RNA–Protein interactions for RNA: ENST00000338784.8

TNFSF13-201, Transcript of TNF superfamily member 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,971 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-201ENST00000338784 FOXD4L3Q6VB84 417 aaPredicted RBP18.1■□□□□ 0.49
TNFSF13-201ENST00000338784 COPS6Q7L5N1 327 aa18.1■□□□□ 0.49
TNFSF13-201ENST00000338784 JAKMIP1Q96N16 626 aaKnown RBP18.1■□□□□ 0.49
TNFSF13-201ENST00000338784 METTL22Q9BUU2 404 aaPredicted RBP18.1■□□□□ 0.49
TNFSF13-201ENST00000338784 CCDC8Q9H0W5 538 aaPredicted RBP18.1■□□□□ 0.49
TNFSF13-201ENST00000338784 CCDC171Q6TFL3 1326 aa18.1■□□□□ 0.49
TNFSF13-201ENST00000338784 ZKSCAN1P17029 563 aaPredicted RBP18.1■□□□□ 0.49
TNFSF13-201ENST00000338784 NECTIN1Q15223 517 aa18.1■□□□□ 0.49
TNFSF13-201ENST00000338784 USP48Q86UV5 1035 aa18.1■□□□□ 0.49
TNFSF13-201ENST00000338784 LARP6Q9BRS8 491 aaKnown RBP18.1■□□□□ 0.49
TNFSF13-201ENST00000338784 SIL1Q9H173 461 aa18.1■□□□□ 0.49
TNFSF13-201ENST00000338784 ZSWIM6Q9HCJ5 1215 aa18.1■□□□□ 0.49
TNFSF13-201ENST00000338784 PDRG1Q9NUG6 133 aa18.1■□□□□ 0.49
TNFSF13-201ENST00000338784 SMC3Q9UQE7 1217 aa18.1■□□□□ 0.49
TNFSF13-201ENST00000338784 CYP46A1Q9Y6A2 500 aa18.1■□□□□ 0.49
TNFSF13-201ENST00000338784 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.1■□□□□ 0.49
TNFSF13-201ENST00000338784 ZSCAN22P10073 491 aaPredicted RBP18.09■□□□□ 0.49
TNFSF13-201ENST00000338784 CPA1P15085 419 aa18.09■□□□□ 0.49
TNFSF13-201ENST00000338784 CADPS2Q86UW7 1296 aa18.09■□□□□ 0.49
TNFSF13-201ENST00000338784 ZNF496Q96IT1 587 aaPredicted RBP18.09■□□□□ 0.49
TNFSF13-201ENST00000338784 MYD88Q99836 296 aa18.09■□□□□ 0.49
TNFSF13-201ENST00000338784 STX6O43752 255 aa18.08■□□□□ 0.49
TNFSF13-201ENST00000338784 SNRPA1P09661 255 aaKnown RBP18.08■□□□□ 0.49
TNFSF13-201ENST00000338784 CSB-PGBD3P0DP91 1061 aa18.08■□□□□ 0.49
TNFSF13-201ENST00000338784 SYT1P21579 422 aa18.08■□□□□ 0.49
TNFSF13-201ENST00000338784 ADCK5Q3MIX3 580 aa18.08■□□□□ 0.49
TNFSF13-201ENST00000338784 ZSCAN30Q86W11 494 aa18.08■□□□□ 0.49
TNFSF13-201ENST00000338784 TTC5Q8N0Z6 440 aa18.08■□□□□ 0.49
TNFSF13-201ENST00000338784 ZSCAN31Q96LW9 406 aaPredicted RBP18.08■□□□□ 0.49
TNFSF13-201ENST00000338784 GDPD2Q9HCC8 539 aa18.08■□□□□ 0.49
TNFSF13-201ENST00000338784 NMIQ13287 307 aaPredicted RBP18.08■□□□□ 0.48
TNFSF13-201ENST00000338784 HS1BP3Q53T59 392 aa18.08■□□□□ 0.48
TNFSF13-201ENST00000338784 ANKRD13DQ6ZTN6 518 aa18.08■□□□□ 0.48
TNFSF13-201ENST00000338784 TMEM87AQ8NBN3 555 aa18.08■□□□□ 0.48
TNFSF13-201ENST00000338784 DCAF5Q96JK2 942 aa18.08■□□□□ 0.48
TNFSF13-201ENST00000338784 PDLIM2Q96JY6 352 aa18.08■□□□□ 0.48
TNFSF13-201ENST00000338784 SH2B1Q9NRF2 756 aaPredicted RBP18.08■□□□□ 0.48
TNFSF13-201ENST00000338784 TLR7Q9NYK1 1049 aaKnown RBP18.08■□□□□ 0.48
TNFSF13-201ENST00000338784 MEGF6O75095 1541 aa18.07■□□□□ 0.48
TNFSF13-201ENST00000338784 ABCC6O95255 1503 aa18.07■□□□□ 0.48
TNFSF13-201ENST00000338784 MAP4K1Q92918 833 aa18.07■□□□□ 0.48
TNFSF13-201ENST00000338784 FAM227BQ96M60 508 aa18.07■□□□□ 0.48
TNFSF13-201ENST00000338784 SNRKQ9NRH2 765 aa18.07■□□□□ 0.48
TNFSF13-201ENST00000338784 RBM8AQ9Y5S9 174 aaKnown RBP18.07■□□□□ 0.48
TNFSF13-201ENST00000338784 GADD45BO75293 160 aaPredicted RBP18.06■□□□□ 0.48
TNFSF13-201ENST00000338784 PHF14O94880 888 aa18.06■□□□□ 0.48
TNFSF13-201ENST00000338784 KCNJ4P48050 445 aa18.06■□□□□ 0.48
TNFSF13-201ENST00000338784 KLHDC4Q8TBB5 520 aa18.06■□□□□ 0.48
TNFSF13-201ENST00000338784 NAP1L5Q96NT1 182 aaPredicted RBP18.06■□□□□ 0.48
TNFSF13-201ENST00000338784 BOLA2Q9H3K6 86 aa18.06■□□□□ 0.48
TNFSF13-201ENST00000338784 ATP6V1DQ9Y5K8 247 aa18.06■□□□□ 0.48
TNFSF13-201ENST00000338784 PLEKHG2Q9H7P9 1386 aa18.06■□□□□ 0.48
TNFSF13-201ENST00000338784 RGPD5Q99666 1765 aa18.06■□□□□ 0.48
TNFSF13-201ENST00000338784 LARGE1O95461 756 aa18.06■□□□□ 0.48
TNFSF13-201ENST00000338784 EPHA10Q5JZY3 1008 aa18.06■□□□□ 0.48
TNFSF13-201ENST00000338784 CREB3L3Q68CJ9 461 aa18.06■□□□□ 0.48
TNFSF13-201ENST00000338784 DDX17Q92841 729 aaKnown RBP18.06■□□□□ 0.48
TNFSF13-201ENST00000338784 FSD1Q9BTV5 496 aa18.06■□□□□ 0.48
TNFSF13-201ENST00000338784 USP16Q9Y5T5 823 aa18.06■□□□□ 0.48
TNFSF13-201ENST00000338784 TNS3Q68CZ2 1445 aa18.05■□□□□ 0.48
TNFSF13-201ENST00000338784 LRP10Q7Z4F1 713 aa18.05■□□□□ 0.48
TNFSF13-201ENST00000338784 CCDC83Q8IWF9 413 aa18.05■□□□□ 0.48
TNFSF13-201ENST00000338784 FMNL2Q96PY5 1086 aa18.05■□□□□ 0.48
TNFSF13-201ENST00000338784 F13A1P00488 732 aa18.04■□□□□ 0.48
TNFSF13-201ENST00000338784 PSMA5P28066 241 aa18.04■□□□□ 0.48
TNFSF13-201ENST00000338784 TSPY26PQ9H489 355 aa18.04■□□□□ 0.48
TNFSF13-201ENST00000338784 COPRSQ9NQ92 184 aa18.04■□□□□ 0.48
TNFSF13-201ENST00000338784 CYP27B1O15528 508 aa18.04■□□□□ 0.48
TNFSF13-201ENST00000338784 MSNP26038 577 aaKnown RBP18.04■□□□□ 0.48
TNFSF13-201ENST00000338784 GJB2P29033 226 aa18.04■□□□□ 0.48
TNFSF13-201ENST00000338784 CNPY2Q9Y2B0 182 aa18.04■□□□□ 0.48
TNFSF13-201ENST00000338784 A0A0D9SFI3 127 aa18.03■□□□□ 0.48
TNFSF13-201ENST00000338784 RNF20Q5VTR2 975 aa18.03■□□□□ 0.48
TNFSF13-201ENST00000338784 CABLES1Q8TDN4 633 aa18.03■□□□□ 0.48
TNFSF13-201ENST00000338784 MRC1P22897 1456 aa18.03■□□□□ 0.48
TNFSF13-201ENST00000338784 C5P01031 1676 aa18.03■□□□□ 0.48
TNFSF13-201ENST00000338784 SCN11AQ9UI33 1791 aa18.03■□□□□ 0.48
TNFSF13-201ENST00000338784 COL18A1P39060 1754 aa18.02■□□□□ 0.48
TNFSF13-201ENST00000338784 SLC27A2O14975 620 aa18.02■□□□□ 0.48
TNFSF13-201ENST00000338784 CABP4P57796 275 aa18.02■□□□□ 0.47
TNFSF13-201ENST00000338784 CHRNA2Q15822 529 aa18.02■□□□□ 0.47
TNFSF13-201ENST00000338784 ME3Q16798 604 aa18.02■□□□□ 0.47
TNFSF13-201ENST00000338784 RFX5P48382 616 aaPredicted RBP18.01■□□□□ 0.47
TNFSF13-201ENST00000338784 PIP4K2AP48426 406 aaPredicted RBP18.01■□□□□ 0.47
TNFSF13-201ENST00000338784 UBE2HP62256 183 aa18.01■□□□□ 0.47
TNFSF13-201ENST00000338784 PTPN12Q05209 780 aaKnown RBP18.01■□□□□ 0.47
TNFSF13-201ENST00000338784 RABL6Q3YEC7 729 aaPredicted RBP18.01■□□□□ 0.47
TNFSF13-201ENST00000338784 RNF214Q8ND24 703 aa18.01■□□□□ 0.47
TNFSF13-201ENST00000338784 COL15A1P39059 1388 aa18.01■□□□□ 0.47
TNFSF13-201ENST00000338784 MED23Q9ULK4 1368 aa18.01■□□□□ 0.47
TNFSF13-201ENST00000338784 ATP5JP18859 108 aa18■□□□□ 0.47
TNFSF13-201ENST00000338784 UBE3BQ7Z3V4 1068 aa18■□□□□ 0.47
TNFSF13-201ENST00000338784 DDX54Q8TDD1 881 aaKnown RBP18■□□□□ 0.47
TNFSF13-201ENST00000338784 NOL7Q9UMY1 257 aaKnown RBP18■□□□□ 0.47
TNFSF13-201ENST00000338784 MTMR6Q9Y217 621 aa18■□□□□ 0.47
TNFSF13-201ENST00000338784 CSPP1Q1MSJ5 1256 aa18■□□□□ 0.47
TNFSF13-201ENST00000338784 TNNI3KQ59H18 835 aa18■□□□□ 0.47
TNFSF13-201ENST00000338784 CCDC183Q5T5S1 534 aa18■□□□□ 0.47
TNFSF13-201ENST00000338784 JARID2Q92833 1246 aaPredicted RBP18■□□□□ 0.47
TNFSF13-201ENST00000338784 TPCN1Q9ULQ1 816 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms