RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 ADCK5Q3MIX3 580 aa14.53□□□□□ -0.08
SNRNP48-201ENST00000342415 RUFY3Q7L099 469 aa14.53□□□□□ -0.08
SNRNP48-201ENST00000342415 VPS37DQ86XT2 251 aa14.53□□□□□ -0.08
SNRNP48-201ENST00000342415 HSPA4P34932 840 aa14.53□□□□□ -0.08
SNRNP48-201ENST00000342415 ANKLE2Q86XL3 938 aa14.53□□□□□ -0.08
SNRNP48-201ENST00000342415 AOPEPQ8N6M6 819 aa14.53□□□□□ -0.08
SNRNP48-201ENST00000342415 CPLX3Q8WVH0 158 aa14.53□□□□□ -0.08
SNRNP48-201ENST00000342415 JAK2O60674 1132 aa14.53□□□□□ -0.08
SNRNP48-201ENST00000342415 APOBRQ0VD83 1088 aa14.53□□□□□ -0.08
SNRNP48-201ENST00000342415 BICC1Q9H694 974 aaKnown RBP14.53□□□□□ -0.08
SNRNP48-201ENST00000342415 GOLGA8BA8MQT2 603 aa14.52□□□□□ -0.08
SNRNP48-201ENST00000342415 MARCKSP29966 332 aaPredicted RBP14.52□□□□□ -0.08
SNRNP48-201ENST00000342415 CHRNA2Q15822 529 aa14.52□□□□□ -0.08
SNRNP48-201ENST00000342415 HYPKQ9NX55 129 aa14.52□□□□□ -0.08
SNRNP48-201ENST00000342415 LIG1P18858 919 aa14.52□□□□□ -0.08
SNRNP48-201ENST00000342415 NCOA5Q9HCD5 579 aaKnown RBP14.52□□□□□ -0.08
SNRNP48-201ENST00000342415 CCDC171Q6TFL3 1326 aa14.52□□□□□ -0.09
SNRNP48-201ENST00000342415 A0A087WWV3 80 aa14.52□□□□□ -0.09
SNRNP48-201ENST00000342415 ME3Q16798 604 aa14.52□□□□□ -0.09
SNRNP48-201ENST00000342415 IL17REQ8NFR9 667 aa14.52□□□□□ -0.09
SNRNP48-201ENST00000342415 RAD50Q92878 1312 aa14.52□□□□□ -0.09
SNRNP48-201ENST00000342415 LMOD1P29536 600 aaPredicted RBP14.52□□□□□ -0.09
SNRNP48-201ENST00000342415 OTUD7BQ6GQQ9 843 aa14.52□□□□□ -0.09
SNRNP48-201ENST00000342415 TOM1L2Q6ZVM7 507 aa14.52□□□□□ -0.09
SNRNP48-201ENST00000342415 USP16Q9Y5T5 823 aa14.52□□□□□ -0.09
SNRNP48-201ENST00000342415 ZMYM3Q14202 1370 aa14.51□□□□□ -0.09
SNRNP48-201ENST00000342415 ZNF853P0CG23 659 aa14.51□□□□□ -0.09
SNRNP48-201ENST00000342415 IMMTQ16891 758 aaKnown RBP14.51□□□□□ -0.09
SNRNP48-201ENST00000342415 VPS53Q5VIR6 699 aa14.51□□□□□ -0.09
SNRNP48-201ENST00000342415 LMBR1LQ6UX01 489 aa14.51□□□□□ -0.09
SNRNP48-201ENST00000342415 KSR2Q6VAB6 950 aa14.51□□□□□ -0.09
SNRNP48-201ENST00000342415 ANKRD13DQ6ZTN6 518 aa14.51□□□□□ -0.09
SNRNP48-201ENST00000342415 ORC3Q9UBD5 711 aaPredicted RBP14.51□□□□□ -0.09
SNRNP48-201ENST00000342415 TBC1D2BQ9UPU7 963 aa14.51□□□□□ -0.09
SNRNP48-201ENST00000342415 ZDHHC9Q9Y397 364 aa14.51□□□□□ -0.09
SNRNP48-201ENST00000342415 POGZQ7Z3K3 1410 aa14.51□□□□□ -0.09
SNRNP48-201ENST00000342415 SLC3A2P08195 630 aaKnown RBP14.51□□□□□ -0.09
SNRNP48-201ENST00000342415 GPS2Q13227 327 aa14.51□□□□□ -0.09
SNRNP48-201ENST00000342415 RAD21O60216 631 aa14.5□□□□□ -0.09
SNRNP48-201ENST00000342415 NCBP3Q53F19 620 aaKnown RBP14.5□□□□□ -0.09
SNRNP48-201ENST00000342415 MICU3Q86XE3 530 aa14.5□□□□□ -0.09
SNRNP48-201ENST00000342415 NPHP3Q7Z494 1330 aa14.5□□□□□ -0.09
SNRNP48-201ENST00000342415 FLT4P35916 1363 aa14.5□□□□□ -0.09
SNRNP48-201ENST00000342415 HOXC9P31274 260 aa14.5□□□□□ -0.09
SNRNP48-201ENST00000342415 JMYQ8N9B5 988 aa14.5□□□□□ -0.09
SNRNP48-201ENST00000342415 CCDC94Q9BW85 323 aaPredicted RBP14.5□□□□□ -0.09
SNRNP48-201ENST00000342415 ADCY10Q96PN6 1610 aa14.5□□□□□ -0.09
SNRNP48-201ENST00000342415 ZNF500O60304 480 aaPredicted RBP14.5□□□□□ -0.09
SNRNP48-201ENST00000342415 TIMM10P62072 90 aa14.5□□□□□ -0.09
SNRNP48-201ENST00000342415 STX1AQ16623 288 aa14.5□□□□□ -0.09
SNRNP48-201ENST00000342415 NFATC2IPQ8NCF5 419 aa14.5□□□□□ -0.09
SNRNP48-201ENST00000342415 ZFP91Q96JP5 570 aaPredicted RBP14.5□□□□□ -0.09
SNRNP48-201ENST00000342415 A0A1B0GVL5 298 aa14.49□□□□□ -0.09
SNRNP48-201ENST00000342415 RXRAP19793 462 aa14.49□□□□□ -0.09
SNRNP48-201ENST00000342415 ANKRD24Q8TF21 1146 aa14.49□□□□□ -0.09
SNRNP48-201ENST00000342415 TRPM2O94759 1503 aa14.49□□□□□ -0.09
SNRNP48-201ENST00000342415 MARCH6O60337 910 aa14.49□□□□□ -0.09
SNRNP48-201ENST00000342415 GPTP24298 496 aa14.49□□□□□ -0.09
SNRNP48-201ENST00000342415 IPO7O95373 1038 aaKnown RBP14.49□□□□□ -0.09
SNRNP48-201ENST00000342415 TFCP2Q12800 502 aa14.49□□□□□ -0.09
SNRNP48-201ENST00000342415 KCNH5Q8NCM2 988 aa14.49□□□□□ -0.09
SNRNP48-201ENST00000342415 CBX8Q9HC52 389 aa14.49□□□□□ -0.09
SNRNP48-201ENST00000342415 PRDM11Q9NQV5 511 aa14.49□□□□□ -0.09
SNRNP48-201ENST00000342415 SLC27A2O14975 620 aa14.48□□□□□ -0.09
SNRNP48-201ENST00000342415 LARGE1O95461 756 aa14.48□□□□□ -0.09
SNRNP48-201ENST00000342415 SNW1Q13573 536 aaKnown RBP14.48□□□□□ -0.09
SNRNP48-201ENST00000342415 MYRIPQ8NFW9 859 aa14.48□□□□□ -0.09
SNRNP48-201ENST00000342415 NOC3LQ8WTT2 800 aaKnown RBP14.48□□□□□ -0.09
SNRNP48-201ENST00000342415 AMOTQ4VCS5 1084 aa14.48□□□□□ -0.09
SNRNP48-201ENST00000342415 ANKRD20A12PQ8NF67 263 aa14.48□□□□□ -0.09
SNRNP48-201ENST00000342415 EDC4Q6P2E9 1401 aaKnown RBP14.48□□□□□ -0.09
SNRNP48-201ENST00000342415 CCDC66A2RUB6 948 aa14.48□□□□□ -0.09
SNRNP48-201ENST00000342415 METTL24Q5JXM2 366 aa14.48□□□□□ -0.09
SNRNP48-201ENST00000342415 LINS1Q8NG48 757 aa14.48□□□□□ -0.09
SNRNP48-201ENST00000342415 PYCARDQ9ULZ3 195 aa14.48□□□□□ -0.09
SNRNP48-201ENST00000342415 KLF18A0A0U1RQI7 1052 aa14.48□□□□□ -0.09
SNRNP48-201ENST00000342415 CCDC69A6NI79 296 aa14.48□□□□□ -0.09
SNRNP48-201ENST00000342415 HSP90B2PQ58FF3 399 aa14.48□□□□□ -0.09
SNRNP48-201ENST00000342415 TTC6Q86TZ1 520 aa14.48□□□□□ -0.09
SNRNP48-201ENST00000342415 NRBP1Q9UHY1 535 aa14.48□□□□□ -0.09
SNRNP48-201ENST00000342415 CTNNA3Q9UI47 895 aa14.48□□□□□ -0.09
SNRNP48-201ENST00000342415 SEC62Q99442 399 aaKnown RBP14.47□□□□□ -0.09
SNRNP48-201ENST00000342415 BCL2L12Q9HB09 334 aa14.47□□□□□ -0.09
SNRNP48-201ENST00000342415 DNAI1Q9UI46 699 aa14.47□□□□□ -0.09
SNRNP48-201ENST00000342415 TPCN1Q9ULQ1 816 aa14.47□□□□□ -0.09
SNRNP48-201ENST00000342415 ERCC6L2Q5T890 1561 aa14.47□□□□□ -0.09
SNRNP48-201ENST00000342415 TOP1P11387 765 aaKnown RBP14.47□□□□□ -0.09
SNRNP48-201ENST00000342415 ZNF213O14771 459 aa14.47□□□□□ -0.09
SNRNP48-201ENST00000342415 ABCF2Q9UG63 623 aa14.47□□□□□ -0.09
SNRNP48-201ENST00000342415 MTMR6Q9Y217 621 aa14.47□□□□□ -0.09
SNRNP48-201ENST00000342415 TTC41PQ6P2S7 1318 aa14.46□□□□□ -0.09
SNRNP48-201ENST00000342415 SART3Q15020 963 aaKnown RBP14.46□□□□□ -0.09
SNRNP48-201ENST00000342415 TMCO3Q6UWJ1 677 aa14.46□□□□□ -0.09
SNRNP48-201ENST00000342415 SUCLG2Q96I99 432 aa14.46□□□□□ -0.09
SNRNP48-201ENST00000342415 DBNDD2Q9BQY9 259 aa14.46□□□□□ -0.09
SNRNP48-201ENST00000342415 PTPDC1A2A3K4 754 aa14.46□□□□□ -0.09
SNRNP48-201ENST00000342415 TDO2P48775 406 aa14.46□□□□□ -0.09
SNRNP48-201ENST00000342415 NAP1L1P55209 391 aaKnown RBP14.46□□□□□ -0.09
SNRNP48-201ENST00000342415 PPFIBP1Q86W92 1011 aa14.46□□□□□ -0.09
SNRNP48-201ENST00000342415 MAP3K5Q99683 1374 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms