202ENST00000349718 TCIRG1Q13488 830 aa25.64■■□□□ 1.7
CMTM7-202ENST00000349718 RRAGCQ9HB90 399 aa25.64■■□□□ 1.7
CMTM7-202ENST00000349718 RNF123Q5XPI4 1314 aa25.63■■□□□ 1.69
CMTM7-202ENST00000349718 GLTPD2A6NH11 291 aa25.63■■□□□ 1.69
CMTM7-202ENST00000349718 CCDC27Q2M243 656 aa25.63■■□□□ 1.69
CMTM7-202ENST00000349718 PLBD2Q8NHP8 589 aa25.63■■□□□ 1.69
CMTM7-202ENST00000349718 NLRP3Q96P20 1036 aa25.63■■□□□ 1.69
CMTM7-202ENST00000349718 ELL2O00472 640 aaPredicted RBP25.62■■□□□ 1.69
CMTM7-202ENST00000349718 ANKRD13DQ6ZTN6 518 aa25.62■■□□□ 1.69
CMTM7-202ENST00000349718 NLRP10Q86W26 655 aa25.62■■□□□ 1.69
CMTM7-202ENST00000349718 RTKN2Q8IZC4 609 aa25.62■■□□□ 1.69
CMTM7-202ENST00000349718 LAMB2P55268 1798 aa25.61■■□□□ 1.69
CMTM7-202ENST00000349718 HOXA10P31260 410 aaPredicted RBP25.61■■□□□ 1.69
CMTM7-202ENST00000349718 DPY19L2Q6NUT2 758 aa25.61■■□□□ 1.69
CMTM7-202ENST00000349718 RBM17Q96I25 401 aaKnown RBP25.61■■□□□ 1.69
CMTM7-202ENST00000349718 CHMP4AQ9BY43 222 aa25.61■■□□□ 1.69
CMTM7-202ENST00000349718 HSPA6P17066 643 aa25.6■■□□□ 1.69
CMTM7-202ENST00000349718 FKBP4Q02790 459 aaKnown RBP eCLIP25.6■■□□□ 1.69
CMTM7-202ENST00000349718 SLC10A5Q5PT55 438 aa25.6■■□□□ 1.69
CMTM7-202ENST00000349718 NCBP3Q53F19 620 aaKnown RBP25.59■■□□□ 1.69
CMTM7-202ENST00000349718 WWC1Q8IX03 1113 aa25.59■■□□□ 1.69
CMTM7-202ENST00000349718 CRAMP1Q96RY5 1269 aa25.59■■□□□ 1.69
CMTM7-202ENST00000349718 TRMT112Q9UI30 125 aaKnown RBP25.59■■□□□ 1.69
CMTM7-202ENST00000349718 CC2D2BQ6DHV5 1058 aa25.58■■□□□ 1.69
CMTM7-202ENST00000349718 OLFM4Q6UX06 510 aa25.58■■□□□ 1.69
CMTM7-202ENST00000349718 C8orf58Q8NAV2 365 aa25.58■■□□□ 1.69
CMTM7-202ENST00000349718 RBM46Q8TBY0 533 aaKnown RBP25.58■■□□□ 1.69
CMTM7-202ENST00000349718 SH3TC1Q8TE82 1336 aa25.57■■□□□ 1.68
CMTM7-202ENST00000349718 WDR90Q96KV7 1748 aa25.57■■□□□ 1.68
CMTM7-202ENST00000349718 VEGFAP15692 232 aaPredicted RBP25.56■■□□□ 1.68
CMTM7-202ENST00000349718 GOLGA2Q08379 1002 aa25.56■■□□□ 1.68
CMTM7-202ENST00000349718 CCDC30Q5VVM6 783 aa25.56■■□□□ 1.68
CMTM7-202ENST00000349718 C3orf67Q6ZVT6 689 aa25.56■■□□□ 1.68
CMTM7-202ENST00000349718 RIC3Q7Z5B4 369 aa25.55■■□□□ 1.68
CMTM7-202ENST00000349718 TSR2Q969E8 191 aaKnown RBP25.55■■□□□ 1.68
CMTM7-202ENST00000349718 ZNF277Q9NRM2 450 aaPredicted RBP25.55■■□□□ 1.68
CMTM7-202ENST00000349718 PPEF1O14829 653 aaPredicted RBP25.54■■□□□ 1.68
CMTM7-202ENST00000349718 GRIPAP1Q4V328 841 aa25.54■■□□□ 1.68
CMTM7-202ENST00000349718 ISCA1Q9BUE6 129 aa25.54■■□□□ 1.68
CMTM7-202ENST00000349718 TMX4Q9H1E5 349 aaPredicted RBP25.54■■□□□ 1.68
CMTM7-202ENST00000349718 IL16Q14005 1332 aa25.54■■□□□ 1.68
CMTM7-202ENST00000349718 DDX60Q8IY21 1712 aaKnown RBP25.54■■□□□ 1.68
CMTM7-202ENST00000349718 HCLS1P14317 486 aaPredicted RBP25.53■■□□□ 1.68
CMTM7-202ENST00000349718 SYNE4Q8N205 404 aa25.53■■□□□ 1.68
CMTM7-202ENST00000349718 PHAXQ9H814 394 aaKnown RBP25.53■■□□□ 1.68
CMTM7-202ENST00000349718 ATP5J2-PTCD1G3V325 749 aa25.52■■□□□ 1.68
CMTM7-202ENST00000349718 FSTL1Q12841 308 aa25.52■■□□□ 1.68
CMTM7-202ENST00000349718 PSMD1Q99460 953 aa25.52■■□□□ 1.68
CMTM7-202ENST00000349718 TCERG1O14776 1098 aaKnown RBP25.51■■□□□ 1.67
CMTM7-202ENST00000349718 IARSP41252 1262 aaKnown RBP25.51■■□□□ 1.67
CMTM7-202ENST00000349718 TSPYL6Q8N831 410 aa25.51■■□□□ 1.67
CMTM7-202ENST00000349718 SNED1Q8TER0 1413 aa25.51■■□□□ 1.67
CMTM7-202ENST00000349718 ABCC4O15439 1325 aa25.5■■□□□ 1.67
CMTM7-202ENST00000349718 DDX58O95786 925 aaKnown RBP25.5■■□□□ 1.67
CMTM7-202ENST00000349718 FAM9BQ8IZU0 186 aa25.5■■□□□ 1.67
CMTM7-202ENST00000349718 ZNF428Q96B54 188 aa25.5■■□□□ 1.67
CMTM7-202ENST00000349718 SALL2Q9Y467 1007 aaPredicted RBP25.5■■□□□ 1.67
CMTM7-202ENST00000349718 CACNA1FO60840 1977 aa25.49■■□□□ 1.67
CMTM7-202ENST00000349718 TAF1P21675 1872 aa25.49■■□□□ 1.67
CMTM7-202ENST00000349718 TRIM28Q13263 835 aaKnown RBP25.49■■□□□ 1.67
CMTM7-202ENST00000349718 DDX46Q7L014 1031 aaKnown RBP25.49■■□□□ 1.67
CMTM7-202ENST00000349718 SMC1BQ8NDV3 1235 aa25.49■■□□□ 1.67
CMTM7-202ENST00000349718 STK31Q9BXU1 1019 aa25.49■■□□□ 1.67
CMTM7-202ENST00000349718 DDNO94850 711 aaPredicted RBP25.48■■□□□ 1.67
CMTM7-202ENST00000349718 APLP1P51693 650 aa25.48■■□□□ 1.67
CMTM7-202ENST00000349718 TWISTNBQ3B726 338 aaPredicted RBP25.48■■□□□ 1.67
CMTM7-202ENST00000349718 FAM89AQ96GI7 184 aa25.48■■□□□ 1.67
CMTM7-202ENST00000349718 SCN4AP35499 1836 aa25.48■■□□□ 1.67
CMTM7-202ENST00000349718 CEP350Q5VT06 3117 aa25.47■■□□□ 1.67
CMTM7-202ENST00000349718 BBOX1O75936 387 aa25.47■■□□□ 1.67
CMTM7-202ENST00000349718 WDR63Q8IWG1 891 aa25.47■■□□□ 1.67
CMTM7-202ENST00000349718 JDP2Q8WYK2 163 aa25.47■■□□□ 1.67
CMTM7-202ENST00000349718 ATP6V0A2Q9Y487 856 aa25.47■■□□□ 1.67
CMTM7-202ENST00000349718 POTECB2RU33 542 aa25.46■■□□□ 1.67
CMTM7-202ENST00000349718 MYD88Q99836 296 aa25.46■■□□□ 1.67
CMTM7-202ENST00000349718 FANCIQ9NVI1 1328 aa25.44■■□□□ 1.66
CMTM7-202ENST00000349718 GRAPQ13588 217 aa25.44■■□□□ 1.66
CMTM7-202ENST00000349718 RTL5Q5HYW3 569 aaPredicted RBP25.44■■□□□ 1.66
CMTM7-202ENST00000349718 GRAPLQ8TC17 118 aaPredicted RBP25.44■■□□□ 1.66
CMTM7-202ENST00000349718 ZNF541Q9H0D2 1346 aa25.43■■□□□ 1.66
CMTM7-202ENST00000349718 IQCA1LA6NCM1 817 aa25.43■■□□□ 1.66
CMTM7-202ENST00000349718 HSP90B1P14625 803 aaKnown RBP25.43■■□□□ 1.66
CMTM7-202ENST00000349718 SP8Q8IXZ3 490 aa25.43■■□□□ 1.66
CMTM7-202ENST00000349718 CCDC191Q8NCU4 936 aa25.43■■□□□ 1.66
CMTM7-202ENST00000349718 METTL22Q9BUU2 404 aaPredicted RBP25.43■■□□□ 1.66
CMTM7-202ENST00000349718 FZD9O00144 591 aa25.42■■□□□ 1.66
CMTM7-202ENST00000349718 IRS4O14654 1257 aaPredicted RBP25.42■■□□□ 1.66
CMTM7-202ENST00000349718 SF3B3Q15393 1217 aaKnown RBP25.42■■□□□ 1.66
CMTM7-202ENST00000349718 TMC4Q7Z404 712 aa25.42■■□□□ 1.66
CMTM7-202ENST00000349718 LARGE2Q8N3Y3 721 aa25.42■■□□□ 1.66
CMTM7-202ENST00000349718 ZBTB38Q8NAP3 1195 aaPredicted RBP25.42■■□□□ 1.66
CMTM7-202ENST00000349718 SUPT20HQ8NEM7 779 aa25.42■■□□□ 1.66
CMTM7-202ENST00000349718 L3MBTL3Q96JM7 780 aaPredicted RBP25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms