RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 ERFEQ4G0M1 354 aa17.7■□□□□ 0.42
TPM4-202ENST00000344824 HSP90AB3PQ58FF7 597 aa17.7■□□□□ 0.42
TPM4-202ENST00000344824 PPP1R42Q7Z4L9 355 aa17.7■□□□□ 0.42
TPM4-202ENST00000344824 ZNF34Q8IZ26 560 aa17.7■□□□□ 0.42
TPM4-202ENST00000344824 PHAXQ9H814 394 aaKnown RBP17.7■□□□□ 0.42
TPM4-202ENST00000344824 FER1L6Q2WGJ9 1857 aa17.69■□□□□ 0.42
TPM4-202ENST00000344824 RASSF7Q02833 373 aa17.69■□□□□ 0.42
TPM4-202ENST00000344824 PARP10Q53GL7 1025 aa17.69■□□□□ 0.42
TPM4-202ENST00000344824 CCDC30Q5VVM6 783 aa17.69■□□□□ 0.42
TPM4-202ENST00000344824 ZNF526Q8TF50 670 aaPredicted RBP17.69■□□□□ 0.42
TPM4-202ENST00000344824 MASTLQ96GX5 879 aa17.69■□□□□ 0.42
TPM4-202ENST00000344824 IBTKQ9P2D0 1353 aaPredicted RBP17.69■□□□□ 0.42
TPM4-202ENST00000344824 NTSR2O95665 410 aa17.68■□□□□ 0.42
TPM4-202ENST00000344824 SRGNP10124 158 aa17.68■□□□□ 0.42
TPM4-202ENST00000344824 TRMT2AQ8IZ69 625 aaKnown RBP17.68■□□□□ 0.42
TPM4-202ENST00000344824 PLBD2Q8NHP8 589 aa17.68■□□□□ 0.42
TPM4-202ENST00000344824 STK31Q9BXU1 1019 aa17.68■□□□□ 0.42
TPM4-202ENST00000344824 DDX60Q8IY21 1712 aaKnown RBP17.68■□□□□ 0.42
TPM4-202ENST00000344824 C21orf2O43822 256 aa17.67■□□□□ 0.42
TPM4-202ENST00000344824 ANKRD13DQ6ZTN6 518 aa17.67■□□□□ 0.42
TPM4-202ENST00000344824 RIC3Q7Z5B4 369 aa17.67■□□□□ 0.42
TPM4-202ENST00000344824 UTP14AQ9BVJ6 771 aaKnown RBP17.67■□□□□ 0.42
TPM4-202ENST00000344824 STYK1Q6J9G0 422 aa17.66■□□□□ 0.42
TPM4-202ENST00000344824 PRPF40BQ6NWY9 871 aaKnown RBP17.66■□□□□ 0.42
TPM4-202ENST00000344824 CNKSR1Q969H4 720 aa17.66■□□□□ 0.42
TPM4-202ENST00000344824 CHMP4AQ9BY43 222 aa17.66■□□□□ 0.42
TPM4-202ENST00000344824 ADCY9O60503 1353 aa17.66■□□□□ 0.42
TPM4-202ENST00000344824 DICER1Q9UPY3 1922 aaKnown RBP17.65■□□□□ 0.42
TPM4-202ENST00000344824 ATP5J2-PTCD1G3V325 749 aa17.65■□□□□ 0.42
TPM4-202ENST00000344824 NPR1P16066 1061 aa17.65■□□□□ 0.42
TPM4-202ENST00000344824 EXOSC9Q06265 439 aaKnown RBP17.65■□□□□ 0.42
TPM4-202ENST00000344824 TCIRG1Q13488 830 aa17.65■□□□□ 0.42
TPM4-202ENST00000344824 RNF181Q9P0P0 153 aa17.65■□□□□ 0.42
TPM4-202ENST00000344824 TRMT112Q9UI30 125 aaKnown RBP17.65■□□□□ 0.42
TPM4-202ENST00000344824 TAF1P21675 1872 aa17.65■□□□□ 0.42
TPM4-202ENST00000344824 C9orf131Q5VYM1 1079 aa17.64■□□□□ 0.42
TPM4-202ENST00000344824 NLRP10Q86W26 655 aa17.64■□□□□ 0.42
TPM4-202ENST00000344824 RPGRQ92834 1020 aaKnown RBP17.64■□□□□ 0.42
TPM4-202ENST00000344824 RIC1Q4ADV7 1423 aa17.64■□□□□ 0.41
TPM4-202ENST00000344824 DDX58O95786 925 aaKnown RBP17.63■□□□□ 0.41
TPM4-202ENST00000344824 MYD88Q99836 296 aa17.63■□□□□ 0.41
TPM4-202ENST00000344824 RTL5Q5HYW3 569 aaPredicted RBP17.62■□□□□ 0.41
TPM4-202ENST00000344824 GPBP1L1Q9HC44 474 aaPredicted RBP17.62■□□□□ 0.41
TPM4-202ENST00000344824 SH3TC1Q8TE82 1336 aa17.62■□□□□ 0.41
TPM4-202ENST00000344824 SLC4A2P04920 1241 aa17.61■□□□□ 0.41
TPM4-202ENST00000344824 HCLS1P14317 486 aaPredicted RBP17.61■□□□□ 0.41
TPM4-202ENST00000344824 C3orf67Q6ZVT6 689 aa17.61■□□□□ 0.41
TPM4-202ENST00000344824 SYNE4Q8N205 404 aa17.61■□□□□ 0.41
TPM4-202ENST00000344824 NLRP3Q96P20 1036 aa17.61■□□□□ 0.41
TPM4-202ENST00000344824 RNF123Q5XPI4 1314 aa17.61■□□□□ 0.41
TPM4-202ENST00000344824 MYH3P11055 1940 aa17.61■□□□□ 0.41
TPM4-202ENST00000344824 KLRG2A4D1S0 409 aaPredicted RBP17.6■□□□□ 0.41
TPM4-202ENST00000344824 NFKBIEO00221 500 aa17.6■□□□□ 0.41
TPM4-202ENST00000344824 ALDH1B1P30837 517 aa17.6■□□□□ 0.41
TPM4-202ENST00000344824 RBM17Q96I25 401 aaKnown RBP17.6■□□□□ 0.41
TPM4-202ENST00000344824 HOXD11P31277 338 aaPredicted RBP17.59■□□□□ 0.41
TPM4-202ENST00000344824 CRY2Q49AN0 593 aa17.59■□□□□ 0.41
TPM4-202ENST00000344824 CCDC93Q567U6 631 aa17.59■□□□□ 0.41
TPM4-202ENST00000344824 OLFM4Q6UX06 510 aa17.59■□□□□ 0.41
TPM4-202ENST00000344824 G2E3Q7L622 706 aa17.59■□□□□ 0.41
TPM4-202ENST00000344824 FAM89AQ96GI7 184 aa17.59■□□□□ 0.41
TPM4-202ENST00000344824 ISCA1Q9BUE6 129 aa17.59■□□□□ 0.41
TPM4-202ENST00000344824 TAOK3Q9H2K8 898 aa17.59■□□□□ 0.41
TPM4-202ENST00000344824 RCAN3Q9UKA8 241 aa17.59■□□□□ 0.41
TPM4-202ENST00000344824 MAP3K2Q9Y2U5 619 aa17.59■□□□□ 0.41
TPM4-202ENST00000344824 SPEF2Q9C093 1822 aa17.58■□□□□ 0.41
TPM4-202ENST00000344824 LMNB1P20700 586 aa17.58■□□□□ 0.41
TPM4-202ENST00000344824 FKBP5Q13451 457 aaPredicted RBP17.58■□□□□ 0.41
TPM4-202ENST00000344824 SOGA3Q5TF21 947 aa17.58■□□□□ 0.41
TPM4-202ENST00000344824 PI4KAP2A4QPH2 592 aa17.57■□□□□ 0.4
TPM4-202ENST00000344824 VAMP4O75379 141 aa17.57■□□□□ 0.4
TPM4-202ENST00000344824 PI4KAP1Q8N8J0 262 aa17.57■□□□□ 0.4
TPM4-202ENST00000344824 PPEF1O14829 653 aaPredicted RBP17.56■□□□□ 0.4
TPM4-202ENST00000344824 NEXNQ0ZGT2 675 aa17.56■□□□□ 0.4
TPM4-202ENST00000344824 FLIIQ13045 1269 aa17.56■□□□□ 0.4
TPM4-202ENST00000344824 KSR2Q6VAB6 950 aa17.56■□□□□ 0.4
TPM4-202ENST00000344824 METTL22Q9BUU2 404 aaPredicted RBP17.56■□□□□ 0.4
TPM4-202ENST00000344824 SUPT16HQ9Y5B9 1047 aaKnown RBP17.56■□□□□ 0.4
TPM4-202ENST00000344824 ABCC4O15439 1325 aa17.56■□□□□ 0.4
TPM4-202ENST00000344824 PRELPP51888 382 aa17.55■□□□□ 0.4
TPM4-202ENST00000344824 IRS4O14654 1257 aaPredicted RBP17.55■□□□□ 0.4
TPM4-202ENST00000344824 SLC51AQ86UW1 340 aa17.55■□□□□ 0.4
TPM4-202ENST00000344824 JARID2Q92833 1246 aaPredicted RBP17.55■□□□□ 0.4
TPM4-202ENST00000344824 CWC25Q9NXE8 425 aaPredicted RBP17.55■□□□□ 0.4
TPM4-202ENST00000344824 SLC10A5Q5PT55 438 aa17.54■□□□□ 0.4
TPM4-202ENST00000344824 DDX46Q7L014 1031 aaKnown RBP17.54■□□□□ 0.4
TPM4-202ENST00000344824 CRAMP1Q96RY5 1269 aa17.54■□□□□ 0.4
TPM4-202ENST00000344824 BCL2L13Q9BXK5 485 aa17.54■□□□□ 0.4
TPM4-202ENST00000344824 HOXA10P31260 410 aaPredicted RBP17.53■□□□□ 0.4
TPM4-202ENST00000344824 CWF19L2Q2TBE0 894 aaKnown RBP17.53■□□□□ 0.4
TPM4-202ENST00000344824 CCDC191Q8NCU4 936 aa17.53■□□□□ 0.4
TPM4-202ENST00000344824 C7orf43Q8WVR3 580 aa17.53■□□□□ 0.4
TPM4-202ENST00000344824 TMX4Q9H1E5 349 aaPredicted RBP17.53■□□□□ 0.4
TPM4-202ENST00000344824 LTBP3Q9NS15 1303 aa17.52■□□□□ 0.4
TPM4-202ENST00000344824 FKBP4Q02790 459 aaKnown RBP eCLIP17.52■□□□□ 0.4
TPM4-202ENST00000344824 TRIM28Q13263 835 aaKnown RBP17.52■□□□□ 0.4
TPM4-202ENST00000344824 RTKN2Q8IZC4 609 aa17.52■□□□□ 0.4
TPM4-202ENST00000344824 ZBTB38Q8NAP3 1195 aaPredicted RBP17.52■□□□□ 0.4
TPM4-202ENST00000344824 ZNF277Q9NRM2 450 aaPredicted RBP17.52■□□□□ 0.4
TPM4-202ENST00000344824 KDM2BQ8NHM5 1336 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms