RNA–Protein interactions for RNA: ENST00000342075.8

PMS1-201, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 3,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-201ENST00000342075 NLRP10Q86W26 655 aa17.38■□□□□ 0.37
PMS1-201ENST00000342075 CCDC85AQ96PX6 553 aaPredicted RBP17.38■□□□□ 0.37
PMS1-201ENST00000342075 KLHDC4Q8TBB5 520 aa17.37■□□□□ 0.37
PMS1-201ENST00000342075 CHMP4BQ9H444 224 aaKnown RBP17.37■□□□□ 0.37
PMS1-201ENST00000342075 UTYO14607 1347 aa17.37■□□□□ 0.37
PMS1-201ENST00000342075 ANO8Q9HCE9 1232 aaPredicted RBP17.37■□□□□ 0.37
PMS1-201ENST00000342075 EXOC6BQ9Y2D4 811 aa17.37■□□□□ 0.37
PMS1-201ENST00000342075 ERVV-1B6SEH8 477 aa17.37■□□□□ 0.37
PMS1-201ENST00000342075 TBC1D9BQ66K14 1250 aa17.37■□□□□ 0.37
PMS1-201ENST00000342075 CCDC191Q8NCU4 936 aa17.37■□□□□ 0.37
PMS1-201ENST00000342075 NIP7Q9Y221 180 aaKnown RBP eCLIP17.37■□□□□ 0.37
PMS1-201ENST00000342075 SCN7AQ01118 1682 aa17.36■□□□□ 0.37
PMS1-201ENST00000342075 SRGAP3O43295 1099 aa17.36■□□□□ 0.37
PMS1-201ENST00000342075 SUSD4Q5VX71 490 aa17.36■□□□□ 0.37
PMS1-201ENST00000342075 CCDC24Q8N4L8 307 aa17.36■□□□□ 0.37
PMS1-201ENST00000342075 RGS3P49796 1198 aa17.36■□□□□ 0.37
PMS1-201ENST00000342075 NUTM1Q86Y26 1132 aa17.36■□□□□ 0.37
PMS1-201ENST00000342075 ZNF34Q8IZ26 560 aa17.36■□□□□ 0.37
PMS1-201ENST00000342075 CAMKK2Q96RR4 588 aa17.36■□□□□ 0.37
PMS1-201ENST00000342075 H7C1W4 665 aa17.35■□□□□ 0.37
PMS1-201ENST00000342075 TRAPPC3LQ5T215 181 aa17.35■□□□□ 0.37
PMS1-201ENST00000342075 PDZRN3Q9UPQ7 1066 aa17.35■□□□□ 0.37
PMS1-201ENST00000342075 PA2G4Q9UQ80 394 aaKnown RBP17.35■□□□□ 0.37
PMS1-201ENST00000342075 ATP8B2P98198 1209 aa17.35■□□□□ 0.37
PMS1-201ENST00000342075 TFCP2L1Q9NZI6 479 aa17.35■□□□□ 0.37
PMS1-201ENST00000342075 RFC4P35249 363 aa17.34■□□□□ 0.37
PMS1-201ENST00000342075 RPAP2Q8IXW5 612 aaPredicted RBP17.34■□□□□ 0.37
PMS1-201ENST00000342075 NARFQ9UHQ1 456 aa17.34■□□□□ 0.37
PMS1-201ENST00000342075 SMARCA5O60264 1052 aaPredicted RBP17.34■□□□□ 0.37
PMS1-201ENST00000342075 TRMT112Q9UI30 125 aaKnown RBP17.34■□□□□ 0.37
PMS1-201ENST00000342075 ZPR1O75312 459 aa17.34■□□□□ 0.37
PMS1-201ENST00000342075 AKT1S1Q96B36 256 aa17.33■□□□□ 0.37
PMS1-201ENST00000342075 USP42Q9H9J4 1324 aaKnown RBP17.33■□□□□ 0.36
PMS1-201ENST00000342075 SMC5Q8IY18 1101 aa17.33■□□□□ 0.36
PMS1-201ENST00000342075 LNPKQ9C0E8 428 aa17.33■□□□□ 0.36
PMS1-201ENST00000342075 CHMP3Q9Y3E7 222 aa17.33■□□□□ 0.36
PMS1-201ENST00000342075 FOXO4P98177 505 aa17.32■□□□□ 0.36
PMS1-201ENST00000342075 MSH5O43196 834 aa17.32■□□□□ 0.36
PMS1-201ENST00000342075 HCLS1P14317 486 aaPredicted RBP17.32■□□□□ 0.36
PMS1-201ENST00000342075 TRIM28Q13263 835 aaKnown RBP17.32■□□□□ 0.36
PMS1-201ENST00000342075 ANKRD45Q5TZF3 282 aa17.32■□□□□ 0.36
PMS1-201ENST00000342075 LMBR1LQ6UX01 489 aa17.32■□□□□ 0.36
PMS1-201ENST00000342075 PDGFDQ9GZP0 370 aaPredicted RBP17.32■□□□□ 0.36
PMS1-201ENST00000342075 ZBTB38Q8NAP3 1195 aaPredicted RBP17.31■□□□□ 0.36
PMS1-201ENST00000342075 UTRNP46939 3433 aa17.31■□□□□ 0.36
PMS1-201ENST00000342075 HSP90AB3PQ58FF7 597 aa17.31■□□□□ 0.36
PMS1-201ENST00000342075 SIL1Q9H173 461 aa17.31■□□□□ 0.36
PMS1-201ENST00000342075 PDE4AP27815 886 aa17.31■□□□□ 0.36
PMS1-201ENST00000342075 COL23A1Q86Y22 540 aaPredicted RBP17.31■□□□□ 0.36
PMS1-201ENST00000342075 SSH3Q8TE77 659 aa17.31■□□□□ 0.36
PMS1-201ENST00000342075 DCTPP1Q9H773 170 aa17.31■□□□□ 0.36
PMS1-201ENST00000342075 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.31■□□□□ 0.36
PMS1-201ENST00000342075 POLA2Q14181 598 aa17.3■□□□□ 0.36
PMS1-201ENST00000342075 NTSR2O95665 410 aa17.3■□□□□ 0.36
PMS1-201ENST00000342075 PCCAP05165 728 aaPredicted RBP17.3■□□□□ 0.36
PMS1-201ENST00000342075 SF3B2Q13435 895 aaKnown RBP17.3■□□□□ 0.36
PMS1-201ENST00000342075 C16orf71Q8IYS4 520 aaPredicted RBP17.3■□□□□ 0.36
PMS1-201ENST00000342075 RGPD3A6NKT7 1758 aaPredicted RBP17.3■□□□□ 0.36
PMS1-201ENST00000342075 RGPD4Q7Z3J3 1758 aa17.3■□□□□ 0.36
PMS1-201ENST00000342075 GYS1P13807 737 aa17.29■□□□□ 0.36
PMS1-201ENST00000342075 IRS4O14654 1257 aaPredicted RBP17.29■□□□□ 0.36
PMS1-201ENST00000342075 OTUD7AQ8TE49 926 aaPredicted RBP17.29■□□□□ 0.36
PMS1-201ENST00000342075 ZNF594Q96JF6 807 aaPredicted RBP17.29■□□□□ 0.36
PMS1-201ENST00000342075 ZNF652Q9Y2D9 606 aa17.29■□□□□ 0.36
PMS1-201ENST00000342075 PNPLA7Q6ZV29 1317 aa17.29■□□□□ 0.36
PMS1-201ENST00000342075 SURF6O75683 361 aaKnown RBP17.29■□□□□ 0.36
PMS1-201ENST00000342075 MSL1Q68DK7 614 aa17.29■□□□□ 0.36
PMS1-201ENST00000342075 C3orf67Q6ZVT6 689 aa17.29■□□□□ 0.36
PMS1-201ENST00000342075 SSFA2P28290 1259 aa17.28■□□□□ 0.36
PMS1-201ENST00000342075 FAM161AQ3B820 660 aa17.28■□□□□ 0.36
PMS1-201ENST00000342075 ERFEQ4G0M1 354 aa17.28■□□□□ 0.36
PMS1-201ENST00000342075 DDX60Q8IY21 1712 aaKnown RBP17.28■□□□□ 0.36
PMS1-201ENST00000342075 MTX1Q13505 466 aa17.28■□□□□ 0.36
PMS1-201ENST00000342075 NFIXQ14938 502 aa17.28■□□□□ 0.36
PMS1-201ENST00000342075 CLEC4GQ6UXB4 293 aa17.28■□□□□ 0.36
PMS1-201ENST00000342075 UTP14AQ9BVJ6 771 aaKnown RBP17.28■□□□□ 0.36
PMS1-201ENST00000342075 HMMRO75330 724 aa17.27■□□□□ 0.36
PMS1-201ENST00000342075 BAG6P46379 1132 aa17.27■□□□□ 0.36
PMS1-201ENST00000342075 NUCB1Q02818 461 aa17.27■□□□□ 0.36
PMS1-201ENST00000342075 IL1RAPL2Q9NP60 686 aa17.27■□□□□ 0.36
PMS1-201ENST00000342075 ABCC12Q96J65 1359 aa17.27■□□□□ 0.36
PMS1-201ENST00000342075 COL4A1P02462 1669 aa17.27■□□□□ 0.36
PMS1-201ENST00000342075 TAF1P21675 1872 aa17.27■□□□□ 0.35
PMS1-201ENST00000342075 RABL6Q3YEC7 729 aaPredicted RBP17.27■□□□□ 0.35
PMS1-201ENST00000342075 MYH3P11055 1940 aa17.27■□□□□ 0.35
PMS1-201ENST00000342075 CHD1LQ86WJ1 897 aa17.26■□□□□ 0.35
PMS1-201ENST00000342075 GCC1Q96CN9 775 aa17.26■□□□□ 0.35
PMS1-201ENST00000342075 CASZ1Q86V15 1759 aa17.26■□□□□ 0.35
PMS1-201ENST00000342075 RFX5P48382 616 aaPredicted RBP17.26■□□□□ 0.35
PMS1-201ENST00000342075 SETDB2Q96T68 719 aa17.26■□□□□ 0.35
PMS1-201ENST00000342075 SH3TC1Q8TE82 1336 aa17.26■□□□□ 0.35
PMS1-201ENST00000342075 GREM2Q9H772 168 aa17.26■□□□□ 0.35
PMS1-201ENST00000342075 IBTKQ9P2D0 1353 aaPredicted RBP17.26■□□□□ 0.35
PMS1-201ENST00000342075 ADRA2BP18089 450 aa17.25■□□□□ 0.35
PMS1-201ENST00000342075 TSHZ3Q63HK5 1081 aa17.25■□□□□ 0.35
PMS1-201ENST00000342075 COL24A1Q17RW2 1714 aa17.25■□□□□ 0.35
PMS1-201ENST00000342075 PTPN12Q05209 780 aaKnown RBP17.24■□□□□ 0.35
PMS1-201ENST00000342075 SLC15A2Q16348 729 aa17.24■□□□□ 0.35
PMS1-201ENST00000342075 NBPF5PQ86XG9 351 aaPredicted RBP17.24■□□□□ 0.35
PMS1-201ENST00000342075 PARP10Q53GL7 1025 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms