RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 TSR2Q969E8 191 aaKnown RBP20.75■□□□□ 0.91
ATG4B-201ENST00000344376 GOLGA2Q08379 1002 aa20.74■□□□□ 0.91
ATG4B-201ENST00000344376 NLRP10Q86W26 655 aa20.74■□□□□ 0.91
ATG4B-201ENST00000344376 TAOK3Q9H2K8 898 aa20.74■□□□□ 0.91
ATG4B-201ENST00000344376 SALL2Q9Y467 1007 aaPredicted RBP20.74■□□□□ 0.91
ATG4B-201ENST00000344376 ARFGEF2Q9Y6D5 1785 aa20.74■□□□□ 0.91
ATG4B-201ENST00000344376 TNRC6CQ9HCJ0 1690 aaKnown RBP20.74■□□□□ 0.91
ATG4B-201ENST00000344376 CCDC93Q567U6 631 aa20.73■□□□□ 0.91
ATG4B-201ENST00000344376 KDM2BQ8NHM5 1336 aa20.73■□□□□ 0.91
ATG4B-201ENST00000344376 LTBP3Q9NS15 1303 aa20.73■□□□□ 0.91
ATG4B-201ENST00000344376 WDR63Q8IWG1 891 aa20.72■□□□□ 0.91
ATG4B-201ENST00000344376 NLRP3Q96P20 1036 aa20.72■□□□□ 0.91
ATG4B-201ENST00000344376 ANKRD36CQ5JPF3 1778 aa20.72■□□□□ 0.91
ATG4B-201ENST00000344376 SLX4Q8IY92 1834 aa20.72■□□□□ 0.91
ATG4B-201ENST00000344376 RBM17Q96I25 401 aaKnown RBP20.72■□□□□ 0.91
ATG4B-201ENST00000344376 TRMT112Q9UI30 125 aaKnown RBP20.72■□□□□ 0.91
ATG4B-201ENST00000344376 RIC3Q7Z5B4 369 aa20.71■□□□□ 0.91
ATG4B-201ENST00000344376 STK31Q9BXU1 1019 aa20.71■□□□□ 0.91
ATG4B-201ENST00000344376 SH3TC1Q8TE82 1336 aa20.71■□□□□ 0.91
ATG4B-201ENST00000344376 DDX58O95786 925 aaKnown RBP20.7■□□□□ 0.9
ATG4B-201ENST00000344376 HOXA10P31260 410 aaPredicted RBP20.7■□□□□ 0.9
ATG4B-201ENST00000344376 SLC10A5Q5PT55 438 aa20.7■□□□□ 0.9
ATG4B-201ENST00000344376 TSPYL6Q8N831 410 aa20.7■□□□□ 0.9
ATG4B-201ENST00000344376 C7orf43Q8WVR3 580 aa20.7■□□□□ 0.9
ATG4B-201ENST00000344376 CACNA1SQ13698 1873 aa20.7■□□□□ 0.9
ATG4B-201ENST00000344376 SBF1O95248 1867 aa20.69■□□□□ 0.9
ATG4B-201ENST00000344376 TWISTNBQ3B726 338 aaPredicted RBP20.69■□□□□ 0.9
ATG4B-201ENST00000344376 RTKN2Q8IZC4 609 aa20.69■□□□□ 0.9
ATG4B-201ENST00000344376 PRELPP51888 382 aa20.68■□□□□ 0.9
ATG4B-201ENST00000344376 CRAMP1Q96RY5 1269 aa20.68■□□□□ 0.9
ATG4B-201ENST00000344376 ISCA1Q9BUE6 129 aa20.68■□□□□ 0.9
ATG4B-201ENST00000344376 PHAXQ9H814 394 aaKnown RBP20.68■□□□□ 0.9
ATG4B-201ENST00000344376 FANCIQ9NVI1 1328 aa20.68■□□□□ 0.9
ATG4B-201ENST00000344376 FER1L6Q2WGJ9 1857 aa20.68■□□□□ 0.9
ATG4B-201ENST00000344376 CC2D2BQ6DHV5 1058 aa20.68■□□□□ 0.9
ATG4B-201ENST00000344376 ATP5J2-PTCD1G3V325 749 aa20.67■□□□□ 0.9
ATG4B-201ENST00000344376 KIF3CO14782 793 aa20.67■□□□□ 0.9
ATG4B-201ENST00000344376 NMRK2Q9NPI5 230 aa20.67■□□□□ 0.9
ATG4B-201ENST00000344376 FKBP4Q02790 459 aaKnown RBP eCLIP20.66■□□□□ 0.9
ATG4B-201ENST00000344376 TRIM28Q13263 835 aaKnown RBP20.66■□□□□ 0.9
ATG4B-201ENST00000344376 C3orf67Q6ZVT6 689 aa20.66■□□□□ 0.9
ATG4B-201ENST00000344376 TMX4Q9H1E5 349 aaPredicted RBP20.66■□□□□ 0.9
ATG4B-201ENST00000344376 PPEF1O14829 653 aaPredicted RBP20.65■□□□□ 0.9
ATG4B-201ENST00000344376 HCLS1P14317 486 aaPredicted RBP20.65■□□□□ 0.9
ATG4B-201ENST00000344376 MYH16Q9H6N6 1097 aa20.65■□□□□ 0.9
ATG4B-201ENST00000344376 TIAM2Q8IVF5 1701 aa20.65■□□□□ 0.9
ATG4B-201ENST00000344376 GLTPD2A6NH11 291 aa20.64■□□□□ 0.9
ATG4B-201ENST00000344376 GRIPAP1Q4V328 841 aa20.64■□□□□ 0.9
ATG4B-201ENST00000344376 DPY19L2Q6NUT2 758 aa20.64■□□□□ 0.9
ATG4B-201ENST00000344376 C16orf71Q8IYS4 520 aaPredicted RBP20.64■□□□□ 0.9
ATG4B-201ENST00000344376 OLFM4Q6UX06 510 aa20.63■□□□□ 0.89
ATG4B-201ENST00000344376 MYD88Q99836 296 aa20.63■□□□□ 0.89
ATG4B-201ENST00000344376 DDX46Q7L014 1031 aaKnown RBP20.63■□□□□ 0.89
ATG4B-201ENST00000344376 SYNE4Q8N205 404 aa20.63■□□□□ 0.89
ATG4B-201ENST00000344376 ZNF428Q96B54 188 aa20.63■□□□□ 0.89
ATG4B-201ENST00000344376 HSP90B1P14625 803 aaKnown RBP20.62■□□□□ 0.89
ATG4B-201ENST00000344376 FAM89AQ96GI7 184 aa20.62■□□□□ 0.89
ATG4B-201ENST00000344376 ABCC4O15439 1325 aa20.61■□□□□ 0.89
ATG4B-201ENST00000344376 TCERG1O14776 1098 aaKnown RBP20.61■□□□□ 0.89
ATG4B-201ENST00000344376 TOMM70O94826 608 aa20.61■□□□□ 0.89
ATG4B-201ENST00000344376 SLC4A2P04920 1241 aa20.61■□□□□ 0.89
ATG4B-201ENST00000344376 CCDC191Q8NCU4 936 aa20.61■□□□□ 0.89
ATG4B-201ENST00000344376 PSMD1Q99460 953 aa20.61■□□□□ 0.89
ATG4B-201ENST00000344376 METTL22Q9BUU2 404 aaPredicted RBP20.61■□□□□ 0.89
ATG4B-201ENST00000344376 RRAGCQ9HB90 399 aa20.61■□□□□ 0.89
ATG4B-201ENST00000344376 ZNF277Q9NRM2 450 aaPredicted RBP20.61■□□□□ 0.89
ATG4B-201ENST00000344376 EXOSC9Q06265 439 aaKnown RBP20.6■□□□□ 0.89
ATG4B-201ENST00000344376 KSR2Q6VAB6 950 aa20.6■□□□□ 0.89
ATG4B-201ENST00000344376 MAP3K2Q9Y2U5 619 aa20.6■□□□□ 0.89
ATG4B-201ENST00000344376 CCER2I3L3R5 266 aa20.59■□□□□ 0.89
ATG4B-201ENST00000344376 BBOX1O75936 387 aa20.59■□□□□ 0.89
ATG4B-201ENST00000344376 NEXNQ0ZGT2 675 aa20.59■□□□□ 0.89
ATG4B-201ENST00000344376 ZBTB38Q8NAP3 1195 aaPredicted RBP20.59■□□□□ 0.89
ATG4B-201ENST00000344376 CWC25Q9NXE8 425 aaPredicted RBP20.59■□□□□ 0.89
ATG4B-201ENST00000344376 CCDC88AQ3V6T2 1871 aa20.59■□□□□ 0.89
ATG4B-201ENST00000344376 IRS4O14654 1257 aaPredicted RBP20.59■□□□□ 0.89
ATG4B-201ENST00000344376 IARSP41252 1262 aaKnown RBP20.59■□□□□ 0.89
ATG4B-201ENST00000344376 RTL5Q5HYW3 569 aaPredicted RBP20.59■□□□□ 0.89
ATG4B-201ENST00000344376 ATP6V0A2Q9Y487 856 aa20.59■□□□□ 0.89
ATG4B-201ENST00000344376 DICER1Q9UPY3 1922 aaKnown RBP20.58■□□□□ 0.88
ATG4B-201ENST00000344376 PI4KAP2A4QPH2 592 aa20.58■□□□□ 0.88
ATG4B-201ENST00000344376 VAMP4O75379 141 aa20.58■□□□□ 0.88
ATG4B-201ENST00000344376 VEGFAP15692 232 aaPredicted RBP20.58■□□□□ 0.88
ATG4B-201ENST00000344376 GRAPQ13588 217 aa20.58■□□□□ 0.88
ATG4B-201ENST00000344376 PI4KAP1Q8N8J0 262 aa20.58■□□□□ 0.88
ATG4B-201ENST00000344376 GRAPLQ8TC17 118 aaPredicted RBP20.58■□□□□ 0.88
ATG4B-201ENST00000344376 SPINK5Q9NQ38 1064 aaPredicted RBP20.58■□□□□ 0.88
ATG4B-201ENST00000344376 SNED1Q8TER0 1413 aa20.57■□□□□ 0.88
ATG4B-201ENST00000344376 TMC4Q7Z404 712 aa20.57■□□□□ 0.88
ATG4B-201ENST00000344376 RBM46Q8TBY0 533 aaKnown RBP20.57■□□□□ 0.88
ATG4B-201ENST00000344376 JDP2Q8WYK2 163 aa20.57■□□□□ 0.88
ATG4B-201ENST00000344376 PCCAP05165 728 aaPredicted RBP20.56■□□□□ 0.88
ATG4B-201ENST00000344376 FLIIQ13045 1269 aa20.56■□□□□ 0.88
ATG4B-201ENST00000344376 SF3B3Q15393 1217 aaKnown RBP20.56■□□□□ 0.88
ATG4B-201ENST00000344376 LAMB2P55268 1798 aa20.56■□□□□ 0.88
ATG4B-201ENST00000344376 FKBP5Q13451 457 aaPredicted RBP20.55■□□□□ 0.88
ATG4B-201ENST00000344376 G2E3Q7L622 706 aa20.55■□□□□ 0.88
ATG4B-201ENST00000344376 SP8Q8IXZ3 490 aa20.55■□□□□ 0.88
ATG4B-201ENST00000344376 ZNF521Q96K83 1311 aa20.55■□□□□ 0.88
ATG4B-201ENST00000344376 DDX60Q8IY21 1712 aaKnown RBP20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms