RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 PI4K2BQ8TCG2 481 aa22.12■■□□□ 1.13
SCARF1-202ENST00000348987 LARGE1O95461 756 aa22.12■■□□□ 1.13
SCARF1-202ENST00000348987 CPA1P15085 419 aa22.12■■□□□ 1.13
SCARF1-202ENST00000348987 TYRO3Q06418 890 aa22.12■■□□□ 1.13
SCARF1-202ENST00000348987 MPRIPQ6WCQ1 1025 aa22.12■■□□□ 1.13
SCARF1-202ENST00000348987 KRT222Q8N1A0 295 aa22.12■■□□□ 1.13
SCARF1-202ENST00000348987 GJB2P29033 226 aa22.11■■□□□ 1.13
SCARF1-202ENST00000348987 POLA2Q14181 598 aa22.11■■□□□ 1.13
SCARF1-202ENST00000348987 RASEFQ8IZ41 740 aa22.11■■□□□ 1.13
SCARF1-202ENST00000348987 IP6K1Q92551 441 aa22.11■■□□□ 1.13
SCARF1-202ENST00000348987 TRIM5Q9C035 493 aa22.11■■□□□ 1.13
SCARF1-202ENST00000348987 BABAM1Q9NWV8 329 aa22.11■■□□□ 1.13
SCARF1-202ENST00000348987 MTMR6Q9Y217 621 aa22.11■■□□□ 1.13
SCARF1-202ENST00000348987 KMT5BQ4FZB7 885 aa22.11■■□□□ 1.13
SCARF1-202ENST00000348987 CKAP2LQ8IYA6 745 aa22.11■■□□□ 1.13
SCARF1-202ENST00000348987 KLHL34Q8N239 644 aa22.11■■□□□ 1.13
SCARF1-202ENST00000348987 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.11■■□□□ 1.13
SCARF1-202ENST00000348987 V9GYY5 206 aaPredicted RBP22.11■■□□□ 1.13
SCARF1-202ENST00000348987 CCDC66A2RUB6 948 aa22.1■■□□□ 1.13
SCARF1-202ENST00000348987 MAP3K11Q16584 847 aa22.1■■□□□ 1.13
SCARF1-202ENST00000348987 BEND3Q5T5X7 828 aa22.1■■□□□ 1.13
SCARF1-202ENST00000348987 CCDC83Q8IWF9 413 aa22.1■■□□□ 1.13
SCARF1-202ENST00000348987 CBX8Q9HC52 389 aa22.1■■□□□ 1.13
SCARF1-202ENST00000348987 ERICH4A6NGS2 130 aa22.1■■□□□ 1.13
SCARF1-202ENST00000348987 VPS37CA5D8V6 355 aaPredicted RBP22.09■■□□□ 1.13
SCARF1-202ENST00000348987 LIG1P18858 919 aa22.09■■□□□ 1.13
SCARF1-202ENST00000348987 ANO6Q4KMQ2 910 aa22.09■■□□□ 1.13
SCARF1-202ENST00000348987 CACTINQ8WUQ7 758 aaKnown RBP22.09■■□□□ 1.13
SCARF1-202ENST00000348987 DNAAF4Q8WXU2 420 aa22.09■■□□□ 1.13
SCARF1-202ENST00000348987 NUP62CLQ9H1M0 184 aa22.09■■□□□ 1.13
SCARF1-202ENST00000348987 CEP135Q66GS9 1140 aa22.09■■□□□ 1.13
SCARF1-202ENST00000348987 PXDNLA1KZ92 1463 aa22.08■■□□□ 1.13
SCARF1-202ENST00000348987 ZNF75DP51815 510 aa22.08■■□□□ 1.13
SCARF1-202ENST00000348987 PRAMEF22A3QJZ6 481 aa22.07■■□□□ 1.12
SCARF1-202ENST00000348987 MAPK8IP2Q13387 824 aaPredicted RBP22.07■■□□□ 1.12
SCARF1-202ENST00000348987 TTC6Q86TZ1 520 aa22.07■■□□□ 1.12
SCARF1-202ENST00000348987 PLA2G4DQ86XP0 818 aa22.07■■□□□ 1.12
SCARF1-202ENST00000348987 ZNF397Q8NF99 534 aaPredicted RBP22.07■■□□□ 1.12
SCARF1-202ENST00000348987 ZNF215Q9UL58 517 aaPredicted RBP22.07■■□□□ 1.12
SCARF1-202ENST00000348987 RAD50Q92878 1312 aa22.07■■□□□ 1.12
SCARF1-202ENST00000348987 PROSER3Q2NL68 480 aa22.07■■□□□ 1.12
SCARF1-202ENST00000348987 ZNF530Q6P9A1 599 aaPredicted RBP22.07■■□□□ 1.12
SCARF1-202ENST00000348987 TIGD1Q96MW7 591 aa22.07■■□□□ 1.12
SCARF1-202ENST00000348987 CHD2O14647 1828 aaKnown RBP22.06■■□□□ 1.12
SCARF1-202ENST00000348987 BTBD11A6QL63 1104 aa22.06■■□□□ 1.12
SCARF1-202ENST00000348987 DDX17Q92841 729 aaKnown RBP22.06■■□□□ 1.12
SCARF1-202ENST00000348987 ST7Q9NRC1 585 aa22.06■■□□□ 1.12
SCARF1-202ENST00000348987 ADCY9O60503 1353 aa22.06■■□□□ 1.12
SCARF1-202ENST00000348987 RAB11FIP3O75154 756 aa22.06■■□□□ 1.12
SCARF1-202ENST00000348987 TEFQ10587 303 aa22.06■■□□□ 1.12
SCARF1-202ENST00000348987 CCDC144BQ3MJ40 725 aa22.06■■□□□ 1.12
SCARF1-202ENST00000348987 CCDC144CPQ8IYA2 1237 aa22.06■■□□□ 1.12
SCARF1-202ENST00000348987 KIF1BPQ96EK5 621 aa22.06■■□□□ 1.12
SCARF1-202ENST00000348987 SPG7Q9UQ90 795 aa22.06■■□□□ 1.12
SCARF1-202ENST00000348987 SGSM2O43147 1006 aa22.05■■□□□ 1.12
SCARF1-202ENST00000348987 CASTP20810 708 aaKnown RBP22.05■■□□□ 1.12
SCARF1-202ENST00000348987 FAM173BQ6P4H8 233 aa22.05■■□□□ 1.12
SCARF1-202ENST00000348987 CWC27Q6UX04 472 aaKnown RBP22.05■■□□□ 1.12
SCARF1-202ENST00000348987 CLIP2Q9UDT6 1046 aa22.05■■□□□ 1.12
SCARF1-202ENST00000348987 AOX1Q06278 1338 aa22.05■■□□□ 1.12
SCARF1-202ENST00000348987 CACNA1FO60840 1977 aa22.05■■□□□ 1.12
SCARF1-202ENST00000348987 TNMDQ9H2S6 317 aa22.05■■□□□ 1.12
SCARF1-202ENST00000348987 USP27XA6NNY8 438 aa22.04■■□□□ 1.12
SCARF1-202ENST00000348987 EPB41L2O43491 1005 aaKnown RBP22.04■■□□□ 1.12
SCARF1-202ENST00000348987 IPO4Q8TEX9 1081 aaKnown RBP22.04■■□□□ 1.12
SCARF1-202ENST00000348987 HYPKQ9NX55 129 aa22.04■■□□□ 1.12
SCARF1-202ENST00000348987 DACT1Q9NYF0 836 aa22.04■■□□□ 1.12
SCARF1-202ENST00000348987 RBM6P78332 1123 aaKnown RBP22.04■■□□□ 1.12
SCARF1-202ENST00000348987 FBXO38Q6PIJ6 1188 aa22.04■■□□□ 1.12
SCARF1-202ENST00000348987 FERMT3Q86UX7 667 aa22.04■■□□□ 1.12
SCARF1-202ENST00000348987 LSG1Q9H089 658 aaKnown RBP22.04■■□□□ 1.12
SCARF1-202ENST00000348987 PA2G4Q9UQ80 394 aaKnown RBP22.03■■□□□ 1.12
SCARF1-202ENST00000348987 CWF19L2Q2TBE0 894 aaKnown RBP22.02■■□□□ 1.12
SCARF1-202ENST00000348987 LTN1O94822 1766 aa22.02■■□□□ 1.12
SCARF1-202ENST00000348987 GCP02774 474 aa22.02■■□□□ 1.12
SCARF1-202ENST00000348987 ARID5BQ14865 1188 aa22.02■■□□□ 1.12
SCARF1-202ENST00000348987 ELF2Q15723 593 aa22.02■■□□□ 1.12
SCARF1-202ENST00000348987 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.02■■□□□ 1.12
SCARF1-202ENST00000348987 PLCD3Q8N3E9 789 aa22.02■■□□□ 1.12
SCARF1-202ENST00000348987 FAM53CQ9NYF3 392 aa22.02■■□□□ 1.12
SCARF1-202ENST00000348987 AXIN2Q9Y2T1 843 aa22.02■■□□□ 1.12
SCARF1-202ENST00000348987 NFAT5O94916 1531 aa22.01■■□□□ 1.11
SCARF1-202ENST00000348987 OS9Q13438 667 aaPredicted RBP22.01■■□□□ 1.11
SCARF1-202ENST00000348987 KRT85P78386 507 aa22.01■■□□□ 1.11
SCARF1-202ENST00000348987 MAP3K2Q9Y2U5 619 aa22.01■■□□□ 1.11
SCARF1-202ENST00000348987 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.01■■□□□ 1.11
SCARF1-202ENST00000348987 NPHP1O15259 732 aa22■■□□□ 1.11
SCARF1-202ENST00000348987 AKAP4Q5JQC9 854 aa22■■□□□ 1.11
SCARF1-202ENST00000348987 NECAB1Q8N987 351 aa22■■□□□ 1.11
SCARF1-202ENST00000348987 DNAJC25Q9H1X3 360 aa22■■□□□ 1.11
SCARF1-202ENST00000348987 PXDNQ92626 1479 aa22■■□□□ 1.11
SCARF1-202ENST00000348987 ZNF165P49910 485 aa22■■□□□ 1.11
SCARF1-202ENST00000348987 TDRD7Q8NHU6 1098 aaKnown RBP22■■□□□ 1.11
SCARF1-202ENST00000348987 MED1Q15648 1581 aaPredicted RBP22■■□□□ 1.11
SCARF1-202ENST00000348987 ZC3H6P61129 1189 aaKnown RBP21.99■■□□□ 1.11
SCARF1-202ENST00000348987 ST3GAL1Q11201 340 aa21.99■■□□□ 1.11
SCARF1-202ENST00000348987 PTPN14Q15678 1187 aa21.99■■□□□ 1.11
SCARF1-202ENST00000348987 PROSER2Q86WR7 435 aaPredicted RBP21.99■■□□□ 1.11
SCARF1-202ENST00000348987 LRRC8AQ8IWT6 810 aa21.99■■□□□ 1.11
SCARF1-202ENST00000348987 CNTROBQ8N137 903 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms