RNA–Protein interactions for RNA: ENST00000344391.9

CEACAM1-202, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,619 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-202ENST00000344391 NARFQ9UHQ1 456 aa20.38■□□□□ 0.85
CEACAM1-202ENST00000344391 PDZRN3Q9UPQ7 1066 aa20.38■□□□□ 0.85
CEACAM1-202ENST00000344391 C4AP0C0L4 1744 aa20.37■□□□□ 0.85
CEACAM1-202ENST00000344391 POLA2Q14181 598 aa20.37■□□□□ 0.85
CEACAM1-202ENST00000344391 ARHGEF1Q92888 912 aaKnown RBP20.37■□□□□ 0.85
CEACAM1-202ENST00000344391 BICC1Q9H694 974 aaKnown RBP20.37■□□□□ 0.85
CEACAM1-202ENST00000344391 ZNF652Q9Y2D9 606 aa20.37■□□□□ 0.85
CEACAM1-202ENST00000344391 UBN2Q6ZU65 1347 aa20.36■□□□□ 0.85
CEACAM1-202ENST00000344391 PCCAP05165 728 aaPredicted RBP20.36■□□□□ 0.85
CEACAM1-202ENST00000344391 EPHA10Q5JZY3 1008 aa20.36■□□□□ 0.85
CEACAM1-202ENST00000344391 SKAP1Q86WV1 359 aa20.36■□□□□ 0.85
CEACAM1-202ENST00000344391 SRGAP3O43295 1099 aa20.35■□□□□ 0.85
CEACAM1-202ENST00000344391 ADRA2BP18089 450 aa20.35■□□□□ 0.85
CEACAM1-202ENST00000344391 TRAPPC3LQ5T215 181 aa20.35■□□□□ 0.85
CEACAM1-202ENST00000344391 PELP1Q8IZL8 1130 aaKnown RBP20.35■□□□□ 0.85
CEACAM1-202ENST00000344391 ZBTB38Q8NAP3 1195 aaPredicted RBP20.35■□□□□ 0.85
CEACAM1-202ENST00000344391 NUCB1Q02818 461 aa20.35■□□□□ 0.85
CEACAM1-202ENST00000344391 BCL2L12Q9HB09 334 aa20.35■□□□□ 0.85
CEACAM1-202ENST00000344391 ZPR1O75312 459 aa20.34■□□□□ 0.85
CEACAM1-202ENST00000344391 RABL6Q3YEC7 729 aaPredicted RBP20.34■□□□□ 0.85
CEACAM1-202ENST00000344391 RTL5Q5HYW3 569 aaPredicted RBP20.34■□□□□ 0.85
CEACAM1-202ENST00000344391 USPL1Q5W0Q7 1092 aa20.34■□□□□ 0.85
CEACAM1-202ENST00000344391 SRP68Q9UHB9 627 aaKnown RBP20.34■□□□□ 0.85
CEACAM1-202ENST00000344391 PHF14O94880 888 aa20.33■□□□□ 0.84
CEACAM1-202ENST00000344391 FOXO4P98177 505 aa20.33■□□□□ 0.84
CEACAM1-202ENST00000344391 PARP10Q53GL7 1025 aa20.33■□□□□ 0.84
CEACAM1-202ENST00000344391 FAM89AQ96GI7 184 aa20.33■□□□□ 0.84
CEACAM1-202ENST00000344391 CDHR2Q9BYE9 1310 aa20.32■□□□□ 0.84
CEACAM1-202ENST00000344391 USP42Q9H9J4 1324 aaKnown RBP20.32■□□□□ 0.84
CEACAM1-202ENST00000344391 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.32■□□□□ 0.84
CEACAM1-202ENST00000344391 SSFA2P28290 1259 aa20.32■□□□□ 0.84
CEACAM1-202ENST00000344391 RFC4P35249 363 aa20.32■□□□□ 0.84
CEACAM1-202ENST00000344391 NIP7Q9Y221 180 aaKnown RBP eCLIP20.32■□□□□ 0.84
CEACAM1-202ENST00000344391 ANKRD45Q5TZF3 282 aa20.31■□□□□ 0.84
CEACAM1-202ENST00000344391 SUSD4Q5VX71 490 aa20.31■□□□□ 0.84
CEACAM1-202ENST00000344391 AKT1S1Q96B36 256 aa20.31■□□□□ 0.84
CEACAM1-202ENST00000344391 CAMKK2Q96RR4 588 aa20.31■□□□□ 0.84
CEACAM1-202ENST00000344391 PLA2G12BQ9BX93 195 aa20.31■□□□□ 0.84
CEACAM1-202ENST00000344391 TRMT112Q9UI30 125 aaKnown RBP20.31■□□□□ 0.84
CEACAM1-202ENST00000344391 CHD1LQ86WJ1 897 aa20.31■□□□□ 0.84
CEACAM1-202ENST00000344391 EXOC6BQ9Y2D4 811 aa20.31■□□□□ 0.84
CEACAM1-202ENST00000344391 EN1Q05925 392 aaPredicted RBP20.3■□□□□ 0.84
CEACAM1-202ENST00000344391 ZNF827Q17R98 1081 aa20.3■□□□□ 0.84
CEACAM1-202ENST00000344391 TUBGCP6Q96RT7 1819 aa20.29■□□□□ 0.84
CEACAM1-202ENST00000344391 LMBR1LQ6UX01 489 aa20.29■□□□□ 0.84
CEACAM1-202ENST00000344391 SYNE4Q8N205 404 aa20.29■□□□□ 0.84
CEACAM1-202ENST00000344391 UTP14AQ9BVJ6 771 aaKnown RBP20.29■□□□□ 0.84
CEACAM1-202ENST00000344391 NOP58Q9Y2X3 529 aaKnown RBP20.29■□□□□ 0.84
CEACAM1-202ENST00000344391 MYH3P11055 1940 aa20.29■□□□□ 0.84
CEACAM1-202ENST00000344391 SURF6O75683 361 aaKnown RBP20.28■□□□□ 0.84
CEACAM1-202ENST00000344391 NTSR2O95665 410 aa20.28■□□□□ 0.84
CEACAM1-202ENST00000344391 RGS3P49796 1198 aa20.28■□□□□ 0.84
CEACAM1-202ENST00000344391 EZH2Q15910 746 aaKnown RBP20.28■□□□□ 0.84
CEACAM1-202ENST00000344391 TBC1D9BQ66K14 1250 aa20.28■□□□□ 0.84
CEACAM1-202ENST00000344391 LNPKQ9C0E8 428 aa20.28■□□□□ 0.84
CEACAM1-202ENST00000344391 PDE4AP27815 886 aa20.27■□□□□ 0.84
CEACAM1-202ENST00000344391 SF3B2Q13435 895 aaKnown RBP20.27■□□□□ 0.84
CEACAM1-202ENST00000344391 COL24A1Q17RW2 1714 aa20.27■□□□□ 0.84
CEACAM1-202ENST00000344391 SH3TC1Q8TE82 1336 aa20.27■□□□□ 0.84
CEACAM1-202ENST00000344391 IRS4O14654 1257 aaPredicted RBP20.27■□□□□ 0.83
CEACAM1-202ENST00000344391 RFX5P48382 616 aaPredicted RBP20.27■□□□□ 0.83
CEACAM1-202ENST00000344391 TFCP2L1Q9NZI6 479 aa20.27■□□□□ 0.83
CEACAM1-202ENST00000344391 FAM177BA6PVY3 158 aa20.26■□□□□ 0.83
CEACAM1-202ENST00000344391 RAB11FIP3O75154 756 aa20.26■□□□□ 0.83
CEACAM1-202ENST00000344391 BAG6P46379 1132 aa20.26■□□□□ 0.83
CEACAM1-202ENST00000344391 PA2G4Q9UQ80 394 aaKnown RBP20.26■□□□□ 0.83
CEACAM1-202ENST00000344391 LAMB2P55268 1798 aa20.26■□□□□ 0.83
CEACAM1-202ENST00000344391 DDX60Q8IY21 1712 aaKnown RBP20.25■□□□□ 0.83
CEACAM1-202ENST00000344391 APBB1O00213 710 aa20.25■□□□□ 0.83
CEACAM1-202ENST00000344391 CSF1RP07333 972 aa20.25■□□□□ 0.83
CEACAM1-202ENST00000344391 HSP90AB4PQ58FF6 505 aa20.25■□□□□ 0.83
CEACAM1-202ENST00000344391 BICDL1Q6ZP65 573 aa20.25■□□□□ 0.83
CEACAM1-202ENST00000344391 SETDB2Q96T68 719 aa20.25■□□□□ 0.83
CEACAM1-202ENST00000344391 PDE8AO60658 829 aa20.24■□□□□ 0.83
CEACAM1-202ENST00000344391 GYS1P13807 737 aa20.24■□□□□ 0.83
CEACAM1-202ENST00000344391 LRRCC1Q9C099 1032 aa20.24■□□□□ 0.83
CEACAM1-202ENST00000344391 COPRSQ9NQ92 184 aa20.24■□□□□ 0.83
CEACAM1-202ENST00000344391 SMARCA5O60264 1052 aaPredicted RBP20.24■□□□□ 0.83
CEACAM1-202ENST00000344391 PTPN12Q05209 780 aaKnown RBP20.24■□□□□ 0.83
CEACAM1-202ENST00000344391 FLAD1Q8NFF5 587 aa20.24■□□□□ 0.83
CEACAM1-202ENST00000344391 ZBTB47Q9UFB7 747 aaPredicted RBP20.24■□□□□ 0.83
CEACAM1-202ENST00000344391 CHMP3Q9Y3E7 222 aa20.24■□□□□ 0.83
CEACAM1-202ENST00000344391 TTLL11Q8NHH1 800 aa20.23■□□□□ 0.83
CEACAM1-202ENST00000344391 HSP90B1P14625 803 aaKnown RBP20.22■□□□□ 0.83
CEACAM1-202ENST00000344391 CTSWP56202 376 aa20.22■□□□□ 0.83
CEACAM1-202ENST00000344391 DEFB132Q7Z7B7 95 aa20.22■□□□□ 0.83
CEACAM1-202ENST00000344391 NUTM1Q86Y26 1132 aa20.22■□□□□ 0.83
CEACAM1-202ENST00000344391 CCDC125Q86Z20 511 aa20.22■□□□□ 0.83
CEACAM1-202ENST00000344391 KLHDC4Q8TBB5 520 aa20.22■□□□□ 0.83
CEACAM1-202ENST00000344391 HCLS1P14317 486 aaPredicted RBP20.21■□□□□ 0.83
CEACAM1-202ENST00000344391 NFIXQ14938 502 aa20.21■□□□□ 0.83
CEACAM1-202ENST00000344391 COL23A1Q86Y22 540 aaPredicted RBP20.21■□□□□ 0.83
CEACAM1-202ENST00000344391 RHPN1Q8TCX5 695 aa20.21■□□□□ 0.83
CEACAM1-202ENST00000344391 KIF1BPQ96EK5 621 aa20.21■□□□□ 0.83
CEACAM1-202ENST00000344391 NYXQ9GZU5 481 aa20.21■□□□□ 0.83
CEACAM1-202ENST00000344391 G3BP1Q13283 466 aaKnown RBP eCLIP20.2■□□□□ 0.82
CEACAM1-202ENST00000344391 OS9Q13438 667 aaPredicted RBP20.2■□□□□ 0.82
CEACAM1-202ENST00000344391 ERC1Q8IUD2 1116 aa20.2■□□□□ 0.82
CEACAM1-202ENST00000344391 ANO8Q9HCE9 1232 aaPredicted RBP20.2■□□□□ 0.82
CEACAM1-202ENST00000344391 QSER1Q2KHR3 1735 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms