RNA–Protein interactions for RNA: ENST00000344586.8

NKX2-3-201, Transcript of NK2 homeobox 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NKX2-3, Length 2,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3-201ENST00000344586 HDAC5Q9UQL6 1122 aa27.63■■■□□ 2.01
NKX2-3-201ENST00000344586 KDM4AO75164 1064 aa27.63■■■□□ 2.01
NKX2-3-201ENST00000344586 ZKSCAN1P17029 563 aaPredicted RBP27.63■■■□□ 2.01
NKX2-3-201ENST00000344586 NMIQ13287 307 aaPredicted RBP27.63■■■□□ 2.01
NKX2-3-201ENST00000344586 NECAB1Q8N987 351 aa27.63■■■□□ 2.01
NKX2-3-201ENST00000344586 PIBF1Q8WXW3 757 aa27.63■■■□□ 2.01
NKX2-3-201ENST00000344586 MAP4K1Q92918 833 aa27.63■■■□□ 2.01
NKX2-3-201ENST00000344586 SNRKQ9NRH2 765 aa27.63■■■□□ 2.01
NKX2-3-201ENST00000344586 UTYO14607 1347 aa27.62■■■□□ 2.01
NKX2-3-201ENST00000344586 SIPA1L3O60292 1781 aaPredicted RBP27.62■■■□□ 2.01
NKX2-3-201ENST00000344586 VPS37CA5D8V6 355 aaPredicted RBP27.62■■■□□ 2.01
NKX2-3-201ENST00000344586 C1orf141Q5JVX7 400 aa27.62■■■□□ 2.01
NKX2-3-201ENST00000344586 EAF2Q96CJ1 260 aaPredicted RBP27.61■■■□□ 2.01
NKX2-3-201ENST00000344586 GRM8O00222 908 aa27.61■■■□□ 2.01
NKX2-3-201ENST00000344586 COL9A3Q14050 684 aaPredicted RBP27.61■■■□□ 2.01
NKX2-3-201ENST00000344586 LINS1Q8NG48 757 aa27.61■■■□□ 2.01
NKX2-3-201ENST00000344586 HIP1O00291 1037 aa27.6■■■□□ 2.01
NKX2-3-201ENST00000344586 MAP7D2Q96T17 732 aa27.6■■■□□ 2.01
NKX2-3-201ENST00000344586 BICC1Q9H694 974 aaKnown RBP27.6■■■□□ 2.01
NKX2-3-201ENST00000344586 SLC27A2O14975 620 aa27.6■■■□□ 2.01
NKX2-3-201ENST00000344586 TTC12Q9H892 705 aaPredicted RBP27.6■■■□□ 2.01
NKX2-3-201ENST00000344586 TLR7Q9NYK1 1049 aaKnown RBP27.6■■■□□ 2.01
NKX2-3-201ENST00000344586 CAMTA1Q9Y6Y1 1673 aa27.59■■■□□ 2.01
NKX2-3-201ENST00000344586 PSME1Q06323 249 aa27.59■■■□□ 2.01
NKX2-3-201ENST00000344586 NPHP4O75161 1426 aaPredicted RBP27.59■■■□□ 2.01
NKX2-3-201ENST00000344586 A0A0D9SFI3 127 aa27.58■■■□□ 2.01
NKX2-3-201ENST00000344586 KCNJ4P48050 445 aa27.58■■■□□ 2.01
NKX2-3-201ENST00000344586 RBM33Q96EV2 1170 aaKnown RBP27.58■■■□□ 2.01
NKX2-3-201ENST00000344586 CCDC8Q9H0W5 538 aaPredicted RBP27.58■■■□□ 2.01
NKX2-3-201ENST00000344586 MRC1P22897 1456 aa27.57■■■□□ 2
NKX2-3-201ENST00000344586 MED23Q9ULK4 1368 aa27.57■■■□□ 2
NKX2-3-201ENST00000344586 SLIT3O75094 1523 aa27.57■■■□□ 2
NKX2-3-201ENST00000344586 AP5Z1O43299 807 aa27.56■■■□□ 2
NKX2-3-201ENST00000344586 G3BP1Q13283 466 aaKnown RBP eCLIP27.56■■■□□ 2
NKX2-3-201ENST00000344586 CDC37L1Q7L3B6 337 aa27.56■■■□□ 2
NKX2-3-201ENST00000344586 ADAMTS7Q9UKP4 1686 aa27.56■■■□□ 2
NKX2-3-201ENST00000344586 PSMA5P28066 241 aa27.56■■■□□ 2
NKX2-3-201ENST00000344586 NOLC1Q14978 699 aaKnown RBP eCLIP27.56■■■□□ 2
NKX2-3-201ENST00000344586 ESCO1Q5FWF5 840 aa27.56■■■□□ 2
NKX2-3-201ENST00000344586 JCADQ9P266 1359 aa27.55■■■□□ 2
NKX2-3-201ENST00000344586 TTC6Q86TZ1 520 aa27.55■■■□□ 2
NKX2-3-201ENST00000344586 LARP1BQ659C4 914 aaKnown RBP27.55■■■□□ 2
NKX2-3-201ENST00000344586 ARHGEF25Q86VW2 580 aa27.55■■■□□ 2
NKX2-3-201ENST00000344586 LMTK3Q96Q04 1460 aa27.55■■■□□ 2
NKX2-3-201ENST00000344586 C17orf53Q8N3J3 647 aaPredicted RBP27.54■■■□□ 2
NKX2-3-201ENST00000344586 DDX21Q9NR30 783 aaKnown RBP eCLIP27.54■■■□□ 2
NKX2-3-201ENST00000344586 SPTLC3Q9NUV7 552 aa27.54■■■□□ 2
NKX2-3-201ENST00000344586 TAF6LQ9Y6J9 622 aa27.54■■■□□ 2
NKX2-3-201ENST00000344586 DDX58O95786 925 aaKnown RBP27.53■■■□□ 2
NKX2-3-201ENST00000344586 KRT85P78386 507 aa27.53■■■□□ 2
NKX2-3-201ENST00000344586 PDIA6Q15084 440 aa27.53■■■□□ 2
NKX2-3-201ENST00000344586 MYRIPQ8NFW9 859 aa27.53■■■□□ 2
NKX2-3-201ENST00000344586 FSD1Q9BTV5 496 aa27.53■■■□□ 2
NKX2-3-201ENST00000344586 ELP1O95163 1332 aa27.53■■■□□ 2
NKX2-3-201ENST00000344586 IGKV5-2P06315 115 aa27.53■■■□□ 2
NKX2-3-201ENST00000344586 ANKRD24Q8TF21 1146 aa27.53■■■□□ 2
NKX2-3-201ENST00000344586 BOLA2Q9H3K6 86 aa27.53■■■□□ 2
NKX2-3-201ENST00000344586 GCP02774 474 aa27.52■■■□□ 2
NKX2-3-201ENST00000344586 RPS6KB1P23443 525 aa27.52■■■□□ 2
NKX2-3-201ENST00000344586 DNTTIP2Q5QJE6 756 aaKnown RBP27.52■■■□□ 2
NKX2-3-201ENST00000344586 BLOC1S2Q6QNY1 142 aa27.52■■■□□ 2
NKX2-3-201ENST00000344586 SIL1Q9H173 461 aa27.52■■■□□ 2
NKX2-3-201ENST00000344586 ALDH8A1Q9H2A2 487 aaPredicted RBP27.52■■■□□ 2
NKX2-3-201ENST00000344586 CCDC192P0DO97 292 aa27.52■■■□□ 2
NKX2-3-201ENST00000344586 PDIA4P13667 645 aaKnown RBP27.52■■■□□ 2
NKX2-3-201ENST00000344586 AIMP1Q12904 312 aaKnown RBP27.52■■■□□ 2
NKX2-3-201ENST00000344586 FERMT3Q86UX7 667 aa27.52■■■□□ 2
NKX2-3-201ENST00000344586 TCEANC2Q96MN5 208 aa27.52■■■□□ 2
NKX2-3-201ENST00000344586 TOB2Q14106 344 aaPredicted RBP27.51■■□□□ 1.99
NKX2-3-201ENST00000344586 ANKRD1Q15327 319 aa27.51■■□□□ 1.99
NKX2-3-201ENST00000344586 RNF20Q5VTR2 975 aa27.51■■□□□ 1.99
NKX2-3-201ENST00000344586 C5P01031 1676 aa27.51■■□□□ 1.99
NKX2-3-201ENST00000344586 PDCP20941 246 aa27.5■■□□□ 1.99
NKX2-3-201ENST00000344586 PLCB2Q00722 1185 aa27.5■■□□□ 1.99
NKX2-3-201ENST00000344586 FAM173BQ6P4H8 233 aa27.5■■□□□ 1.99
NKX2-3-201ENST00000344586 ZNF589Q86UQ0 364 aaPredicted RBP27.5■■□□□ 1.99
NKX2-3-201ENST00000344586 KLHDC4Q8TBB5 520 aa27.5■■□□□ 1.99
NKX2-3-201ENST00000344586 PRIMPOLQ96LW4 560 aa27.5■■□□□ 1.99
NKX2-3-201ENST00000344586 ZMYND15Q9H091 742 aa27.5■■□□□ 1.99
NKX2-3-201ENST00000344586 LIG1P18858 919 aa27.49■■□□□ 1.99
NKX2-3-201ENST00000344586 MTERF4Q7Z6M4 381 aaKnown RBP27.49■■□□□ 1.99
NKX2-3-201ENST00000344586 KCNF1Q9H3M0 494 aa27.48■■□□□ 1.99
NKX2-3-201ENST00000344586 NUP62CLQ9H1M0 184 aa27.47■■□□□ 1.99
NKX2-3-201ENST00000344586 MAP3K11Q16584 847 aa27.47■■□□□ 1.99
NKX2-3-201ENST00000344586 TSGA10IPQ3SY00 556 aa27.47■■□□□ 1.99
NKX2-3-201ENST00000344586 HMG20BQ9P0W2 317 aa27.47■■□□□ 1.99
NKX2-3-201ENST00000344586 NEURL1BA8MQ27 555 aa27.46■■□□□ 1.99
NKX2-3-201ENST00000344586 RIC3Q7Z5B4 369 aa27.46■■□□□ 1.99
NKX2-3-201ENST00000344586 MRVI1Q9Y6F6 885 aa27.46■■□□□ 1.99
NKX2-3-201ENST00000344586 EPHA10Q5JZY3 1008 aa27.45■■□□□ 1.99
NKX2-3-201ENST00000344586 LARP1Q6PKG0 1096 aaKnown RBP27.45■■□□□ 1.99
NKX2-3-201ENST00000344586 FAM200AQ8TCP9 573 aa27.45■■□□□ 1.99
NKX2-3-201ENST00000344586 AXIN2Q9Y2T1 843 aa27.45■■□□□ 1.99
NKX2-3-201ENST00000344586 TAF5LO75529 589 aa27.45■■□□□ 1.98
NKX2-3-201ENST00000344586 HMGN5P82970 282 aaKnown RBP27.45■■□□□ 1.98
NKX2-3-201ENST00000344586 CHMP3Q9Y3E7 222 aa27.45■■□□□ 1.98
NKX2-3-201ENST00000344586 COL15A1P39059 1388 aa27.45■■□□□ 1.98
NKX2-3-201ENST00000344586 GTF2F1P35269 517 aaKnown RBP eCLIP27.44■■□□□ 1.98
NKX2-3-201ENST00000344586 TYRO3Q06418 890 aa27.44■■□□□ 1.98
NKX2-3-201ENST00000344586 KIAA1524Q8TCG1 905 aa27.44■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms