RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 PI4KAP2A4QPH2 592 aa15.07■□□□□ 0
SNCA-202ENST00000345009 POLRMTO00411 1230 aaKnown RBP15.07■□□□□ 0
SNCA-202ENST00000345009 PPP1R42Q7Z4L9 355 aa15.07■□□□□ 0
SNCA-202ENST00000345009 IFNLR1Q8IU57 520 aaPredicted RBP15.07■□□□□ 0
SNCA-202ENST00000345009 PI4KAP1Q8N8J0 262 aa15.07■□□□□ 0
SNCA-202ENST00000345009 SSH1Q8WYL5 1049 aa15.07■□□□□ 0
SNCA-202ENST00000345009 CD2APQ9Y5K6 639 aa15.07■□□□□ 0
SNCA-202ENST00000345009 C4AP0C0L4 1744 aa15.06■□□□□ 0
SNCA-202ENST00000345009 GPTP24298 496 aa15.06■□□□□ 0
SNCA-202ENST00000345009 ST5P78524 1137 aa15.06■□□□□ 0
SNCA-202ENST00000345009 DDR1Q08345 913 aa15.06■□□□□ 0
SNCA-202ENST00000345009 ZNF34Q8IZ26 560 aa15.06■□□□□ 0
SNCA-202ENST00000345009 MRPL50Q8N5N7 158 aaKnown RBP15.06■□□□□ 0
SNCA-202ENST00000345009 CNBD1Q8NA66 436 aa15.06■□□□□ 0
SNCA-202ENST00000345009 MAP3K2Q9Y2U5 619 aa15.06■□□□□ 0
SNCA-202ENST00000345009 PTPRCP08575 1304 aa15.06■□□□□ 0
SNCA-202ENST00000345009 IPO8O15397 1037 aaKnown RBP15.05■□□□□ -0
SNCA-202ENST00000345009 HSP90B1P14625 803 aaKnown RBP15.05■□□□□ -0
SNCA-202ENST00000345009 NUBP1P53384 320 aa15.05■□□□□ -0
SNCA-202ENST00000345009 RARSP54136 660 aaKnown RBP15.05■□□□□ -0
SNCA-202ENST00000345009 TRIM28Q13263 835 aaKnown RBP15.05■□□□□ -0
SNCA-202ENST00000345009 G2E3Q7L622 706 aa15.05■□□□□ -0
SNCA-202ENST00000345009 METTL22Q9BUU2 404 aaPredicted RBP15.05■□□□□ -0
SNCA-202ENST00000345009 ATP10DQ9P241 1426 aa15.05■□□□□ -0
SNCA-202ENST00000345009 KIF16BQ96L93 1317 aa15.04■□□□□ -0
SNCA-202ENST00000345009 BRPF1P55201 1214 aaPredicted RBP15.04■□□□□ -0
SNCA-202ENST00000345009 ZNF579Q8NAF0 562 aaKnown RBP15.04■□□□□ -0
SNCA-202ENST00000345009 DNAAF4Q8WXU2 420 aa15.04■□□□□ -0
SNCA-202ENST00000345009 UTP14AQ9BVJ6 771 aaKnown RBP15.04■□□□□ -0
SNCA-202ENST00000345009 BCL2L13Q9BXK5 485 aa15.04■□□□□ -0
SNCA-202ENST00000345009 PDZRN3Q9UPQ7 1066 aa15.04■□□□□ -0
SNCA-202ENST00000345009 RNF123Q5XPI4 1314 aa15.03■□□□□ -0
SNCA-202ENST00000345009 FAM177BA6PVY3 158 aa15.03■□□□□ -0
SNCA-202ENST00000345009 CCDC191Q8NCU4 936 aa15.03■□□□□ -0
SNCA-202ENST00000345009 FAM212AQ96EL1 285 aa15.03■□□□□ -0
SNCA-202ENST00000345009 PHF12Q96QT6 1004 aa15.03■□□□□ -0
SNCA-202ENST00000345009 MYD88Q99836 296 aa15.03■□□□□ -0
SNCA-202ENST00000345009 FHDC1Q9C0D6 1143 aaPredicted RBP15.03■□□□□ -0
SNCA-202ENST00000345009 LRP5O75197 1615 aa15.03■□□□□ -0
SNCA-202ENST00000345009 ATP5J2-PTCD1G3V325 749 aa15.02■□□□□ -0
SNCA-202ENST00000345009 GABBR2O75899 941 aa15.02■□□□□ -0
SNCA-202ENST00000345009 PDE6BP35913 854 aa15.02■□□□□ -0
SNCA-202ENST00000345009 TGFB2P61812 414 aa15.02■□□□□ -0
SNCA-202ENST00000345009 DCAF8Q5TAQ9 597 aa15.02■□□□□ -0
SNCA-202ENST00000345009 NLRP10Q86W26 655 aa15.02■□□□□ -0
SNCA-202ENST00000345009 SYT17Q9BSW7 474 aa15.02■□□□□ -0
SNCA-202ENST00000345009 ISCA1Q9BUE6 129 aa15.02■□□□□ -0
SNCA-202ENST00000345009 BRIP1Q9BX63 1249 aa15.02■□□□□ -0
SNCA-202ENST00000345009 API5Q9BZZ5 524 aaKnown RBP15.02■□□□□ -0
SNCA-202ENST00000345009 TRMT112Q9UI30 125 aaKnown RBP15.02■□□□□ -0
SNCA-202ENST00000345009 SCN7AQ01118 1682 aa15.02□□□□□ -0.01
SNCA-202ENST00000345009 SUSD4Q5VX71 490 aa15.01□□□□□ -0.01
SNCA-202ENST00000345009 PRR5LQ6MZQ0 368 aa15.01□□□□□ -0.01
SNCA-202ENST00000345009 LINS1Q8NG48 757 aa15.01□□□□□ -0.01
SNCA-202ENST00000345009 ARHGAP45Q92619 1136 aa15.01□□□□□ -0.01
SNCA-202ENST00000345009 CWC25Q9NXE8 425 aaPredicted RBP15.01□□□□□ -0.01
SNCA-202ENST00000345009 NOB1Q9ULX3 412 aaKnown RBP15.01□□□□□ -0.01
SNCA-202ENST00000345009 NUP98P52948 1817 aa15.01□□□□□ -0.01
SNCA-202ENST00000345009 COL24A1Q17RW2 1714 aa15□□□□□ -0.01
SNCA-202ENST00000345009 IBTKQ9P2D0 1353 aaPredicted RBP15□□□□□ -0.01
SNCA-202ENST00000345009 SH3TC1Q8TE82 1336 aa15□□□□□ -0.01
SNCA-202ENST00000345009 SLC4A10Q6U841 1118 aa15□□□□□ -0.01
SNCA-202ENST00000345009 SPOCK2Q92563 424 aa15□□□□□ -0.01
SNCA-202ENST00000345009 BCORQ6W2J9 1755 aa15□□□□□ -0.01
SNCA-202ENST00000345009 ADCY9O60503 1353 aa14.99□□□□□ -0.01
SNCA-202ENST00000345009 UBN2Q6ZU65 1347 aa14.99□□□□□ -0.01
SNCA-202ENST00000345009 H0YIN7 160 aa14.99□□□□□ -0.01
SNCA-202ENST00000345009 FRAT1Q92837 279 aaPredicted RBP14.99□□□□□ -0.01
SNCA-202ENST00000345009 RCAN3Q9UKA8 241 aa14.99□□□□□ -0.01
SNCA-202ENST00000345009 F6X3S4 739 aa14.98□□□□□ -0.01
SNCA-202ENST00000345009 ALDH1L1O75891 902 aa14.98□□□□□ -0.01
SNCA-202ENST00000345009 ZBTB38Q8NAP3 1195 aaPredicted RBP14.98□□□□□ -0.01
SNCA-202ENST00000345009 NLRP3Q96P20 1036 aa14.98□□□□□ -0.01
SNCA-202ENST00000345009 SRCIN1Q9C0H9 1055 aa14.98□□□□□ -0.01
SNCA-202ENST00000345009 NEURL1BA8MQ27 555 aa14.97□□□□□ -0.01
SNCA-202ENST00000345009 BCAR3O75815 825 aa14.97□□□□□ -0.01
SNCA-202ENST00000345009 NTSR2O95665 410 aa14.97□□□□□ -0.01
SNCA-202ENST00000345009 MS4A1P11836 297 aa14.97□□□□□ -0.01
SNCA-202ENST00000345009 ERFEQ4G0M1 354 aa14.97□□□□□ -0.01
SNCA-202ENST00000345009 SLC10A5Q5PT55 438 aa14.97□□□□□ -0.01
SNCA-202ENST00000345009 ZKSCAN2Q63HK3 967 aa14.97□□□□□ -0.01
SNCA-202ENST00000345009 NUTM1Q86Y26 1132 aa14.97□□□□□ -0.01
SNCA-202ENST00000345009 C10orf71Q711Q0 1435 aa14.97□□□□□ -0.01
SNCA-202ENST00000345009 PCCAP05165 728 aaPredicted RBP14.96□□□□□ -0.01
SNCA-202ENST00000345009 IGKV5-2P06315 115 aa14.96□□□□□ -0.01
SNCA-202ENST00000345009 CCT4P50991 539 aaKnown RBP14.96□□□□□ -0.01
SNCA-202ENST00000345009 GCKRQ14397 625 aa14.96□□□□□ -0.01
SNCA-202ENST00000345009 BEND3Q5T5X7 828 aa14.96□□□□□ -0.01
SNCA-202ENST00000345009 C2CD5Q86YS7 1000 aa14.96□□□□□ -0.01
SNCA-202ENST00000345009 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.96□□□□□ -0.01
SNCA-202ENST00000345009 FAM89AQ96GI7 184 aa14.96□□□□□ -0.01
SNCA-202ENST00000345009 C9orf78Q9NZ63 289 aaPredicted RBP14.96□□□□□ -0.01
SNCA-202ENST00000345009 A0A0G2JLW4 131 aa14.95□□□□□ -0.02
SNCA-202ENST00000345009 CWF19L2Q2TBE0 894 aaKnown RBP14.95□□□□□ -0.02
SNCA-202ENST00000345009 ATF7IPQ6VMQ6 1270 aa14.95□□□□□ -0.02
SNCA-202ENST00000345009 CCDC24Q8N4L8 307 aa14.95□□□□□ -0.02
SNCA-202ENST00000345009 RPGRQ92834 1020 aaKnown RBP14.95□□□□□ -0.02
SNCA-202ENST00000345009 PIM2Q9P1W9 311 aa14.95□□□□□ -0.02
SNCA-202ENST00000345009 HDAC5Q9UQL6 1122 aa14.95□□□□□ -0.02
SNCA-202ENST00000345009 IRS4O14654 1257 aaPredicted RBP14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms