RNA–Protein interactions for RNA: ENST00000340840.6

TRERF1-201, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-201ENST00000340840 USP6P35125 1406 aa11.13□□□□□ -0.63
TRERF1-201ENST00000340840 HOXB7P09629 217 aa11.13□□□□□ -0.63
TRERF1-201ENST00000340840 CREB3L3Q68CJ9 461 aa11.13□□□□□ -0.63
TRERF1-201ENST00000340840 CCDC186Q7Z3E2 898 aa11.13□□□□□ -0.63
TRERF1-201ENST00000340840 CPS1P31327 1500 aa11.13□□□□□ -0.63
TRERF1-201ENST00000340840 NBPF7P0C2Y1 421 aaPredicted RBP11.13□□□□□ -0.63
TRERF1-201ENST00000340840 C16orf45Q96MC5 204 aaPredicted RBP11.13□□□□□ -0.63
TRERF1-201ENST00000340840 C19orf44Q9H6X5 657 aa11.13□□□□□ -0.63
TRERF1-201ENST00000340840 TNNT1P13805 278 aa11.12□□□□□ -0.63
TRERF1-201ENST00000340840 HOXC9P31274 260 aa11.12□□□□□ -0.63
TRERF1-201ENST00000340840 ANO6Q4KMQ2 910 aa11.12□□□□□ -0.63
TRERF1-201ENST00000340840 ZNF396Q96N95 335 aaPredicted RBP11.12□□□□□ -0.63
TRERF1-201ENST00000340840 CLIP2Q9UDT6 1046 aa11.12□□□□□ -0.63
TRERF1-201ENST00000340840 MAP3K2Q9Y2U5 619 aa11.12□□□□□ -0.63
TRERF1-201ENST00000340840 LTKP29376 864 aa11.12□□□□□ -0.63
TRERF1-201ENST00000340840 CEBPZQ03701 1054 aaKnown RBP11.12□□□□□ -0.63
TRERF1-201ENST00000340840 IL17REQ8NFR9 667 aa11.12□□□□□ -0.63
TRERF1-201ENST00000340840 SDF4Q9BRK5 362 aa11.12□□□□□ -0.63
TRERF1-201ENST00000340840 CLTCQ00610 1675 aaKnown RBP11.12□□□□□ -0.63
TRERF1-201ENST00000340840 PTGS1P23219 599 aa11.12□□□□□ -0.63
TRERF1-201ENST00000340840 FOSBP53539 338 aa11.12□□□□□ -0.63
TRERF1-201ENST00000340840 SYTL4Q96C24 671 aaPredicted RBP11.12□□□□□ -0.63
TRERF1-201ENST00000340840 HYPKQ9NX55 129 aa11.12□□□□□ -0.63
TRERF1-201ENST00000340840 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.11□□□□□ -0.63
TRERF1-201ENST00000340840 PREX1Q8TCU6 1659 aa11.11□□□□□ -0.63
TRERF1-201ENST00000340840 PI4K2BQ8TCG2 481 aa11.11□□□□□ -0.63
TRERF1-201ENST00000340840 CTAGE5O15320 804 aa11.11□□□□□ -0.63
TRERF1-201ENST00000340840 NEMFO60524 1076 aa11.11□□□□□ -0.63
TRERF1-201ENST00000340840 ZC3H6P61129 1189 aaKnown RBP11.11□□□□□ -0.63
TRERF1-201ENST00000340840 NMIQ13287 307 aaPredicted RBP11.11□□□□□ -0.63
TRERF1-201ENST00000340840 TCEANC2Q96MN5 208 aa11.11□□□□□ -0.63
TRERF1-201ENST00000340840 ZSWIM6Q9HCJ5 1215 aa11.11□□□□□ -0.63
TRERF1-201ENST00000340840 LUZP1Q86V48 1076 aa11.1□□□□□ -0.63
TRERF1-201ENST00000340840 DDX11Q96FC9 970 aa11.1□□□□□ -0.63
TRERF1-201ENST00000340840 DNAJC2Q99543 621 aaKnown RBP11.1□□□□□ -0.63
TRERF1-201ENST00000340840 PA2G4Q9UQ80 394 aaKnown RBP11.1□□□□□ -0.63
TRERF1-201ENST00000340840 ROBO2Q9HCK4 1378 aa11.1□□□□□ -0.63
TRERF1-201ENST00000340840 SALL3Q9BXA9 1300 aa11.1□□□□□ -0.63
TRERF1-201ENST00000340840 POLA2Q14181 598 aa11.1□□□□□ -0.63
TRERF1-201ENST00000340840 CEP57L1Q8IYX8 460 aa11.1□□□□□ -0.63
TRERF1-201ENST00000340840 TSC1Q92574 1164 aa11.1□□□□□ -0.63
TRERF1-201ENST00000340840 TTC14Q96N46 770 aa11.1□□□□□ -0.63
TRERF1-201ENST00000340840 PAXBP1Q9Y5B6 917 aa11.1□□□□□ -0.63
TRERF1-201ENST00000340840 RIOK3O14730 519 aaKnown RBP11.1□□□□□ -0.63
TRERF1-201ENST00000340840 AMOTQ4VCS5 1084 aa11.1□□□□□ -0.63
TRERF1-201ENST00000340840 KSR2Q6VAB6 950 aa11.1□□□□□ -0.63
TRERF1-201ENST00000340840 MPRIPQ6WCQ1 1025 aa11.1□□□□□ -0.63
TRERF1-201ENST00000340840 TMEM2Q9UHN6 1383 aa11.1□□□□□ -0.63
TRERF1-201ENST00000340840 PTH1RQ03431 593 aa11.09□□□□□ -0.63
TRERF1-201ENST00000340840 GNL2Q13823 731 aaKnown RBP11.09□□□□□ -0.63
TRERF1-201ENST00000340840 FILIP1Q7Z7B0 1213 aa11.09□□□□□ -0.63
TRERF1-201ENST00000340840 SIGLEC1Q9BZZ2 1709 aa11.09□□□□□ -0.63
TRERF1-201ENST00000340840 FAM177BA6PVY3 158 aa11.09□□□□□ -0.63
TRERF1-201ENST00000340840 ME1P48163 572 aa11.09□□□□□ -0.63
TRERF1-201ENST00000340840 ME3Q16798 604 aa11.09□□□□□ -0.63
TRERF1-201ENST00000340840 KIAA1524Q8TCG1 905 aa11.09□□□□□ -0.63
TRERF1-201ENST00000340840 ZSCAN16Q9H4T2 348 aaPredicted RBP11.09□□□□□ -0.63
TRERF1-201ENST00000340840 BCL2L12Q9HB09 334 aa11.09□□□□□ -0.63
TRERF1-201ENST00000340840 NLRP2Q9NX02 1062 aa11.09□□□□□ -0.63
TRERF1-201ENST00000340840 LRRFIP1Q32MZ4 808 aaKnown RBP11.09□□□□□ -0.63
TRERF1-201ENST00000340840 GORABQ5T7V8 394 aa11.09□□□□□ -0.63
TRERF1-201ENST00000340840 LARP1Q6PKG0 1096 aaKnown RBP11.09□□□□□ -0.63
TRERF1-201ENST00000340840 CGNQ9P2M7 1197 aaKnown RBP11.09□□□□□ -0.63
TRERF1-201ENST00000340840 ZHX1Q9UKY1 873 aaPredicted RBP11.09□□□□□ -0.63
TRERF1-201ENST00000340840 TAOK2Q9UL54 1235 aa11.09□□□□□ -0.63
TRERF1-201ENST00000340840 U3KPZ7 1027 aaPredicted RBP11.09□□□□□ -0.63
TRERF1-201ENST00000340840 GRM8O00222 908 aa11.09□□□□□ -0.63
TRERF1-201ENST00000340840 PTPN14Q15678 1187 aa11.09□□□□□ -0.63
TRERF1-201ENST00000340840 KCNH5Q8NCM2 988 aa11.09□□□□□ -0.63
TRERF1-201ENST00000340840 LINS1Q8NG48 757 aa11.09□□□□□ -0.63
TRERF1-201ENST00000340840 FBXW7Q969H0 707 aa11.09□□□□□ -0.63
TRERF1-201ENST00000340840 GTPBP4Q9BZE4 634 aaKnown RBP11.09□□□□□ -0.63
TRERF1-201ENST00000340840 ANO10Q9NW15 660 aa11.09□□□□□ -0.63
TRERF1-201ENST00000340840 SPDYE4A6NLX3 237 aa11.08□□□□□ -0.64
TRERF1-201ENST00000340840 SLC27A2O14975 620 aa11.08□□□□□ -0.64
TRERF1-201ENST00000340840 BEND3Q5T5X7 828 aa11.08□□□□□ -0.64
TRERF1-201ENST00000340840 FAM173BQ6P4H8 233 aa11.08□□□□□ -0.64
TRERF1-201ENST00000340840 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.08□□□□□ -0.64
TRERF1-201ENST00000340840 TTC6Q86TZ1 520 aa11.08□□□□□ -0.64
TRERF1-201ENST00000340840 NEK1Q96PY6 1258 aa11.08□□□□□ -0.64
TRERF1-201ENST00000340840 DNAJC25Q9H1X3 360 aa11.08□□□□□ -0.64
TRERF1-201ENST00000340840 SLAIN2Q9P270 581 aa11.08□□□□□ -0.64
TRERF1-201ENST00000340840 PHF8Q9UPP1 1060 aa11.08□□□□□ -0.64
TRERF1-201ENST00000340840 SMTNL1A8MU46 457 aa11.08□□□□□ -0.64
TRERF1-201ENST00000340840 EIF4A1P60842 406 aaKnown RBP11.08□□□□□ -0.64
TRERF1-201ENST00000340840 STX1AQ16623 288 aa11.08□□□□□ -0.64
TRERF1-201ENST00000340840 CDC37L1Q7L3B6 337 aa11.08□□□□□ -0.64
TRERF1-201ENST00000340840 TTC5Q8N0Z6 440 aa11.08□□□□□ -0.64
TRERF1-201ENST00000340840 RPAP1Q9BWH6 1393 aaPredicted RBP11.08□□□□□ -0.64
TRERF1-201ENST00000340840 OVOS2A0A0J9YW53 1432 aa11.08□□□□□ -0.64
TRERF1-201ENST00000340840 OVOS2Q6IE36 1432 aa11.08□□□□□ -0.64
TRERF1-201ENST00000340840 KIF2AO00139 706 aaPredicted RBP11.08□□□□□ -0.64
TRERF1-201ENST00000340840 DTNBO60941 627 aa11.08□□□□□ -0.64
TRERF1-201ENST00000340840 DHX8Q14562 1220 aaKnown RBP11.08□□□□□ -0.64
TRERF1-201ENST00000340840 CBX8Q9HC52 389 aa11.08□□□□□ -0.64
TRERF1-201ENST00000340840 SPTLC3Q9NUV7 552 aa11.08□□□□□ -0.64
TRERF1-201ENST00000340840 USP31Q70CQ4 1352 aa11.08□□□□□ -0.64
TRERF1-201ENST00000340840 LARGE1O95461 756 aa11.07□□□□□ -0.64
TRERF1-201ENST00000340840 ADCK5Q3MIX3 580 aa11.07□□□□□ -0.64
TRERF1-201ENST00000340840 HOMER1Q86YM7 354 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms