RNA–Protein interactions for RNA: ENST00000339486.7

RIOK3-201, Transcript of RIO kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RIOK3, Length 4,038 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-201ENST00000339486 TMX1Q9H3N1 280 aa14.56□□□□□ -0.08
RIOK3-201ENST00000339486 ZSCAN16Q9H4T2 348 aaPredicted RBP14.56□□□□□ -0.08
RIOK3-201ENST00000339486 USP16Q9Y5T5 823 aa14.56□□□□□ -0.08
RIOK3-201ENST00000339486 ASXL2Q76L83 1435 aa14.56□□□□□ -0.08
RIOK3-201ENST00000339486 DHX8Q14562 1220 aaKnown RBP14.56□□□□□ -0.08
RIOK3-201ENST00000339486 MYO5CQ9NQX4 1742 aa14.55□□□□□ -0.08
RIOK3-201ENST00000339486 POLR3DP05423 398 aaPredicted RBP14.55□□□□□ -0.08
RIOK3-201ENST00000339486 SKIDA1Q1XH10 827 aa14.55□□□□□ -0.08
RIOK3-201ENST00000339486 TSR1Q2NL82 804 aaKnown RBP14.55□□□□□ -0.08
RIOK3-201ENST00000339486 TTC6Q86TZ1 520 aa14.55□□□□□ -0.08
RIOK3-201ENST00000339486 JMYQ8N9B5 988 aa14.55□□□□□ -0.08
RIOK3-201ENST00000339486 NLRP2Q9NX02 1062 aa14.55□□□□□ -0.08
RIOK3-201ENST00000339486 TTC41PQ6P2S7 1318 aa14.55□□□□□ -0.08
RIOK3-201ENST00000339486 NBPF7P0C2Y1 421 aaPredicted RBP14.55□□□□□ -0.08
RIOK3-201ENST00000339486 AKAP17AQ02040 695 aaKnown RBP14.55□□□□□ -0.08
RIOK3-201ENST00000339486 ME3Q16798 604 aa14.55□□□□□ -0.08
RIOK3-201ENST00000339486 USP44Q9H0E7 712 aa14.55□□□□□ -0.08
RIOK3-201ENST00000339486 CBFA2T2O43439 604 aa14.55□□□□□ -0.08
RIOK3-201ENST00000339486 SLC3A2P08195 630 aaKnown RBP14.55□□□□□ -0.08
RIOK3-201ENST00000339486 FKBP4Q02790 459 aaKnown RBP eCLIP14.55□□□□□ -0.08
RIOK3-201ENST00000339486 AK7Q96M32 723 aa14.55□□□□□ -0.08
RIOK3-201ENST00000339486 TIGD1Q96MW7 591 aa14.55□□□□□ -0.08
RIOK3-201ENST00000339486 U3KPZ7 1027 aaPredicted RBP14.55□□□□□ -0.08
RIOK3-201ENST00000339486 Q6ZUG5 572 aa14.54□□□□□ -0.08
RIOK3-201ENST00000339486 FAM227BQ96M60 508 aa14.54□□□□□ -0.08
RIOK3-201ENST00000339486 HMG20BQ9P0W2 317 aa14.54□□□□□ -0.08
RIOK3-201ENST00000339486 DNAI1Q9UI46 699 aa14.54□□□□□ -0.08
RIOK3-201ENST00000339486 MAP3K19Q56UN5 1328 aa14.54□□□□□ -0.08
RIOK3-201ENST00000339486 LEO1Q8WVC0 666 aaPredicted RBP14.54□□□□□ -0.08
RIOK3-201ENST00000339486 KIAA0232Q92628 1395 aa14.54□□□□□ -0.08
RIOK3-201ENST00000339486 C8orf76Q96K31 380 aa14.54□□□□□ -0.08
RIOK3-201ENST00000339486 NRBP1Q9UHY1 535 aa14.54□□□□□ -0.08
RIOK3-201ENST00000339486 PTH1RQ03431 593 aa14.53□□□□□ -0.08
RIOK3-201ENST00000339486 ZSCAN25Q6NSZ9 544 aa14.53□□□□□ -0.08
RIOK3-201ENST00000339486 LEKR1Q6ZMV7 388 aa14.53□□□□□ -0.08
RIOK3-201ENST00000339486 AOX1Q06278 1338 aa14.53□□□□□ -0.08
RIOK3-201ENST00000339486 TOP1P11387 765 aaKnown RBP14.53□□□□□ -0.08
RIOK3-201ENST00000339486 CLSTN2Q9H4D0 955 aa14.53□□□□□ -0.08
RIOK3-201ENST00000339486 EDC4Q6P2E9 1401 aaKnown RBP14.53□□□□□ -0.08
RIOK3-201ENST00000339486 CWF19L2Q2TBE0 894 aaKnown RBP14.52□□□□□ -0.08
RIOK3-201ENST00000339486 SYT10Q6XYQ8 523 aa14.52□□□□□ -0.08
RIOK3-201ENST00000339486 DDX46Q7L014 1031 aaKnown RBP14.52□□□□□ -0.08
RIOK3-201ENST00000339486 RAB11FIP4Q86YS3 637 aa14.52□□□□□ -0.08
RIOK3-201ENST00000339486 IQSEC2Q5JU85 1478 aa14.52□□□□□ -0.08
RIOK3-201ENST00000339486 MAP3K4Q9Y6R4 1608 aa14.52□□□□□ -0.08
RIOK3-201ENST00000339486 ELF2Q15723 593 aa14.52□□□□□ -0.08
RIOK3-201ENST00000339486 MYD88Q99836 296 aa14.52□□□□□ -0.08
RIOK3-201ENST00000339486 FAM135BQ49AJ0 1406 aa14.52□□□□□ -0.09
RIOK3-201ENST00000339486 ADCK5Q3MIX3 580 aa14.52□□□□□ -0.09
RIOK3-201ENST00000339486 STAP2Q9UGK3 403 aa14.52□□□□□ -0.09
RIOK3-201ENST00000339486 SSH2Q76I76 1423 aa14.52□□□□□ -0.09
RIOK3-201ENST00000339486 LMOD1P29536 600 aaPredicted RBP14.51□□□□□ -0.09
RIOK3-201ENST00000339486 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.51□□□□□ -0.09
RIOK3-201ENST00000339486 GTF3C6Q969F1 213 aa14.51□□□□□ -0.09
RIOK3-201ENST00000339486 SYTL4Q96C24 671 aaPredicted RBP14.51□□□□□ -0.09
RIOK3-201ENST00000339486 HYPKQ9NX55 129 aa14.51□□□□□ -0.09
RIOK3-201ENST00000339486 SLC27A2O14975 620 aa14.51□□□□□ -0.09
RIOK3-201ENST00000339486 ZSCAN12O43309 604 aa14.51□□□□□ -0.09
RIOK3-201ENST00000339486 HMGB1P09429 215 aaKnown RBP14.51□□□□□ -0.09
RIOK3-201ENST00000339486 ARHGAP29Q52LW3 1261 aa14.51□□□□□ -0.09
RIOK3-201ENST00000339486 ANKRD20A12PQ8NF67 263 aa14.51□□□□□ -0.09
RIOK3-201ENST00000339486 SSH3Q8TE77 659 aa14.51□□□□□ -0.09
RIOK3-201ENST00000339486 NOM1Q5C9Z4 860 aaKnown RBP14.5□□□□□ -0.09
RIOK3-201ENST00000339486 ACBD3Q9H3P7 528 aa14.5□□□□□ -0.09
RIOK3-201ENST00000339486 ZSWIM4Q9H7M6 989 aa14.5□□□□□ -0.09
RIOK3-201ENST00000339486 JAK2O60674 1132 aa14.5□□□□□ -0.09
RIOK3-201ENST00000339486 ATP2B3Q16720 1220 aa14.5□□□□□ -0.09
RIOK3-201ENST00000339486 ESCO1Q5FWF5 840 aa14.5□□□□□ -0.09
RIOK3-201ENST00000339486 CCDC150Q8NCX0 1101 aa14.5□□□□□ -0.09
RIOK3-201ENST00000339486 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.5□□□□□ -0.09
RIOK3-201ENST00000339486 EPB41L2O43491 1005 aaKnown RBP14.5□□□□□ -0.09
RIOK3-201ENST00000339486 NR1I2O75469 434 aa14.5□□□□□ -0.09
RIOK3-201ENST00000339486 IPO7O95373 1038 aaKnown RBP14.5□□□□□ -0.09
RIOK3-201ENST00000339486 LARGE1O95461 756 aa14.5□□□□□ -0.09
RIOK3-201ENST00000339486 MRPS27Q92552 414 aaKnown RBP14.5□□□□□ -0.09
RIOK3-201ENST00000339486 ERCC4Q92889 916 aaPredicted RBP14.5□□□□□ -0.09
RIOK3-201ENST00000339486 ERO1AQ96HE7 468 aa14.5□□□□□ -0.09
RIOK3-201ENST00000339486 LSG1Q9H089 658 aaKnown RBP14.5□□□□□ -0.09
RIOK3-201ENST00000339486 IFNKQ9P0W0 207 aa14.5□□□□□ -0.09
RIOK3-201ENST00000339486 ZNF215Q9UL58 517 aaPredicted RBP14.5□□□□□ -0.09
RIOK3-201ENST00000339486 TPCN1Q9ULQ1 816 aa14.5□□□□□ -0.09
RIOK3-201ENST00000339486 POGZQ7Z3K3 1410 aa14.5□□□□□ -0.09
RIOK3-201ENST00000339486 GOLIM4O00461 696 aa14.5□□□□□ -0.09
RIOK3-201ENST00000339486 HSP90AA4PQ58FG1 418 aa14.5□□□□□ -0.09
RIOK3-201ENST00000339486 UTP14CQ5TAP6 766 aaKnown RBP14.5□□□□□ -0.09
RIOK3-201ENST00000339486 CDC42BPBQ9Y5S2 1711 aa14.5□□□□□ -0.09
RIOK3-201ENST00000339486 PPFIBP1Q86W92 1011 aa14.49□□□□□ -0.09
RIOK3-201ENST00000339486 RPS6KB1P23443 525 aa14.49□□□□□ -0.09
RIOK3-201ENST00000339486 GNG11P61952 73 aa14.49□□□□□ -0.09
RIOK3-201ENST00000339486 GABPB1Q06547 395 aaPredicted RBP14.49□□□□□ -0.09
RIOK3-201ENST00000339486 ZBTB9Q96C00 473 aa14.49□□□□□ -0.09
RIOK3-201ENST00000339486 MRVI1Q9Y6F6 885 aa14.49□□□□□ -0.09
RIOK3-201ENST00000339486 GRM8O00222 908 aa14.49□□□□□ -0.09
RIOK3-201ENST00000339486 HAND2P61296 217 aa14.49□□□□□ -0.09
RIOK3-201ENST00000339486 ORC3Q9UBD5 711 aaPredicted RBP14.49□□□□□ -0.09
RIOK3-201ENST00000339486 TULP1O00294 542 aaPredicted RBP14.48□□□□□ -0.09
RIOK3-201ENST00000339486 CHST3Q7LGC8 479 aa14.48□□□□□ -0.09
RIOK3-201ENST00000339486 TM6SF1Q9BZW5 370 aa14.48□□□□□ -0.09
RIOK3-201ENST00000339486 CASQ1P31415 396 aa14.48□□□□□ -0.09
RIOK3-201ENST00000339486 CCDC158Q5M9N0 1113 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms