RNA–Protein interactions for RNA: ENST00000340623.4

C2orf88-201, Transcript of chromosome 2 open reading frame 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C2orf88, Length 4,035 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-201ENST00000340623 STK32BQ9NY57 414 aa14.25□□□□□ -0.13
C2orf88-201ENST00000340623 BRPF1P55201 1214 aaPredicted RBP14.24□□□□□ -0.13
C2orf88-201ENST00000340623 CDC5LQ99459 802 aaKnown RBP14.24□□□□□ -0.13
C2orf88-201ENST00000340623 WWC3Q9ULE0 1092 aa14.24□□□□□ -0.13
C2orf88-201ENST00000340623 MAP3K15Q6ZN16 1313 aa14.24□□□□□ -0.13
C2orf88-201ENST00000340623 ANKRD26Q9UPS8 1709 aa14.24□□□□□ -0.13
C2orf88-201ENST00000340623 MED1Q15648 1581 aaPredicted RBP14.24□□□□□ -0.13
C2orf88-201ENST00000340623 USPL1Q5W0Q7 1092 aa14.24□□□□□ -0.13
C2orf88-201ENST00000340623 DCTPP1Q9H773 170 aa14.24□□□□□ -0.13
C2orf88-201ENST00000340623 ST5P78524 1137 aa14.23□□□□□ -0.13
C2orf88-201ENST00000340623 NKX1-1Q15270 411 aaPredicted RBP14.23□□□□□ -0.13
C2orf88-201ENST00000340623 SMIM5Q71RC9 77 aa14.23□□□□□ -0.13
C2orf88-201ENST00000340623 FNBP4Q8N3X1 1017 aaPredicted RBP14.23□□□□□ -0.13
C2orf88-201ENST00000340623 ANKIB1Q9P2G1 1089 aa14.23□□□□□ -0.13
C2orf88-201ENST00000340623 ROBO1Q9Y6N7 1651 aa14.23□□□□□ -0.13
C2orf88-201ENST00000340623 HELBQ8NG08 1087 aaPredicted RBP14.23□□□□□ -0.13
C2orf88-201ENST00000340623 STRCQ7RTU9 1775 aa14.23□□□□□ -0.13
C2orf88-201ENST00000340623 TOPAZ1Q8N9V7 1692 aa14.23□□□□□ -0.13
C2orf88-201ENST00000340623 NUCB1Q02818 461 aa14.23□□□□□ -0.13
C2orf88-201ENST00000340623 PARP10Q53GL7 1025 aa14.23□□□□□ -0.13
C2orf88-201ENST00000340623 NBPF14Q5TI25 921 aa14.23□□□□□ -0.13
C2orf88-201ENST00000340623 ZNF622Q969S3 477 aaKnown RBP eCLIP14.23□□□□□ -0.13
C2orf88-201ENST00000340623 NBPF26B4DH59 902 aa14.22□□□□□ -0.13
C2orf88-201ENST00000340623 NBPF10Q6P3W6 841 aaKnown RBP14.22□□□□□ -0.13
C2orf88-201ENST00000340623 NBPF15Q8N660 670 aa14.22□□□□□ -0.13
C2orf88-201ENST00000340623 ZNF594Q96JF6 807 aaPredicted RBP14.22□□□□□ -0.13
C2orf88-201ENST00000340623 AKAP2Q9Y2D5 859 aa14.22□□□□□ -0.13
C2orf88-201ENST00000340623 SLIT3O75094 1523 aa14.22□□□□□ -0.13
C2orf88-201ENST00000340623 MSL1Q68DK7 614 aa14.22□□□□□ -0.13
C2orf88-201ENST00000340623 GIGYF2Q6Y7W6 1299 aaKnown RBP14.22□□□□□ -0.13
C2orf88-201ENST00000340623 NYXQ9GZU5 481 aa14.22□□□□□ -0.13
C2orf88-201ENST00000340623 CNBD1Q8NA66 436 aa14.22□□□□□ -0.13
C2orf88-201ENST00000340623 KDM6AO15550 1401 aaPredicted RBP14.21□□□□□ -0.13
C2orf88-201ENST00000340623 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.21□□□□□ -0.13
C2orf88-201ENST00000340623 GLRX3O76003 335 aaKnown RBP14.21□□□□□ -0.13
C2orf88-201ENST00000340623 IFIT1P09914 478 aaKnown RBP14.21□□□□□ -0.13
C2orf88-201ENST00000340623 CYP19A1P11511 503 aaPredicted RBP14.21□□□□□ -0.13
C2orf88-201ENST00000340623 SMC5Q8IY18 1101 aa14.21□□□□□ -0.13
C2orf88-201ENST00000340623 SNRKQ9NRH2 765 aa14.21□□□□□ -0.13
C2orf88-201ENST00000340623 GNL3LQ9NVN8 582 aaKnown RBP14.21□□□□□ -0.13
C2orf88-201ENST00000340623 SRP68Q9UHB9 627 aaKnown RBP14.21□□□□□ -0.13
C2orf88-201ENST00000340623 CHAF1AQ13111 956 aaPredicted RBP14.21□□□□□ -0.14
C2orf88-201ENST00000340623 ANKRD18AQ8IVF6 992 aa14.21□□□□□ -0.14
C2orf88-201ENST00000340623 PODXL2Q9NZ53 605 aa14.2□□□□□ -0.14
C2orf88-201ENST00000340623 ABCF2Q9UG63 623 aa14.2□□□□□ -0.14
C2orf88-201ENST00000340623 ISY1Q9ULR0 285 aaKnown RBP14.2□□□□□ -0.14
C2orf88-201ENST00000340623 ECHDC1Q9NTX5 307 aa14.2□□□□□ -0.14
C2orf88-201ENST00000340623 PARP3Q9Y6F1 533 aa14.2□□□□□ -0.14
C2orf88-201ENST00000340623 IDH1O75874 414 aaKnown RBP14.19□□□□□ -0.14
C2orf88-201ENST00000340623 HLFQ16534 295 aa14.19□□□□□ -0.14
C2orf88-201ENST00000340623 NOL10Q9BSC4 688 aaKnown RBP14.19□□□□□ -0.14
C2orf88-201ENST00000340623 C22orf23Q9BZE7 217 aa14.19□□□□□ -0.14
C2orf88-201ENST00000340623 FOXD4L5Q5VV16 416 aaPredicted RBP14.19□□□□□ -0.14
C2orf88-201ENST00000340623 FOXD4L4Q8WXT5 416 aaPredicted RBP14.19□□□□□ -0.14
C2orf88-201ENST00000340623 C6orf229H3BNL8 230 aa14.19□□□□□ -0.14
C2orf88-201ENST00000340623 ITGA6P23229 1130 aa14.19□□□□□ -0.14
C2orf88-201ENST00000340623 CWC27Q6UX04 472 aaKnown RBP14.19□□□□□ -0.14
C2orf88-201ENST00000340623 PEAK1Q9H792 1746 aa14.19□□□□□ -0.14
C2orf88-201ENST00000340623 SHPRHQ149N8 1683 aa14.19□□□□□ -0.14
C2orf88-201ENST00000340623 IL15P40933 162 aaPredicted RBP14.19□□□□□ -0.14
C2orf88-201ENST00000340623 PHLPP1O60346 1717 aa14.18□□□□□ -0.14
C2orf88-201ENST00000340623 PDE8AO60658 829 aa14.18□□□□□ -0.14
C2orf88-201ENST00000340623 FBXO41Q8TF61 875 aa14.18□□□□□ -0.14
C2orf88-201ENST00000340623 SLC5A1P13866 664 aa14.18□□□□□ -0.14
C2orf88-201ENST00000340623 TFCP2Q12800 502 aa14.18□□□□□ -0.14
C2orf88-201ENST00000340623 OTUD7AQ8TE49 926 aaPredicted RBP14.18□□□□□ -0.14
C2orf88-201ENST00000340623 IQSEC3Q9UPP2 1182 aaPredicted RBP14.18□□□□□ -0.14
C2orf88-201ENST00000340623 ATP2B3Q16720 1220 aa14.18□□□□□ -0.14
C2orf88-201ENST00000340623 IGKV5-2P06315 115 aa14.17□□□□□ -0.14
C2orf88-201ENST00000340623 ZKSCAN1P17029 563 aaPredicted RBP14.17□□□□□ -0.14
C2orf88-201ENST00000340623 LTN1O94822 1766 aa14.17□□□□□ -0.14
C2orf88-201ENST00000340623 PDE1AP54750 535 aa14.17□□□□□ -0.14
C2orf88-201ENST00000340623 ITPK1Q13572 414 aa14.17□□□□□ -0.14
C2orf88-201ENST00000340623 TXNRD1Q16881 649 aa14.17□□□□□ -0.14
C2orf88-201ENST00000340623 CAVIN4Q5BKX8 364 aa14.17□□□□□ -0.14
C2orf88-201ENST00000340623 ZBTB38Q8NAP3 1195 aaPredicted RBP14.16□□□□□ -0.14
C2orf88-201ENST00000340623 ZMYND15Q9H091 742 aa14.16□□□□□ -0.14
C2orf88-201ENST00000340623 LRP2BPQ9P2M1 347 aa14.16□□□□□ -0.14
C2orf88-201ENST00000340623 RAI14Q9P0K7 980 aa14.16□□□□□ -0.14
C2orf88-201ENST00000340623 RPS6KA4O75676 772 aa14.15□□□□□ -0.14
C2orf88-201ENST00000340623 TIMM10P62072 90 aa14.15□□□□□ -0.14
C2orf88-201ENST00000340623 NFKBIBQ15653 356 aa14.15□□□□□ -0.14
C2orf88-201ENST00000340623 FOXD4L6Q3SYB3 417 aaPredicted RBP14.15□□□□□ -0.14
C2orf88-201ENST00000340623 FOXD4L3Q6VB84 417 aaPredicted RBP14.15□□□□□ -0.14
C2orf88-201ENST00000340623 NLRP10Q86W26 655 aa14.15□□□□□ -0.14
C2orf88-201ENST00000340623 EYA2O00167 538 aa14.15□□□□□ -0.14
C2orf88-201ENST00000340623 GOLIM4O00461 696 aa14.15□□□□□ -0.14
C2orf88-201ENST00000340623 PCCAP05165 728 aaPredicted RBP14.15□□□□□ -0.14
C2orf88-201ENST00000340623 STRCP1A6NGW2 1772 aa14.15□□□□□ -0.14
C2orf88-201ENST00000340623 ST18O60284 1047 aa14.15□□□□□ -0.14
C2orf88-201ENST00000340623 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.15□□□□□ -0.14
C2orf88-201ENST00000340623 NSFL1CQ9UNZ2 370 aaKnown RBP14.15□□□□□ -0.14
C2orf88-201ENST00000340623 EN1Q05925 392 aaPredicted RBP14.14□□□□□ -0.15
C2orf88-201ENST00000340623 HIP1O00291 1037 aa14.14□□□□□ -0.15
C2orf88-201ENST00000340623 SYNE4Q8N205 404 aa14.14□□□□□ -0.15
C2orf88-201ENST00000340623 ANP32BQ92688 251 aaKnown RBP14.14□□□□□ -0.15
C2orf88-201ENST00000340623 TNS2Q63HR2 1409 aa14.14□□□□□ -0.15
C2orf88-201ENST00000340623 TTC22Q5TAA0 569 aa14.14□□□□□ -0.15
C2orf88-201ENST00000340623 SSH3Q8TE77 659 aa14.14□□□□□ -0.15
C2orf88-201ENST00000340623 KDM2BQ8NHM5 1336 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms