RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 SSR1P43307 286 aaKnown RBP13.89□□□□□ -0.19
COL12A1-202ENST00000345356 CCDC6Q16204 474 aa13.89□□□□□ -0.19
COL12A1-202ENST00000345356 CARD6Q9BX69 1037 aa13.89□□□□□ -0.19
COL12A1-202ENST00000345356 TMCO5BA8MYB1 307 aa13.88□□□□□ -0.19
COL12A1-202ENST00000345356 MTIF2P46199 727 aaKnown RBP13.88□□□□□ -0.19
COL12A1-202ENST00000345356 POTEDQ86YR6 584 aa13.88□□□□□ -0.19
COL12A1-202ENST00000345356 ANKS4BQ8N8V4 417 aa13.88□□□□□ -0.19
COL12A1-202ENST00000345356 NEK1Q96PY6 1258 aa13.88□□□□□ -0.19
COL12A1-202ENST00000345356 USP26Q9BXU7 913 aa13.88□□□□□ -0.19
COL12A1-202ENST00000345356 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.88□□□□□ -0.19
COL12A1-202ENST00000345356 FBF1Q8TES7 1133 aa13.88□□□□□ -0.19
COL12A1-202ENST00000345356 FANCD2Q9BXW9 1451 aa13.88□□□□□ -0.19
COL12A1-202ENST00000345356 DISP3Q9P2K9 1392 aa13.88□□□□□ -0.19
COL12A1-202ENST00000345356 GAPVD1Q14C86 1478 aa13.88□□□□□ -0.19
COL12A1-202ENST00000345356 TCEANC2Q96MN5 208 aa13.88□□□□□ -0.19
COL12A1-202ENST00000345356 NSRP1Q9H0G5 558 aaKnown RBP13.88□□□□□ -0.19
COL12A1-202ENST00000345356 TMEM63CQ9P1W3 806 aa13.88□□□□□ -0.19
COL12A1-202ENST00000345356 PLEKHO1Q53GL0 409 aaPredicted RBP13.87□□□□□ -0.19
COL12A1-202ENST00000345356 CAPZA3Q96KX2 299 aa13.87□□□□□ -0.19
COL12A1-202ENST00000345356 ECHDC1Q9NTX5 307 aa13.87□□□□□ -0.19
COL12A1-202ENST00000345356 PTPRCP08575 1304 aa13.87□□□□□ -0.19
COL12A1-202ENST00000345356 PSME1Q06323 249 aa13.87□□□□□ -0.19
COL12A1-202ENST00000345356 SAMD1Q6SPF0 538 aaPredicted RBP13.87□□□□□ -0.19
COL12A1-202ENST00000345356 ORC3Q9UBD5 711 aaPredicted RBP13.87□□□□□ -0.19
COL12A1-202ENST00000345356 SUPT6HQ7KZ85 1726 aaKnown RBP13.87□□□□□ -0.19
COL12A1-202ENST00000345356 ZNF75DP51815 510 aa13.87□□□□□ -0.19
COL12A1-202ENST00000345356 SOGA3Q5TF21 947 aa13.87□□□□□ -0.19
COL12A1-202ENST00000345356 VPS36Q86VN1 386 aa13.87□□□□□ -0.19
COL12A1-202ENST00000345356 B4GALNT4Q76KP1 1039 aa13.87□□□□□ -0.19
COL12A1-202ENST00000345356 NEK11Q8NG66 645 aa13.87□□□□□ -0.19
COL12A1-202ENST00000345356 KCNG4Q8TDN1 519 aa13.87□□□□□ -0.19
COL12A1-202ENST00000345356 MYL6BP14649 208 aa13.86□□□□□ -0.19
COL12A1-202ENST00000345356 PHAXQ9H814 394 aaKnown RBP13.86□□□□□ -0.19
COL12A1-202ENST00000345356 CTDP1Q9Y5B0 961 aaPredicted RBP13.86□□□□□ -0.19
COL12A1-202ENST00000345356 USP16Q9Y5T5 823 aa13.86□□□□□ -0.19
COL12A1-202ENST00000345356 PARD3Q8TEW0 1356 aa13.86□□□□□ -0.19
COL12A1-202ENST00000345356 CCDC96Q2M329 555 aa13.86□□□□□ -0.19
COL12A1-202ENST00000345356 KANK3Q6NY19 840 aa13.86□□□□□ -0.19
COL12A1-202ENST00000345356 RTL1A6NKG5 1358 aa13.86□□□□□ -0.19
COL12A1-202ENST00000345356 KIF5BP33176 963 aa13.86□□□□□ -0.19
COL12A1-202ENST00000345356 AK2P54819 239 aa13.86□□□□□ -0.19
COL12A1-202ENST00000345356 CCDC82Q8N4S0 544 aa13.86□□□□□ -0.19
COL12A1-202ENST00000345356 CPLX4Q7Z7G2 160 aa13.86□□□□□ -0.19
COL12A1-202ENST00000345356 CTAGE1Q96RT6 745 aa13.86□□□□□ -0.19
COL12A1-202ENST00000345356 TAOK3Q9H2K8 898 aa13.86□□□□□ -0.19
COL12A1-202ENST00000345356 HMG20BQ9P0W2 317 aa13.86□□□□□ -0.19
COL12A1-202ENST00000345356 CEP126Q9P2H0 1117 aa13.86□□□□□ -0.19
COL12A1-202ENST00000345356 NDUFAB1O14561 156 aa13.85□□□□□ -0.19
COL12A1-202ENST00000345356 CYLC1P35663 651 aaPredicted RBP13.85□□□□□ -0.19
COL12A1-202ENST00000345356 ARHGAP45Q92619 1136 aa13.85□□□□□ -0.19
COL12A1-202ENST00000345356 BRF1Q92994 677 aa13.85□□□□□ -0.19
COL12A1-202ENST00000345356 AKR1B10O60218 316 aa13.85□□□□□ -0.19
COL12A1-202ENST00000345356 IL16Q14005 1332 aa13.85□□□□□ -0.19
COL12A1-202ENST00000345356 TSG101Q99816 390 aa13.85□□□□□ -0.19
COL12A1-202ENST00000345356 MKRN1Q9UHC7 482 aaKnown RBP13.85□□□□□ -0.19
COL12A1-202ENST00000345356 PRPF4BQ13523 1007 aaKnown RBP13.85□□□□□ -0.19
COL12A1-202ENST00000345356 MYO1BO43795 1136 aa13.84□□□□□ -0.19
COL12A1-202ENST00000345356 CCDC129Q6ZRS4 1044 aa13.84□□□□□ -0.19
COL12A1-202ENST00000345356 GADD45BO75293 160 aaPredicted RBP13.84□□□□□ -0.19
COL12A1-202ENST00000345356 TRIM21P19474 475 aaKnown RBP13.84□□□□□ -0.19
COL12A1-202ENST00000345356 NOP2P46087 812 aaKnown RBP13.84□□□□□ -0.19
COL12A1-202ENST00000345356 ARFGAP2Q8N6H7 521 aa13.84□□□□□ -0.19
COL12A1-202ENST00000345356 CEP63Q96MT8 703 aa13.84□□□□□ -0.19
COL12A1-202ENST00000345356 NLRP2Q9NX02 1062 aa13.84□□□□□ -0.19
COL12A1-202ENST00000345356 CEP83Q9Y592 693 aa13.84□□□□□ -0.19
COL12A1-202ENST00000345356 FGFR1OPO95684 399 aaKnown RBP13.84□□□□□ -0.19
COL12A1-202ENST00000345356 SSRP1Q08945 709 aaKnown RBP13.84□□□□□ -0.19
COL12A1-202ENST00000345356 IKQ13123 557 aaPredicted RBP13.84□□□□□ -0.19
COL12A1-202ENST00000345356 C6orf163Q5TEZ5 329 aa13.84□□□□□ -0.19
COL12A1-202ENST00000345356 ANKRD44Q8N8A2 993 aa13.84□□□□□ -0.19
COL12A1-202ENST00000345356 RABEP2Q9H5N1 569 aa13.84□□□□□ -0.19
COL12A1-202ENST00000345356 CBX8Q9HC52 389 aa13.84□□□□□ -0.19
COL12A1-202ENST00000345356 GUCA1BQ9UMX6 200 aa13.84□□□□□ -0.19
COL12A1-202ENST00000345356 IDH1O75874 414 aaKnown RBP13.84□□□□□ -0.19
COL12A1-202ENST00000345356 CHMP4BP1P59074 171 aa13.84□□□□□ -0.19
COL12A1-202ENST00000345356 WDHD1O75717 1129 aaPredicted RBP13.84□□□□□ -0.19
COL12A1-202ENST00000345356 BAG1Q99933 345 aaPredicted RBP13.84□□□□□ -0.19
COL12A1-202ENST00000345356 CCDC155Q8N6L0 562 aa13.83□□□□□ -0.2
COL12A1-202ENST00000345356 MBIPQ9NS73 344 aa13.83□□□□□ -0.2
COL12A1-202ENST00000345356 GOLGA8AA7E2F4 631 aa13.83□□□□□ -0.2
COL12A1-202ENST00000345356 ATP6V1AP38606 617 aa13.83□□□□□ -0.2
COL12A1-202ENST00000345356 PLEKHM2Q8IWE5 1019 aa13.83□□□□□ -0.2
COL12A1-202ENST00000345356 CCDC196A0A1B0GTZ2 297 aa13.83□□□□□ -0.2
COL12A1-202ENST00000345356 TAF7Q15545 349 aaPredicted RBP13.83□□□□□ -0.2
COL12A1-202ENST00000345356 RAB11FIP4Q86YS3 637 aa13.83□□□□□ -0.2
COL12A1-202ENST00000345356 AIDAQ96BJ3 306 aa13.83□□□□□ -0.2
COL12A1-202ENST00000345356 ATAD2Q6PL18 1390 aa13.83□□□□□ -0.2
COL12A1-202ENST00000345356 NEBLO76041 1014 aa13.83□□□□□ -0.2
COL12A1-202ENST00000345356 MEIS3Q99687 375 aa13.83□□□□□ -0.2
COL12A1-202ENST00000345356 KIF4AO95239 1232 aa13.82□□□□□ -0.2
COL12A1-202ENST00000345356 ZBTB40Q9NUA8 1239 aa13.82□□□□□ -0.2
COL12A1-202ENST00000345356 RBM8AQ9Y5S9 174 aaKnown RBP13.82□□□□□ -0.2
COL12A1-202ENST00000345356 SLC12A7Q9Y666 1083 aa13.82□□□□□ -0.2
COL12A1-202ENST00000345356 PTPN23Q9H3S7 1636 aa13.82□□□□□ -0.2
COL12A1-202ENST00000345356 TACC1O75410 805 aa13.82□□□□□ -0.2
COL12A1-202ENST00000345356 SPATA24Q86W54 205 aa13.82□□□□□ -0.2
COL12A1-202ENST00000345356 ZNF215Q9UL58 517 aaPredicted RBP13.82□□□□□ -0.2
COL12A1-202ENST00000345356 GOLGA6CA6NDK9 693 aa13.82□□□□□ -0.2
COL12A1-202ENST00000345356 GOLGA6DP0CG33 693 aa13.82□□□□□ -0.2
COL12A1-202ENST00000345356 ZNF530Q6P9A1 599 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms