RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 KIF1BPQ96EK5 621 aa17.5■□□□□ 0.39
CLCN1-201ENST00000343257 KIF20BQ96Q89 1820 aa17.5■□□□□ 0.39
CLCN1-201ENST00000343257 ERBB3P21860 1342 aa17.5■□□□□ 0.39
CLCN1-201ENST00000343257 NPHP3Q7Z494 1330 aa17.5■□□□□ 0.39
CLCN1-201ENST00000343257 WASLO00401 505 aaPredicted RBP17.5■□□□□ 0.39
CLCN1-201ENST00000343257 SSH3Q8TE77 659 aa17.5■□□□□ 0.39
CLCN1-201ENST00000343257 CDK12Q9NYV4 1490 aaPredicted RBP17.5■□□□□ 0.39
CLCN1-201ENST00000343257 CCZ1BP86790 482 aa17.49■□□□□ 0.39
CLCN1-201ENST00000343257 CCZ1P86791 482 aaPredicted RBP17.49■□□□□ 0.39
CLCN1-201ENST00000343257 NYAP1Q6ZVC0 841 aa17.49■□□□□ 0.39
CLCN1-201ENST00000343257 EPC1Q9H2F5 836 aa17.49■□□□□ 0.39
CLCN1-201ENST00000343257 TAOK2Q9UL54 1235 aa17.49■□□□□ 0.39
CLCN1-201ENST00000343257 PPP6R1Q9UPN7 881 aa17.49■□□□□ 0.39
CLCN1-201ENST00000343257 MAP3K19Q56UN5 1328 aa17.49■□□□□ 0.39
CLCN1-201ENST00000343257 H3BQV1 296 aa17.49■□□□□ 0.39
CLCN1-201ENST00000343257 CLCN6P51797 869 aa17.49■□□□□ 0.39
CLCN1-201ENST00000343257 ARHGAP29Q52LW3 1261 aa17.49■□□□□ 0.39
CLCN1-201ENST00000343257 IFFO2Q5TF58 517 aa17.49■□□□□ 0.39
CLCN1-201ENST00000343257 AOPEPQ8N6M6 819 aa17.49■□□□□ 0.39
CLCN1-201ENST00000343257 RUFY2Q8WXA3 655 aa17.49■□□□□ 0.39
CLCN1-201ENST00000343257 LRRC2Q9BYS8 371 aa17.49■□□□□ 0.39
CLCN1-201ENST00000343257 CRB1P82279 1406 aa17.49■□□□□ 0.39
CLCN1-201ENST00000343257 TTC21AQ8NDW8 1320 aa17.49■□□□□ 0.39
CLCN1-201ENST00000343257 SNW1Q13573 536 aaKnown RBP17.48■□□□□ 0.39
CLCN1-201ENST00000343257 IQCB1Q15051 598 aa17.48■□□□□ 0.39
CLCN1-201ENST00000343257 TMX1Q9H3N1 280 aa17.48■□□□□ 0.39
CLCN1-201ENST00000343257 ZCCHC17Q9NP64 241 aaKnown RBP17.48■□□□□ 0.39
CLCN1-201ENST00000343257 SEC31AO94979 1220 aaKnown RBP17.48■□□□□ 0.39
CLCN1-201ENST00000343257 HSP90B1P14625 803 aaKnown RBP17.48■□□□□ 0.39
CLCN1-201ENST00000343257 BLOC1S2Q6QNY1 142 aa17.48■□□□□ 0.39
CLCN1-201ENST00000343257 HOMER1Q86YM7 354 aa17.48■□□□□ 0.39
CLCN1-201ENST00000343257 FAM177A1Q8N128 213 aaPredicted RBP17.48■□□□□ 0.39
CLCN1-201ENST00000343257 BRF1Q92994 677 aa17.48■□□□□ 0.39
CLCN1-201ENST00000343257 SLC52A1Q9NWF4 448 aa17.48■□□□□ 0.39
CLCN1-201ENST00000343257 CPS1P31327 1500 aa17.48■□□□□ 0.39
CLCN1-201ENST00000343257 IFIT2P09913 472 aaKnown RBP17.47■□□□□ 0.39
CLCN1-201ENST00000343257 BMS1Q14692 1282 aaKnown RBP17.47■□□□□ 0.39
CLCN1-201ENST00000343257 ATP7BP35670 1465 aa17.47■□□□□ 0.39
CLCN1-201ENST00000343257 PDCP20941 246 aa17.47■□□□□ 0.39
CLCN1-201ENST00000343257 NMIQ13287 307 aaPredicted RBP17.47■□□□□ 0.39
CLCN1-201ENST00000343257 PTPN21Q16825 1174 aa17.47■□□□□ 0.39
CLCN1-201ENST00000343257 SMC2O95347 1197 aa17.46■□□□□ 0.39
CLCN1-201ENST00000343257 TAF7Q15545 349 aaPredicted RBP17.46■□□□□ 0.39
CLCN1-201ENST00000343257 CCAR1Q8IX12 1150 aaKnown RBP17.46■□□□□ 0.39
CLCN1-201ENST00000343257 LTV1Q96GA3 475 aaPredicted RBP17.46■□□□□ 0.39
CLCN1-201ENST00000343257 CCDC8Q9H0W5 538 aaPredicted RBP17.46■□□□□ 0.39
CLCN1-201ENST00000343257 AOX1Q06278 1338 aa17.46■□□□□ 0.39
CLCN1-201ENST00000343257 EDC4Q6P2E9 1401 aaKnown RBP17.46■□□□□ 0.39
CLCN1-201ENST00000343257 GUCY1B3Q02153 619 aa17.46■□□□□ 0.39
CLCN1-201ENST00000343257 NECTIN1Q15223 517 aa17.46■□□□□ 0.39
CLCN1-201ENST00000343257 HDGFL1Q5TGJ6 251 aa17.46■□□□□ 0.39
CLCN1-201ENST00000343257 ELP1O95163 1332 aa17.46■□□□□ 0.39
CLCN1-201ENST00000343257 SLC27A2O14975 620 aa17.46■□□□□ 0.39
CLCN1-201ENST00000343257 GLRX3O76003 335 aaKnown RBP17.46■□□□□ 0.39
CLCN1-201ENST00000343257 DNAJC2Q99543 621 aaKnown RBP17.46■□□□□ 0.39
CLCN1-201ENST00000343257 FHOD1Q9Y613 1164 aa17.46■□□□□ 0.39
CLCN1-201ENST00000343257 SIGLEC1Q9BZZ2 1709 aa17.46■□□□□ 0.38
CLCN1-201ENST00000343257 CCDC61Q9Y6R9 512 aa17.45■□□□□ 0.38
CLCN1-201ENST00000343257 TMC6Q7Z403 805 aa17.45■□□□□ 0.38
CLCN1-201ENST00000343257 CLASRPQ8N2M8 674 aaKnown RBP17.45■□□□□ 0.38
CLCN1-201ENST00000343257 PLA2G4AP47712 749 aa17.44■□□□□ 0.38
CLCN1-201ENST00000343257 GYS2P54840 703 aa17.44■□□□□ 0.38
CLCN1-201ENST00000343257 ISM2Q6H9L7 571 aa17.44■□□□□ 0.38
CLCN1-201ENST00000343257 AACSQ86V21 672 aa17.44■□□□□ 0.38
CLCN1-201ENST00000343257 BOLA2Q9H3K6 86 aa17.44■□□□□ 0.38
CLCN1-201ENST00000343257 GOLPH3LQ9H4A5 285 aa17.44■□□□□ 0.38
CLCN1-201ENST00000343257 ASXL2Q76L83 1435 aa17.44■□□□□ 0.38
CLCN1-201ENST00000343257 BIN1O00499 593 aa17.44■□□□□ 0.38
CLCN1-201ENST00000343257 PNMA6AP0CW24 399 aaPredicted RBP17.44■□□□□ 0.38
CLCN1-201ENST00000343257 CYP2C19P33261 490 aa17.44■□□□□ 0.38
CLCN1-201ENST00000343257 ST5P78524 1137 aa17.44■□□□□ 0.38
CLCN1-201ENST00000343257 AATKQ6ZMQ8 1374 aa17.44■□□□□ 0.38
CLCN1-201ENST00000343257 ABCA9Q8IUA7 1624 aa17.44■□□□□ 0.38
CLCN1-201ENST00000343257 CCDC34Q96HJ3 373 aa17.44■□□□□ 0.38
CLCN1-201ENST00000343257 SIL1Q9H173 461 aa17.44■□□□□ 0.38
CLCN1-201ENST00000343257 DNAI1Q9UI46 699 aa17.44■□□□□ 0.38
CLCN1-201ENST00000343257 STX1AQ16623 288 aa17.43■□□□□ 0.38
CLCN1-201ENST00000343257 EDC3Q96F86 508 aaKnown RBP17.43■□□□□ 0.38
CLCN1-201ENST00000343257 UHRF1BP1LA0JNW5 1464 aa17.43■□□□□ 0.38
CLCN1-201ENST00000343257 HTATSF1O43719 755 aaKnown RBP17.43■□□□□ 0.38
CLCN1-201ENST00000343257 TOB2Q14106 344 aaPredicted RBP17.43■□□□□ 0.38
CLCN1-201ENST00000343257 E4F1Q66K89 784 aaPredicted RBP17.43■□□□□ 0.38
CLCN1-201ENST00000343257 RBM43Q6ZSC3 357 aaKnown RBP17.43■□□□□ 0.38
CLCN1-201ENST00000343257 MRFAP1L1Q96HT8 127 aa17.43■□□□□ 0.38
CLCN1-201ENST00000343257 FAM53CQ9NYF3 392 aa17.43■□□□□ 0.38
CLCN1-201ENST00000343257 A0A0D9SFI3 127 aa17.42■□□□□ 0.38
CLCN1-201ENST00000343257 EPB41L2O43491 1005 aaKnown RBP17.42■□□□□ 0.38
CLCN1-201ENST00000343257 TNNT3P45378 269 aaPredicted RBP17.42■□□□□ 0.38
CLCN1-201ENST00000343257 RAD51AP2Q09MP3 1159 aa17.42■□□□□ 0.38
CLCN1-201ENST00000343257 DHX40Q8IX18 779 aaKnown RBP17.42■□□□□ 0.38
CLCN1-201ENST00000343257 ECHDC1Q9NTX5 307 aa17.42■□□□□ 0.38
CLCN1-201ENST00000343257 ARAP3Q8WWN8 1544 aa17.42■□□□□ 0.38
CLCN1-201ENST00000343257 PIK3C2BO00750 1634 aa17.42■□□□□ 0.38
CLCN1-201ENST00000343257 PI4KAP2A4QPH2 592 aa17.42■□□□□ 0.38
CLCN1-201ENST00000343257 GOLGA8FQ08AF8 430 aa17.42■□□□□ 0.38
CLCN1-201ENST00000343257 GOLGA8DPQ0D2H9 430 aa17.42■□□□□ 0.38
CLCN1-201ENST00000343257 PI4KAP1Q8N8J0 262 aa17.42■□□□□ 0.38
CLCN1-201ENST00000343257 PPP1R13BQ96KQ4 1090 aa17.42■□□□□ 0.38
CLCN1-201ENST00000343257 CCDC9Q9Y3X0 531 aaKnown RBP17.42■□□□□ 0.38
CLCN1-201ENST00000343257 NDUFB9Q9Y6M9 179 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms