RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 NLRP10Q86W26 655 aa18.87■□□□□ 0.61
ERCC1-203ENST00000340192 UTP14AQ9BVJ6 771 aaKnown RBP18.87■□□□□ 0.61
ERCC1-203ENST00000340192 GPBP1L1Q9HC44 474 aaPredicted RBP18.87■□□□□ 0.61
ERCC1-203ENST00000340192 RNF181Q9P0P0 153 aa18.87■□□□□ 0.61
ERCC1-203ENST00000340192 LAMB2P55268 1798 aa18.86■□□□□ 0.61
ERCC1-203ENST00000340192 TIAM2Q8IVF5 1701 aa18.86■□□□□ 0.61
ERCC1-203ENST00000340192 FANCIQ9NVI1 1328 aa18.86■□□□□ 0.61
ERCC1-203ENST00000340192 NFKBIEO00221 500 aa18.86■□□□□ 0.61
ERCC1-203ENST00000340192 CHMP4AQ9BY43 222 aa18.86■□□□□ 0.61
ERCC1-203ENST00000340192 PHAXQ9H814 394 aaKnown RBP18.86■□□□□ 0.61
ERCC1-203ENST00000340192 LMNB1P20700 586 aa18.85■□□□□ 0.61
ERCC1-203ENST00000340192 PRELPP51888 382 aa18.85■□□□□ 0.61
ERCC1-203ENST00000340192 DICER1Q9UPY3 1922 aaKnown RBP18.84■□□□□ 0.61
ERCC1-203ENST00000340192 RNF123Q5XPI4 1314 aa18.84■□□□□ 0.61
ERCC1-203ENST00000340192 ALDH1B1P30837 517 aa18.84■□□□□ 0.61
ERCC1-203ENST00000340192 TWISTNBQ3B726 338 aaPredicted RBP18.84■□□□□ 0.61
ERCC1-203ENST00000340192 C7orf43Q8WVR3 580 aa18.84■□□□□ 0.61
ERCC1-203ENST00000340192 GOLGA2Q08379 1002 aa18.83■□□□□ 0.6
ERCC1-203ENST00000340192 SOGA3Q5TF21 947 aa18.83■□□□□ 0.6
ERCC1-203ENST00000340192 C3orf67Q6ZVT6 689 aa18.83■□□□□ 0.6
ERCC1-203ENST00000340192 RPGRQ92834 1020 aaKnown RBP18.83■□□□□ 0.6
ERCC1-203ENST00000340192 ZNF428Q96B54 188 aa18.83■□□□□ 0.6
ERCC1-203ENST00000340192 TRMT112Q9UI30 125 aaKnown RBP18.83■□□□□ 0.6
ERCC1-203ENST00000340192 DDX60Q8IY21 1712 aaKnown RBP18.83■□□□□ 0.6
ERCC1-203ENST00000340192 ATP5J2-PTCD1G3V325 749 aa18.82■□□□□ 0.6
ERCC1-203ENST00000340192 HOXA10P31260 410 aaPredicted RBP18.82■□□□□ 0.6
ERCC1-203ENST00000340192 SLC10A5Q5PT55 438 aa18.82■□□□□ 0.6
ERCC1-203ENST00000340192 RIC3Q7Z5B4 369 aa18.82■□□□□ 0.6
ERCC1-203ENST00000340192 SYNE4Q8N205 404 aa18.82■□□□□ 0.6
ERCC1-203ENST00000340192 ISCA1Q9BUE6 129 aa18.82■□□□□ 0.6
ERCC1-203ENST00000340192 SPINK5Q9NQ38 1064 aaPredicted RBP18.82■□□□□ 0.6
ERCC1-203ENST00000340192 TCERG1O14776 1098 aaKnown RBP18.81■□□□□ 0.6
ERCC1-203ENST00000340192 OLFM4Q6UX06 510 aa18.81■□□□□ 0.6
ERCC1-203ENST00000340192 NLRP3Q96P20 1036 aa18.81■□□□□ 0.6
ERCC1-203ENST00000340192 STK31Q9BXU1 1019 aa18.81■□□□□ 0.6
ERCC1-203ENST00000340192 TAOK3Q9H2K8 898 aa18.81■□□□□ 0.6
ERCC1-203ENST00000340192 CACNA1FO60840 1977 aa18.81■□□□□ 0.6
ERCC1-203ENST00000340192 SH3TC1Q8TE82 1336 aa18.8■□□□□ 0.6
ERCC1-203ENST00000340192 LTBP3Q9NS15 1303 aa18.8■□□□□ 0.6
ERCC1-203ENST00000340192 HCLS1P14317 486 aaPredicted RBP18.8■□□□□ 0.6
ERCC1-203ENST00000340192 CCDC93Q567U6 631 aa18.8■□□□□ 0.6
ERCC1-203ENST00000340192 RBM17Q96I25 401 aaKnown RBP18.8■□□□□ 0.6
ERCC1-203ENST00000340192 ZC3H4Q9UPT8 1303 aaKnown RBP18.79■□□□□ 0.6
ERCC1-203ENST00000340192 CCER2I3L3R5 266 aa18.79■□□□□ 0.6
ERCC1-203ENST00000340192 DDX58O95786 925 aaKnown RBP18.79■□□□□ 0.6
ERCC1-203ENST00000340192 C1QTNF8P60827 252 aa18.79■□□□□ 0.6
ERCC1-203ENST00000340192 EXOSC9Q06265 439 aaKnown RBP18.79■□□□□ 0.6
ERCC1-203ENST00000340192 CRAMP1Q96RY5 1269 aa18.79■□□□□ 0.6
ERCC1-203ENST00000340192 ZNF521Q96K83 1311 aa18.78■□□□□ 0.6
ERCC1-203ENST00000340192 TRIM28Q13263 835 aaKnown RBP18.78■□□□□ 0.6
ERCC1-203ENST00000340192 FAM89AQ96GI7 184 aa18.78■□□□□ 0.6
ERCC1-203ENST00000340192 MYD88Q99836 296 aa18.78■□□□□ 0.6
ERCC1-203ENST00000340192 MYH16Q9H6N6 1097 aa18.78■□□□□ 0.6
ERCC1-203ENST00000340192 VAMP4O75379 141 aa18.77■□□□□ 0.6
ERCC1-203ENST00000340192 SLC4A2P04920 1241 aa18.77■□□□□ 0.6
ERCC1-203ENST00000340192 RTKN2Q8IZC4 609 aa18.77■□□□□ 0.6
ERCC1-203ENST00000340192 MAP3K2Q9Y2U5 619 aa18.77■□□□□ 0.6
ERCC1-203ENST00000340192 TAF1P21675 1872 aa18.77■□□□□ 0.6
ERCC1-203ENST00000340192 KDM2BQ8NHM5 1336 aa18.76■□□□□ 0.59
ERCC1-203ENST00000340192 KIF3CO14782 793 aa18.76■□□□□ 0.59
ERCC1-203ENST00000340192 FKBP4Q02790 459 aaKnown RBP eCLIP18.76■□□□□ 0.59
ERCC1-203ENST00000340192 RTL5Q5HYW3 569 aaPredicted RBP18.76■□□□□ 0.59
ERCC1-203ENST00000340192 G2E3Q7L622 706 aa18.76■□□□□ 0.59
ERCC1-203ENST00000340192 METTL22Q9BUU2 404 aaPredicted RBP18.76■□□□□ 0.59
ERCC1-203ENST00000340192 NMRK2Q9NPI5 230 aa18.76■□□□□ 0.59
ERCC1-203ENST00000340192 ABCC4O15439 1325 aa18.75■□□□□ 0.59
ERCC1-203ENST00000340192 SNED1Q8TER0 1413 aa18.75■□□□□ 0.59
ERCC1-203ENST00000340192 PI4KAP2A4QPH2 592 aa18.75■□□□□ 0.59
ERCC1-203ENST00000340192 PPEF1O14829 653 aaPredicted RBP18.75■□□□□ 0.59
ERCC1-203ENST00000340192 KSR2Q6VAB6 950 aa18.75■□□□□ 0.59
ERCC1-203ENST00000340192 PI4KAP1Q8N8J0 262 aa18.75■□□□□ 0.59
ERCC1-203ENST00000340192 SLC51AQ86UW1 340 aa18.74■□□□□ 0.59
ERCC1-203ENST00000340192 CCDC191Q8NCU4 936 aa18.74■□□□□ 0.59
ERCC1-203ENST00000340192 GLTPD2A6NH11 291 aa18.73■□□□□ 0.59
ERCC1-203ENST00000340192 CC2D2BQ6DHV5 1058 aa18.73■□□□□ 0.59
ERCC1-203ENST00000340192 ZBTB38Q8NAP3 1195 aaPredicted RBP18.73■□□□□ 0.59
ERCC1-203ENST00000340192 ZNF277Q9NRM2 450 aaPredicted RBP18.73■□□□□ 0.59
ERCC1-203ENST00000340192 CWC25Q9NXE8 425 aaPredicted RBP18.73■□□□□ 0.59
ERCC1-203ENST00000340192 IRS4O14654 1257 aaPredicted RBP18.72■□□□□ 0.59
ERCC1-203ENST00000340192 FLIIQ13045 1269 aa18.72■□□□□ 0.59
ERCC1-203ENST00000340192 DDX46Q7L014 1031 aaKnown RBP18.72■□□□□ 0.59
ERCC1-203ENST00000340192 DIEXFQ68CQ4 756 aaKnown RBP18.71■□□□□ 0.59
ERCC1-203ENST00000340192 PSMD1Q99460 953 aa18.71■□□□□ 0.59
ERCC1-203ENST00000340192 RRAGCQ9HB90 399 aa18.71■□□□□ 0.59
ERCC1-203ENST00000340192 ATP6V0A2Q9Y487 856 aa18.71■□□□□ 0.59
ERCC1-203ENST00000340192 BBOX1O75936 387 aa18.7■□□□□ 0.58
ERCC1-203ENST00000340192 PCCAP05165 728 aaPredicted RBP18.7■□□□□ 0.58
ERCC1-203ENST00000340192 IGKV5-2P06315 115 aa18.7■□□□□ 0.58
ERCC1-203ENST00000340192 NEXNQ0ZGT2 675 aa18.7■□□□□ 0.58
ERCC1-203ENST00000340192 SF3B3Q15393 1217 aaKnown RBP18.7■□□□□ 0.58
ERCC1-203ENST00000340192 GRIPAP1Q4V328 841 aa18.7■□□□□ 0.58
ERCC1-203ENST00000340192 WDR90Q96KV7 1748 aa18.69■□□□□ 0.58
ERCC1-203ENST00000340192 IARSP41252 1262 aaKnown RBP18.69■□□□□ 0.58
ERCC1-203ENST00000340192 FKBP5Q13451 457 aaPredicted RBP18.69■□□□□ 0.58
ERCC1-203ENST00000340192 GRAPQ13588 217 aa18.69■□□□□ 0.58
ERCC1-203ENST00000340192 CWF19L2Q2TBE0 894 aaKnown RBP18.69■□□□□ 0.58
ERCC1-203ENST00000340192 DPY19L2Q6NUT2 758 aa18.69■□□□□ 0.58
ERCC1-203ENST00000340192 GRAPLQ8TC17 118 aaPredicted RBP18.69■□□□□ 0.58
ERCC1-203ENST00000340192 JARID2Q92833 1246 aaPredicted RBP18.69■□□□□ 0.58
ERCC1-203ENST00000340192 TMX4Q9H1E5 349 aaPredicted RBP18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms