RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 CCDC129Q6ZRS4 1044 aa7.32□□□□□ -1.24
CLCN3-201ENST00000347613 CCDC83Q8IWF9 413 aa7.32□□□□□ -1.24
CLCN3-201ENST00000347613 UTYO14607 1347 aa7.31□□□□□ -1.24
CLCN3-201ENST00000347613 AOX1Q06278 1338 aa7.31□□□□□ -1.24
CLCN3-201ENST00000347613 PHKG2P15735 406 aa7.31□□□□□ -1.24
CLCN3-201ENST00000347613 PDLIM2Q96JY6 352 aa7.31□□□□□ -1.24
CLCN3-201ENST00000347613 MYD88Q99836 296 aa7.31□□□□□ -1.24
CLCN3-201ENST00000347613 KDM4FA0A1W2PPD8 638 aa7.31□□□□□ -1.24
CLCN3-201ENST00000347613 PPFIA3O75145 1194 aa7.31□□□□□ -1.24
CLCN3-201ENST00000347613 HOXB7P09629 217 aa7.31□□□□□ -1.24
CLCN3-201ENST00000347613 C1orf141Q5JVX7 400 aa7.31□□□□□ -1.24
CLCN3-201ENST00000347613 SLC52A2Q9HAB3 445 aa7.31□□□□□ -1.24
CLCN3-201ENST00000347613 NLRP2Q9NX02 1062 aa7.31□□□□□ -1.24
CLCN3-201ENST00000347613 AFDNP55196 1824 aaKnown RBP7.31□□□□□ -1.24
CLCN3-201ENST00000347613 NPHP3Q7Z494 1330 aa7.31□□□□□ -1.24
CLCN3-201ENST00000347613 NBPF26B4DH59 902 aa7.31□□□□□ -1.24
CLCN3-201ENST00000347613 OS9Q13438 667 aaPredicted RBP7.31□□□□□ -1.24
CLCN3-201ENST00000347613 NBPF14Q5TI25 921 aa7.31□□□□□ -1.24
CLCN3-201ENST00000347613 NBPF10Q6P3W6 841 aaKnown RBP7.31□□□□□ -1.24
CLCN3-201ENST00000347613 LRSAM1Q6UWE0 723 aa7.31□□□□□ -1.24
CLCN3-201ENST00000347613 PROSER2Q86WR7 435 aaPredicted RBP7.31□□□□□ -1.24
CLCN3-201ENST00000347613 NBPF15Q8N660 670 aa7.31□□□□□ -1.24
CLCN3-201ENST00000347613 DDX21Q9NR30 783 aaKnown RBP eCLIP7.31□□□□□ -1.24
CLCN3-201ENST00000347613 GCKRQ14397 625 aa7.3□□□□□ -1.24
CLCN3-201ENST00000347613 INTS4Q96HW7 963 aaKnown RBP7.3□□□□□ -1.24
CLCN3-201ENST00000347613 JAKMIP1Q96N16 626 aaKnown RBP7.3□□□□□ -1.24
CLCN3-201ENST00000347613 ZNF830Q96NB3 372 aaPredicted RBP7.3□□□□□ -1.24
CLCN3-201ENST00000347613 ECHDC1Q9NTX5 307 aa7.3□□□□□ -1.24
CLCN3-201ENST00000347613 DBNLQ9UJU6 430 aaKnown RBP7.3□□□□□ -1.24
CLCN3-201ENST00000347613 ARFGEF2Q9Y6D5 1785 aa7.3□□□□□ -1.24
CLCN3-201ENST00000347613 DNM1Q05193 864 aaKnown RBP7.3□□□□□ -1.24
CLCN3-201ENST00000347613 PTPN12Q05209 780 aaKnown RBP7.3□□□□□ -1.24
CLCN3-201ENST00000347613 CNTROBQ8N137 903 aa7.3□□□□□ -1.24
CLCN3-201ENST00000347613 NKX2-3Q8TAU0 364 aa7.3□□□□□ -1.24
CLCN3-201ENST00000347613 RBM8AQ9Y5S9 174 aaKnown RBP7.3□□□□□ -1.24
CLCN3-201ENST00000347613 BRD2P25440 801 aaKnown RBP7.29□□□□□ -1.24
CLCN3-201ENST00000347613 CASP7P55210 303 aa7.29□□□□□ -1.24
CLCN3-201ENST00000347613 TFCP2Q12800 502 aa7.29□□□□□ -1.24
CLCN3-201ENST00000347613 AMOTQ4VCS5 1084 aa7.29□□□□□ -1.24
CLCN3-201ENST00000347613 LINS1Q8NG48 757 aa7.29□□□□□ -1.24
CLCN3-201ENST00000347613 ZSWIM6Q9HCJ5 1215 aa7.29□□□□□ -1.24
CLCN3-201ENST00000347613 GJB2P29033 226 aa7.29□□□□□ -1.24
CLCN3-201ENST00000347613 HSPA2P54652 639 aa7.29□□□□□ -1.24
CLCN3-201ENST00000347613 TOB2Q14106 344 aaPredicted RBP7.29□□□□□ -1.24
CLCN3-201ENST00000347613 CREB3L3Q68CJ9 461 aa7.29□□□□□ -1.24
CLCN3-201ENST00000347613 TTLL7Q6ZT98 887 aa7.29□□□□□ -1.24
CLCN3-201ENST00000347613 MAP4K1Q92918 833 aa7.29□□□□□ -1.24
CLCN3-201ENST00000347613 KCNB2Q92953 911 aa7.29□□□□□ -1.24
CLCN3-201ENST00000347613 NAP1L5Q96NT1 182 aaPredicted RBP7.29□□□□□ -1.24
CLCN3-201ENST00000347613 MTMR6Q9Y217 621 aa7.29□□□□□ -1.24
CLCN3-201ENST00000347613 LAMA4Q16363 1823 aa7.29□□□□□ -1.24
CLCN3-201ENST00000347613 MST1RQ04912 1400 aa7.29□□□□□ -1.24
CLCN3-201ENST00000347613 GOLGA6L22H0YM25 854 aa7.29□□□□□ -1.24
CLCN3-201ENST00000347613 SLC27A2O14975 620 aa7.29□□□□□ -1.24
CLCN3-201ENST00000347613 RIC3Q7Z5B4 369 aa7.29□□□□□ -1.24
CLCN3-201ENST00000347613 CLASRPQ8N2M8 674 aaKnown RBP7.29□□□□□ -1.24
CLCN3-201ENST00000347613 C17orf53Q8N3J3 647 aaPredicted RBP7.29□□□□□ -1.24
CLCN3-201ENST00000347613 ALDH1L1O75891 902 aa7.28□□□□□ -1.24
CLCN3-201ENST00000347613 GLRX3O76003 335 aaKnown RBP7.28□□□□□ -1.24
CLCN3-201ENST00000347613 VPS53Q5VIR6 699 aa7.28□□□□□ -1.24
CLCN3-201ENST00000347613 UBE3BQ7Z3V4 1068 aa7.28□□□□□ -1.24
CLCN3-201ENST00000347613 FERMT3Q86UX7 667 aa7.28□□□□□ -1.24
CLCN3-201ENST00000347613 ZNF594Q96JF6 807 aaPredicted RBP7.28□□□□□ -1.24
CLCN3-201ENST00000347613 LRRC2Q9BYS8 371 aa7.28□□□□□ -1.24
CLCN3-201ENST00000347613 TTC41PQ6P2S7 1318 aa7.28□□□□□ -1.24
CLCN3-201ENST00000347613 CCDC171Q6TFL3 1326 aa7.28□□□□□ -1.24
CLCN3-201ENST00000347613 XIRP1Q702N8 1843 aaKnown RBP7.28□□□□□ -1.24
CLCN3-201ENST00000347613 IFIT2P09913 472 aaKnown RBP7.28□□□□□ -1.24
CLCN3-201ENST00000347613 ZSCAN22P10073 491 aaPredicted RBP7.28□□□□□ -1.24
CLCN3-201ENST00000347613 CCDC173Q0VFZ6 552 aa7.28□□□□□ -1.24
CLCN3-201ENST00000347613 CDC37L1Q7L3B6 337 aa7.28□□□□□ -1.24
CLCN3-201ENST00000347613 DBNDD2Q9BQY9 259 aa7.28□□□□□ -1.24
CLCN3-201ENST00000347613 LIMCH1Q9UPQ0 1083 aa7.28□□□□□ -1.24
CLCN3-201ENST00000347613 ZNF609O15014 1411 aa7.28□□□□□ -1.24
CLCN3-201ENST00000347613 EP400Q96L91 3159 aa7.28□□□□□ -1.24
CLCN3-201ENST00000347613 FIBPO43427 364 aa7.28□□□□□ -1.24
CLCN3-201ENST00000347613 STX6O43752 255 aa7.28□□□□□ -1.24
CLCN3-201ENST00000347613 STK3Q13188 491 aa7.28□□□□□ -1.24
CLCN3-201ENST00000347613 STOX1Q6ZVD7 989 aa7.28□□□□□ -1.24
CLCN3-201ENST00000347613 SYNE4Q8N205 404 aa7.28□□□□□ -1.24
CLCN3-201ENST00000347613 TJP1Q07157 1748 aa7.27□□□□□ -1.24
CLCN3-201ENST00000347613 A1BGP04217 495 aa7.27□□□□□ -1.25
CLCN3-201ENST00000347613 GIMAP6Q6P9H5 292 aa7.27□□□□□ -1.25
CLCN3-201ENST00000347613 DDX11Q96FC9 970 aa7.27□□□□□ -1.25
CLCN3-201ENST00000347613 METTL22Q9BUU2 404 aaPredicted RBP7.27□□□□□ -1.25
CLCN3-201ENST00000347613 DIAPH3Q9NSV4 1193 aa7.27□□□□□ -1.25
CLCN3-201ENST00000347613 PDRG1Q9NUG6 133 aa7.27□□□□□ -1.25
CLCN3-201ENST00000347613 ISY1Q9ULR0 285 aaKnown RBP7.27□□□□□ -1.25
CLCN3-201ENST00000347613 TMEM94Q12767 1356 aa7.27□□□□□ -1.25
CLCN3-201ENST00000347613 MRC1P22897 1456 aa7.27□□□□□ -1.25
CLCN3-201ENST00000347613 JAK2O60674 1132 aa7.27□□□□□ -1.25
CLCN3-201ENST00000347613 F13A1P00488 732 aa7.27□□□□□ -1.25
CLCN3-201ENST00000347613 MCCP23508 829 aa7.27□□□□□ -1.25
CLCN3-201ENST00000347613 TIMM10P62072 90 aa7.27□□□□□ -1.25
CLCN3-201ENST00000347613 FOXO4P98177 505 aa7.27□□□□□ -1.25
CLCN3-201ENST00000347613 ANKRD13DQ6ZTN6 518 aa7.27□□□□□ -1.25
CLCN3-201ENST00000347613 MED23Q9ULK4 1368 aa7.27□□□□□ -1.25
CLCN3-201ENST00000347613 TAF5LO75529 589 aa7.27□□□□□ -1.25
CLCN3-201ENST00000347613 LRRC24Q50LG9 513 aa7.27□□□□□ -1.25
CLCN3-201ENST00000347613 ATG9AQ7Z3C6 839 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms