RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 RNF181Q9P0P0 153 aa20.25■□□□□ 0.83
TSPAN4-201ENST00000346501 FANCIQ9NVI1 1328 aa20.25■□□□□ 0.83
TSPAN4-201ENST00000346501 HSP90B1P14625 803 aaKnown RBP20.24■□□□□ 0.83
TSPAN4-201ENST00000346501 DIEXFQ68CQ4 756 aaKnown RBP20.24■□□□□ 0.83
TSPAN4-201ENST00000346501 NLRP10Q86W26 655 aa20.24■□□□□ 0.83
TSPAN4-201ENST00000346501 RBM17Q96I25 401 aaKnown RBP20.24■□□□□ 0.83
TSPAN4-201ENST00000346501 SH3TC1Q8TE82 1336 aa20.24■□□□□ 0.83
TSPAN4-201ENST00000346501 LMNB1P20700 586 aa20.23■□□□□ 0.83
TSPAN4-201ENST00000346501 RIC1Q4ADV7 1423 aa20.23■□□□□ 0.83
TSPAN4-201ENST00000346501 PHAXQ9H814 394 aaKnown RBP20.23■□□□□ 0.83
TSPAN4-201ENST00000346501 CCDC93Q567U6 631 aa20.22■□□□□ 0.83
TSPAN4-201ENST00000346501 ZNF526Q8TF50 670 aaPredicted RBP20.22■□□□□ 0.83
TSPAN4-201ENST00000346501 ABCC12Q96J65 1359 aa20.21■□□□□ 0.83
TSPAN4-201ENST00000346501 UTRNP46939 3433 aa20.21■□□□□ 0.83
TSPAN4-201ENST00000346501 SLC4A2P04920 1241 aa20.21■□□□□ 0.83
TSPAN4-201ENST00000346501 NEXNQ0ZGT2 675 aa20.21■□□□□ 0.83
TSPAN4-201ENST00000346501 CRY2Q49AN0 593 aa20.21■□□□□ 0.83
TSPAN4-201ENST00000346501 SLC10A5Q5PT55 438 aa20.21■□□□□ 0.83
TSPAN4-201ENST00000346501 TAOK3Q9H2K8 898 aa20.21■□□□□ 0.83
TSPAN4-201ENST00000346501 ADCY9O60503 1353 aa20.21■□□□□ 0.83
TSPAN4-201ENST00000346501 COL11A2P13942 1736 aaPredicted RBP20.2■□□□□ 0.82
TSPAN4-201ENST00000346501 ATP5J2-PTCD1G3V325 749 aa20.2■□□□□ 0.82
TSPAN4-201ENST00000346501 RASSF7Q02833 373 aa20.2■□□□□ 0.82
TSPAN4-201ENST00000346501 EXOSC9Q06265 439 aaKnown RBP20.2■□□□□ 0.82
TSPAN4-201ENST00000346501 CC2D2BQ6DHV5 1058 aa20.2■□□□□ 0.82
TSPAN4-201ENST00000346501 RTKN2Q8IZC4 609 aa20.2■□□□□ 0.82
TSPAN4-201ENST00000346501 ZC3H4Q9UPT8 1303 aaKnown RBP20.2■□□□□ 0.82
TSPAN4-201ENST00000346501 ANKRD36CQ5JPF3 1778 aa20.19■□□□□ 0.82
TSPAN4-201ENST00000346501 TRIM28Q13263 835 aaKnown RBP20.19■□□□□ 0.82
TSPAN4-201ENST00000346501 CRAMP1Q96RY5 1269 aa20.19■□□□□ 0.82
TSPAN4-201ENST00000346501 ISCA1Q9BUE6 129 aa20.19■□□□□ 0.82
TSPAN4-201ENST00000346501 TCERG1O14776 1098 aaKnown RBP20.18■□□□□ 0.82
TSPAN4-201ENST00000346501 HOXA10P31260 410 aaPredicted RBP20.18■□□□□ 0.82
TSPAN4-201ENST00000346501 GRIPAP1Q4V328 841 aa20.18■□□□□ 0.82
TSPAN4-201ENST00000346501 KSR2Q6VAB6 950 aa20.18■□□□□ 0.82
TSPAN4-201ENST00000346501 MYD88Q99836 296 aa20.18■□□□□ 0.82
TSPAN4-201ENST00000346501 KDM2BQ8NHM5 1336 aa20.18■□□□□ 0.82
TSPAN4-201ENST00000346501 E9PSI1 815 aa20.17■□□□□ 0.82
TSPAN4-201ENST00000346501 DDX46Q7L014 1031 aaKnown RBP20.17■□□□□ 0.82
TSPAN4-201ENST00000346501 CCDC191Q8NCU4 936 aa20.17■□□□□ 0.82
TSPAN4-201ENST00000346501 METTL22Q9BUU2 404 aaPredicted RBP20.17■□□□□ 0.82
TSPAN4-201ENST00000346501 LTBP3Q9NS15 1303 aa20.17■□□□□ 0.82
TSPAN4-201ENST00000346501 NFKBIEO00221 500 aa20.16■□□□□ 0.82
TSPAN4-201ENST00000346501 VAMP4O75379 141 aa20.16■□□□□ 0.82
TSPAN4-201ENST00000346501 HCLS1P14317 486 aaPredicted RBP20.16■□□□□ 0.82
TSPAN4-201ENST00000346501 CWC25Q9NXE8 425 aaPredicted RBP20.16■□□□□ 0.82
TSPAN4-201ENST00000346501 MAP3K2Q9Y2U5 619 aa20.16■□□□□ 0.82
TSPAN4-201ENST00000346501 PI4KAP2A4QPH2 592 aa20.15■□□□□ 0.82
TSPAN4-201ENST00000346501 FKBP5Q13451 457 aaPredicted RBP20.15■□□□□ 0.82
TSPAN4-201ENST00000346501 DPY19L2Q6NUT2 758 aa20.15■□□□□ 0.82
TSPAN4-201ENST00000346501 PI4KAP1Q8N8J0 262 aa20.15■□□□□ 0.82
TSPAN4-201ENST00000346501 FAM89AQ96GI7 184 aa20.15■□□□□ 0.82
TSPAN4-201ENST00000346501 SLX4Q8IY92 1834 aa20.15■□□□□ 0.82
TSPAN4-201ENST00000346501 GOLGB1Q14789 3259 aaKnown RBP20.14■□□□□ 0.82
TSPAN4-201ENST00000346501 CACNA1SQ13698 1873 aa20.14■□□□□ 0.81
TSPAN4-201ENST00000346501 ARFGEF2Q9Y6D5 1785 aa20.14■□□□□ 0.81
TSPAN4-201ENST00000346501 PPEF1O14829 653 aaPredicted RBP20.14■□□□□ 0.81
TSPAN4-201ENST00000346501 FKBP4Q02790 459 aaKnown RBP eCLIP20.14■□□□□ 0.812e-6■■■■■ 27.9
TSPAN4-201ENST00000346501 FLIIQ13045 1269 aa20.14■□□□□ 0.81
TSPAN4-201ENST00000346501 ZBTB38Q8NAP3 1195 aaPredicted RBP20.14■□□□□ 0.81
TSPAN4-201ENST00000346501 C7orf43Q8WVR3 580 aa20.14■□□□□ 0.81
TSPAN4-201ENST00000346501 ZNF521Q96K83 1311 aa20.13■□□□□ 0.81
TSPAN4-201ENST00000346501 IRS4O14654 1257 aaPredicted RBP20.13■□□□□ 0.81
TSPAN4-201ENST00000346501 BBOX1O75936 387 aa20.13■□□□□ 0.81
TSPAN4-201ENST00000346501 RTL5Q5HYW3 569 aaPredicted RBP20.13■□□□□ 0.81
TSPAN4-201ENST00000346501 C16orf71Q8IYS4 520 aaPredicted RBP20.13■□□□□ 0.81
TSPAN4-201ENST00000346501 SPINK5Q9NQ38 1064 aaPredicted RBP20.13■□□□□ 0.81
TSPAN4-201ENST00000346501 TNRC6CQ9HCJ0 1690 aaKnown RBP20.12■□□□□ 0.81
TSPAN4-201ENST00000346501 PCCAP05165 728 aaPredicted RBP20.11■□□□□ 0.81
TSPAN4-201ENST00000346501 TMC4Q7Z404 712 aa20.11■□□□□ 0.81
TSPAN4-201ENST00000346501 SYNE4Q8N205 404 aa20.11■□□□□ 0.81
TSPAN4-201ENST00000346501 ZNF428Q96B54 188 aa20.11■□□□□ 0.81
TSPAN4-201ENST00000346501 SBF1O95248 1867 aa20.11■□□□□ 0.81
TSPAN4-201ENST00000346501 CACNA1FO60840 1977 aa20.1■□□□□ 0.81
TSPAN4-201ENST00000346501 C3orf67Q6ZVT6 689 aa20.1■□□□□ 0.81
TSPAN4-201ENST00000346501 FER1L6Q2WGJ9 1857 aa20.09■□□□□ 0.81
TSPAN4-201ENST00000346501 ABCC4O15439 1325 aa20.09■□□□□ 0.81
TSPAN4-201ENST00000346501 C1QTNF8P60827 252 aa20.09■□□□□ 0.81
TSPAN4-201ENST00000346501 GRAPQ13588 217 aa20.09■□□□□ 0.81
TSPAN4-201ENST00000346501 G2E3Q7L622 706 aa20.09■□□□□ 0.81
TSPAN4-201ENST00000346501 MIER1Q8N108 512 aa20.09■□□□□ 0.81
TSPAN4-201ENST00000346501 GRAPLQ8TC17 118 aaPredicted RBP20.09■□□□□ 0.81
TSPAN4-201ENST00000346501 DNAAF4Q8WXU2 420 aa20.09■□□□□ 0.81
TSPAN4-201ENST00000346501 JDP2Q8WYK2 163 aa20.09■□□□□ 0.81
TSPAN4-201ENST00000346501 PSMD1Q99460 953 aa20.09■□□□□ 0.81
TSPAN4-201ENST00000346501 GLTPD2A6NH11 291 aa20.08■□□□□ 0.81
TSPAN4-201ENST00000346501 PDE8AO60658 829 aa20.08■□□□□ 0.81
TSPAN4-201ENST00000346501 SF3B3Q15393 1217 aaKnown RBP20.08■□□□□ 0.81
TSPAN4-201ENST00000346501 CCDC152Q4G0S7 254 aa20.08■□□□□ 0.81
TSPAN4-201ENST00000346501 SUPT20HQ8NEM7 779 aa20.08■□□□□ 0.81
TSPAN4-201ENST00000346501 ATP6V0A2Q9Y487 856 aa20.08■□□□□ 0.81
TSPAN4-201ENST00000346501 IARSP41252 1262 aaKnown RBP20.07■□□□□ 0.8
TSPAN4-201ENST00000346501 SLFN5Q08AF3 891 aa20.07■□□□□ 0.8
TSPAN4-201ENST00000346501 SP8Q8IXZ3 490 aa20.07■□□□□ 0.8
TSPAN4-201ENST00000346501 ZNF277Q9NRM2 450 aaPredicted RBP20.07■□□□□ 0.8
TSPAN4-201ENST00000346501 OLFM4Q6UX06 510 aa20.06■□□□□ 0.8
TSPAN4-201ENST00000346501 LINS1Q8NG48 757 aa20.06■□□□□ 0.8
TSPAN4-201ENST00000346501 CCDC88AQ3V6T2 1871 aa20.05■□□□□ 0.8
TSPAN4-201ENST00000346501 NEURL1BA8MQ27 555 aa20.05■□□□□ 0.8
TSPAN4-201ENST00000346501 PRELPP51888 382 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms