RNA–Protein interactions for RNA: ENST00000341772.4

DNER-201, Transcript of delta/notch like EGF repeat containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNER, Length 3,260 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNER-201ENST00000341772 NBPF6Q5VWK0 638 aa17.04■□□□□ 0.32
DNER-201ENST00000341772 ZNF589Q86UQ0 364 aaPredicted RBP17.04■□□□□ 0.32
DNER-201ENST00000341772 SSH3Q8TE77 659 aa17.04■□□□□ 0.32
DNER-201ENST00000341772 NBPF4Q96M43 638 aa17.04■□□□□ 0.32
DNER-201ENST00000341772 HOXC9P31274 260 aa17.03■□□□□ 0.32
DNER-201ENST00000341772 SF3A1Q15459 793 aaKnown RBP17.03■□□□□ 0.32
DNER-201ENST00000341772 BICC1Q9H694 974 aaKnown RBP17.03■□□□□ 0.32
DNER-201ENST00000341772 SDF4Q9BRK5 362 aa17.03■□□□□ 0.32
DNER-201ENST00000341772 HAND2P61296 217 aa17.02■□□□□ 0.32
DNER-201ENST00000341772 ARHGEF28Q8N1W1 1705 aaKnown RBP17.02■□□□□ 0.31
DNER-201ENST00000341772 POLR3DP05423 398 aaPredicted RBP17.02■□□□□ 0.31
DNER-201ENST00000341772 SNRKQ9NRH2 765 aa17.02■□□□□ 0.31
DNER-201ENST00000341772 CSB-PGBD3P0DP91 1061 aa17.01■□□□□ 0.31
DNER-201ENST00000341772 MYD88Q99836 296 aa17.01■□□□□ 0.31
DNER-201ENST00000341772 KIAA0232Q92628 1395 aa17.01■□□□□ 0.31
DNER-201ENST00000341772 CCDC112Q8NEF3 446 aa17.01■□□□□ 0.31
DNER-201ENST00000341772 FAM200AQ8TCP9 573 aa17.01■□□□□ 0.31
DNER-201ENST00000341772 PPLO60437 1756 aa17.01■□□□□ 0.31
DNER-201ENST00000341772 SLC27A2O14975 620 aa17.01■□□□□ 0.31
DNER-201ENST00000341772 LETM1O95202 739 aaPredicted RBP17.01■□□□□ 0.31
DNER-201ENST00000341772 SMC2O95347 1197 aa17.01■□□□□ 0.31
DNER-201ENST00000341772 SUCLG2Q96I99 432 aa17.01■□□□□ 0.31
DNER-201ENST00000341772 STAP2Q9UGK3 403 aa17.01■□□□□ 0.31
DNER-201ENST00000341772 ALKQ9UM73 1620 aa17.01■□□□□ 0.31
DNER-201ENST00000341772 CCDC171Q6TFL3 1326 aa17■□□□□ 0.31
DNER-201ENST00000341772 RNF20Q5VTR2 975 aa17■□□□□ 0.31
DNER-201ENST00000341772 FRMPD1Q5SYB0 1578 aa17■□□□□ 0.31
DNER-201ENST00000341772 HSP90AB4PQ58FF6 505 aa17■□□□□ 0.31
DNER-201ENST00000341772 TTC14Q96N46 770 aa17■□□□□ 0.31
DNER-201ENST00000341772 CGNQ9P2M7 1197 aaKnown RBP17■□□□□ 0.31
DNER-201ENST00000341772 Q6ZUG5 572 aa16.99■□□□□ 0.31
DNER-201ENST00000341772 MRVI1Q9Y6F6 885 aa16.99■□□□□ 0.31
DNER-201ENST00000341772 BEND3Q5T5X7 828 aa16.99■□□□□ 0.31
DNER-201ENST00000341772 CRB1P82279 1406 aa16.99■□□□□ 0.31
DNER-201ENST00000341772 KNDC1Q76NI1 1749 aa16.99■□□□□ 0.31
DNER-201ENST00000341772 UBE3BQ7Z3V4 1068 aa16.99■□□□□ 0.31
DNER-201ENST00000341772 KIAA1524Q8TCG1 905 aa16.99■□□□□ 0.31
DNER-201ENST00000341772 NLRP2Q9NX02 1062 aa16.99■□□□□ 0.31
DNER-201ENST00000341772 MLH3Q9UHC1 1453 aa16.98■□□□□ 0.31
DNER-201ENST00000341772 PIK3C2BO00750 1634 aa16.98■□□□□ 0.31
DNER-201ENST00000341772 APOBRQ0VD83 1088 aa16.98■□□□□ 0.31
DNER-201ENST00000341772 UVSSAQ2YD98 709 aa16.98■□□□□ 0.31
DNER-201ENST00000341772 CCAR2Q8N163 923 aaKnown RBP16.98■□□□□ 0.31
DNER-201ENST00000341772 PRIMPOLQ96LW4 560 aa16.98■□□□□ 0.31
DNER-201ENST00000341772 SALL3Q9BXA9 1300 aa16.98■□□□□ 0.31
DNER-201ENST00000341772 TCHHQ07283 1943 aa16.98■□□□□ 0.31
DNER-201ENST00000341772 CDK12Q9NYV4 1490 aaPredicted RBP16.97■□□□□ 0.31
DNER-201ENST00000341772 FLT4P35916 1363 aa16.97■□□□□ 0.31
DNER-201ENST00000341772 PSMA5P28066 241 aa16.97■□□□□ 0.31
DNER-201ENST00000341772 ST3GAL1Q11201 340 aa16.97■□□□□ 0.31
DNER-201ENST00000341772 MTERF4Q7Z6M4 381 aaKnown RBP16.97■□□□□ 0.31
DNER-201ENST00000341772 GJB4Q9NTQ9 266 aa16.97■□□□□ 0.31
DNER-201ENST00000341772 USP27XA6NNY8 438 aa16.97■□□□□ 0.31
DNER-201ENST00000341772 ATP2B1P20020 1258 aa16.97■□□□□ 0.31
DNER-201ENST00000341772 EIF4A1P60842 406 aaKnown RBP16.97■□□□□ 0.31
DNER-201ENST00000341772 HOMER1Q86YM7 354 aa16.97■□□□□ 0.31
DNER-201ENST00000341772 LEO1Q8WVC0 666 aaPredicted RBP16.97■□□□□ 0.31
DNER-201ENST00000341772 CREBRFQ8IUR6 639 aa16.97■□□□□ 0.31
DNER-201ENST00000341772 CACTINQ8WUQ7 758 aaKnown RBP16.97■□□□□ 0.31
DNER-201ENST00000341772 EVI5LQ96CN4 794 aa16.97■□□□□ 0.31
DNER-201ENST00000341772 AATKQ6ZMQ8 1374 aa16.96■□□□□ 0.31
DNER-201ENST00000341772 FKBP4Q02790 459 aaKnown RBP eCLIP16.96■□□□□ 0.31
DNER-201ENST00000341772 CCDC144BQ3MJ40 725 aa16.96■□□□□ 0.31
DNER-201ENST00000341772 VPS53Q5VIR6 699 aa16.96■□□□□ 0.31
DNER-201ENST00000341772 CCDC73Q6ZRK6 1079 aa16.96■□□□□ 0.31
DNER-201ENST00000341772 CCDC144CPQ8IYA2 1237 aa16.96■□□□□ 0.31
DNER-201ENST00000341772 ABCA9Q8IUA7 1624 aa16.96■□□□□ 0.31
DNER-201ENST00000341772 A0A0G2JLW4 131 aa16.96■□□□□ 0.31
DNER-201ENST00000341772 GOLIM4O00461 696 aa16.96■□□□□ 0.31
DNER-201ENST00000341772 KCNA6P17658 529 aa16.96■□□□□ 0.31
DNER-201ENST00000341772 NEXNQ0ZGT2 675 aa16.96■□□□□ 0.31
DNER-201ENST00000341772 CCAR1Q8IX12 1150 aaKnown RBP16.96■□□□□ 0.31
DNER-201ENST00000341772 KINO60870 393 aaKnown RBP16.95■□□□□ 0.3
DNER-201ENST00000341772 CHMP4CQ96CF2 233 aa16.95■□□□□ 0.3
DNER-201ENST00000341772 ZSCAN31Q96LW9 406 aaPredicted RBP16.95■□□□□ 0.3
DNER-201ENST00000341772 PPP6R1Q9UPN7 881 aa16.95■□□□□ 0.3
DNER-201ENST00000341772 CPSF1Q10570 1443 aaKnown RBP16.95■□□□□ 0.3
DNER-201ENST00000341772 KIF24Q5T7B8 1368 aa16.95■□□□□ 0.3
DNER-201ENST00000341772 WASHC4Q2M389 1173 aa16.95■□□□□ 0.3
DNER-201ENST00000341772 GPHNQ9NQX3 736 aaPredicted RBP16.95■□□□□ 0.3
DNER-201ENST00000341772 PRDM4Q9UKN5 801 aa16.95■□□□□ 0.3
DNER-201ENST00000341772 A0A1B0GVL5 298 aa16.95■□□□□ 0.3
DNER-201ENST00000341772 PDCP20941 246 aa16.95■□□□□ 0.3
DNER-201ENST00000341772 TIMM10P62072 90 aa16.95■□□□□ 0.3
DNER-201ENST00000341772 COPS6Q7L5N1 327 aa16.95■□□□□ 0.3
DNER-201ENST00000341772 SH2B1Q9NRF2 756 aaPredicted RBP16.95■□□□□ 0.3
DNER-201ENST00000341772 DBF4Q9UBU7 674 aaPredicted RBP16.95■□□□□ 0.3
DNER-201ENST00000341772 SIGLEC1Q9BZZ2 1709 aa16.95■□□□□ 0.3
DNER-201ENST00000341772 MAP3K5Q99683 1374 aa16.95■□□□□ 0.3
DNER-201ENST00000341772 SASH1O94885 1247 aa16.94■□□□□ 0.3
DNER-201ENST00000341772 SKILP12757 684 aa16.94■□□□□ 0.3
DNER-201ENST00000341772 RXRAP19793 462 aa16.94■□□□□ 0.3
DNER-201ENST00000341772 TFCP2Q12800 502 aa16.94■□□□□ 0.3
DNER-201ENST00000341772 C11orf57Q6ZUT1 292 aaPredicted RBP16.94■□□□□ 0.3
DNER-201ENST00000341772 AOPEPQ8N6M6 819 aa16.94■□□□□ 0.3
DNER-201ENST00000341772 ZFP91Q96JP5 570 aaPredicted RBP16.94■□□□□ 0.3
DNER-201ENST00000341772 TERF1P54274 439 aa16.94■□□□□ 0.3
DNER-201ENST00000341772 GRM8O00222 908 aa16.94■□□□□ 0.3
DNER-201ENST00000341772 GNL2Q13823 731 aaKnown RBP16.94■□□□□ 0.3
DNER-201ENST00000341772 XAGE3Q8WTP9 111 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms