RNA–Protein interactions for RNA: ENST00000338962.8

LRP1-202, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-202ENST00000338962 HSP90AB4PQ58FF6 505 aa13.59□□□□□ -0.23
LRP1-202ENST00000338962 XAGE3Q8WTP9 111 aa13.59□□□□□ -0.23
LRP1-202ENST00000338962 A1BGP04217 495 aa13.59□□□□□ -0.23
LRP1-202ENST00000338962 MTX1Q13505 466 aa13.59□□□□□ -0.23
LRP1-202ENST00000338962 COPS6Q7L5N1 327 aa13.59□□□□□ -0.23
LRP1-202ENST00000338962 KIF1BPQ96EK5 621 aa13.59□□□□□ -0.23
LRP1-202ENST00000338962 CCDC87Q9NVE4 849 aa13.59□□□□□ -0.23
LRP1-202ENST00000338962 NFKBIBQ15653 356 aa13.58□□□□□ -0.24
LRP1-202ENST00000338962 TSHZ3Q63HK5 1081 aa13.58□□□□□ -0.24
LRP1-202ENST00000338962 LRP10Q7Z4F1 713 aa13.58□□□□□ -0.24
LRP1-202ENST00000338962 IL1RAPL2Q9NP60 686 aa13.58□□□□□ -0.24
LRP1-202ENST00000338962 NBPF26B4DH59 902 aa13.58□□□□□ -0.24
LRP1-202ENST00000338962 RPS6KA4O75676 772 aa13.58□□□□□ -0.24
LRP1-202ENST00000338962 NBPF14Q5TI25 921 aa13.58□□□□□ -0.24
LRP1-202ENST00000338962 NBPF10Q6P3W6 841 aaKnown RBP13.58□□□□□ -0.24
LRP1-202ENST00000338962 NBPF15Q8N660 670 aa13.58□□□□□ -0.24
LRP1-202ENST00000338962 RHPN1Q8TCX5 695 aa13.58□□□□□ -0.24
LRP1-202ENST00000338962 STAP2Q9UGK3 403 aa13.58□□□□□ -0.24
LRP1-202ENST00000338962 ZBTB1Q9Y2K1 713 aa13.58□□□□□ -0.24
LRP1-202ENST00000338962 IL6STP40189 918 aaPredicted RBP13.57□□□□□ -0.24
LRP1-202ENST00000338962 OS9Q13438 667 aaPredicted RBP13.57□□□□□ -0.24
LRP1-202ENST00000338962 ANKRD13DQ6ZTN6 518 aa13.57□□□□□ -0.24
LRP1-202ENST00000338962 UTYO14607 1347 aa13.57□□□□□ -0.24
LRP1-202ENST00000338962 AOX1Q06278 1338 aa13.57□□□□□ -0.24
LRP1-202ENST00000338962 TJP1Q07157 1748 aa13.57□□□□□ -0.24
LRP1-202ENST00000338962 REC8O95072 547 aa13.56□□□□□ -0.24
LRP1-202ENST00000338962 EIF5P55010 431 aaKnown RBP13.56□□□□□ -0.24
LRP1-202ENST00000338962 SLC15A2Q16348 729 aa13.56□□□□□ -0.24
LRP1-202ENST00000338962 ZNF827Q17R98 1081 aa13.56□□□□□ -0.24
LRP1-202ENST00000338962 SNX21Q969T3 373 aa13.56□□□□□ -0.24
LRP1-202ENST00000338962 KIF2CQ99661 725 aa13.56□□□□□ -0.24
LRP1-202ENST00000338962 TRIM6-TRIM34B2RNG4 842 aa13.56□□□□□ -0.24
LRP1-202ENST00000338962 IGKV5-2P06315 115 aa13.56□□□□□ -0.24
LRP1-202ENST00000338962 PIP4K2AP48426 406 aaPredicted RBP13.56□□□□□ -0.24
LRP1-202ENST00000338962 AK7Q96M32 723 aa13.56□□□□□ -0.24
LRP1-202ENST00000338962 METTL22Q9BUU2 404 aaPredicted RBP13.56□□□□□ -0.24
LRP1-202ENST00000338962 NEURL1BA8MQ27 555 aa13.55□□□□□ -0.24
LRP1-202ENST00000338962 ERC2O15083 957 aa13.55□□□□□ -0.24
LRP1-202ENST00000338962 MYD88Q99836 296 aa13.55□□□□□ -0.24
LRP1-202ENST00000338962 ANTXR1Q9H6X2 564 aa13.55□□□□□ -0.24
LRP1-202ENST00000338962 RTCBQ9Y3I0 505 aaKnown RBP13.55□□□□□ -0.24
LRP1-202ENST00000338962 LAMB4A4D0S4 1761 aa13.55□□□□□ -0.24
LRP1-202ENST00000338962 GNPATO15228 680 aa13.55□□□□□ -0.24
LRP1-202ENST00000338962 ADRA2BP18089 450 aa13.55□□□□□ -0.24
LRP1-202ENST00000338962 SSFA2P28290 1259 aa13.55□□□□□ -0.24
LRP1-202ENST00000338962 AMIGO3Q86WK7 504 aa13.55□□□□□ -0.24
LRP1-202ENST00000338962 NUTM1Q86Y26 1132 aa13.55□□□□□ -0.24
LRP1-202ENST00000338962 SPRYD3Q8NCJ5 442 aa13.55□□□□□ -0.24
LRP1-202ENST00000338962 STK32BQ9NY57 414 aa13.55□□□□□ -0.24
LRP1-202ENST00000338962 RREB1Q92766 1687 aa13.55□□□□□ -0.24
LRP1-202ENST00000338962 GCKRQ14397 625 aa13.54□□□□□ -0.24
LRP1-202ENST00000338962 ERC1Q8IUD2 1116 aa13.54□□□□□ -0.24
LRP1-202ENST00000338962 RILPL2Q969X0 211 aa13.54□□□□□ -0.24
LRP1-202ENST00000338962 SUCLG2Q96I99 432 aa13.54□□□□□ -0.24
LRP1-202ENST00000338962 USP26Q9BXU7 913 aa13.54□□□□□ -0.24
LRP1-202ENST00000338962 BICC1Q9H694 974 aaKnown RBP13.54□□□□□ -0.24
LRP1-202ENST00000338962 C4BP0C0L5 1744 aa13.54□□□□□ -0.24
LRP1-202ENST00000338962 FLAD1Q8NFF5 587 aa13.54□□□□□ -0.24
LRP1-202ENST00000338962 TFCP2L1Q9NZI6 479 aa13.54□□□□□ -0.24
LRP1-202ENST00000338962 COL5A3P25940 1745 aaPredicted RBP13.53□□□□□ -0.24
LRP1-202ENST00000338962 CLASRPQ8N2M8 674 aaKnown RBP13.53□□□□□ -0.24
LRP1-202ENST00000338962 TRAPPC3LQ5T215 181 aa13.52□□□□□ -0.24
LRP1-202ENST00000338962 KAZALD1Q96I82 304 aa13.52□□□□□ -0.24
LRP1-202ENST00000338962 TUBGCP6Q96RT7 1819 aa13.52□□□□□ -0.25
LRP1-202ENST00000338962 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.52□□□□□ -0.25
LRP1-202ENST00000338962 RABEP1Q15276 862 aa13.52□□□□□ -0.25
LRP1-202ENST00000338962 PLBD2Q8NHP8 589 aa13.52□□□□□ -0.25
LRP1-202ENST00000338962 ARHGEF1Q92888 912 aaKnown RBP13.52□□□□□ -0.25
LRP1-202ENST00000338962 TAF1LQ8IZX4 1826 aa13.51□□□□□ -0.25
LRP1-202ENST00000338962 A0A087WZG4 1122 aa13.51□□□□□ -0.25
LRP1-202ENST00000338962 FRAT2O75474 233 aaPredicted RBP13.51□□□□□ -0.25
LRP1-202ENST00000338962 PA2G4Q9UQ80 394 aaKnown RBP13.51□□□□□ -0.25
LRP1-202ENST00000338962 MYH14Q7Z406 1995 aaKnown RBP13.51□□□□□ -0.25
LRP1-202ENST00000338962 PNPLA7Q6ZV29 1317 aa13.51□□□□□ -0.25
LRP1-202ENST00000338962 NUP188Q5SRE5 1749 aa13.51□□□□□ -0.25
LRP1-202ENST00000338962 RGL2O15211 777 aa13.51□□□□□ -0.25
LRP1-202ENST00000338962 PI4K2BQ8TCG2 481 aa13.51□□□□□ -0.25
LRP1-202ENST00000338962 ESYT1Q9BSJ8 1104 aa13.51□□□□□ -0.25
LRP1-202ENST00000338962 COL15A1P39059 1388 aa13.5□□□□□ -0.25
LRP1-202ENST00000338962 HSP90AA1P07900 732 aaKnown RBP13.5□□□□□ -0.25
LRP1-202ENST00000338962 CHMLP26374 656 aa13.5□□□□□ -0.25
LRP1-202ENST00000338962 SMIM5Q71RC9 77 aa13.5□□□□□ -0.25
LRP1-202ENST00000338962 COL23A1Q86Y22 540 aaPredicted RBP13.5□□□□□ -0.25
LRP1-202ENST00000338962 GPATCH3Q96I76 525 aa13.5□□□□□ -0.25
LRP1-202ENST00000338962 TTC41PQ6P2S7 1318 aa13.5□□□□□ -0.25
LRP1-202ENST00000338962 ARFGEF2Q9Y6D5 1785 aa13.5□□□□□ -0.25
LRP1-202ENST00000338962 ERVV-1B6SEH8 477 aa13.49□□□□□ -0.25
LRP1-202ENST00000338962 K7ELQ4 463 aaPredicted RBP13.49□□□□□ -0.25
LRP1-202ENST00000338962 G3BP1Q13283 466 aaKnown RBP eCLIP13.49□□□□□ -0.25
LRP1-202ENST00000338962 CHMP5Q9NZZ3 219 aa13.49□□□□□ -0.25
LRP1-202ENST00000338962 NARFQ9UHQ1 456 aa13.49□□□□□ -0.25
LRP1-202ENST00000338962 ATP5J2-PTCD1G3V325 749 aa13.49□□□□□ -0.25
LRP1-202ENST00000338962 GLRX3O76003 335 aaKnown RBP13.49□□□□□ -0.25
LRP1-202ENST00000338962 CD2BP2O95400 341 aaKnown RBP13.49□□□□□ -0.25
LRP1-202ENST00000338962 IFIT2P09913 472 aaKnown RBP13.49□□□□□ -0.25
LRP1-202ENST00000338962 TTLL7Q6ZT98 887 aa13.49□□□□□ -0.25
LRP1-202ENST00000338962 UBE3BQ7Z3V4 1068 aa13.49□□□□□ -0.25
LRP1-202ENST00000338962 DZIP3Q86Y13 1208 aaKnown RBP13.49□□□□□ -0.25
LRP1-202ENST00000338962 CNTROBQ8N137 903 aa13.49□□□□□ -0.25
LRP1-202ENST00000338962 USP42Q9H9J4 1324 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms