RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 PPP1R42Q7Z4L9 355 aa15.35■□□□□ 0.05
COL2A1-201ENST00000337299 CFAP43Q8NDM7 1665 aa15.35■□□□□ 0.05
COL2A1-201ENST00000337299 IRX5P78411 483 aaPredicted RBP15.35■□□□□ 0.05
COL2A1-201ENST00000337299 TRIM35Q9UPQ4 493 aa15.35■□□□□ 0.05
COL2A1-201ENST00000337299 ZNF526Q8TF50 670 aaPredicted RBP15.35■□□□□ 0.05
COL2A1-201ENST00000337299 LZTFL1Q9NQ48 299 aa15.34■□□□□ 0.05
COL2A1-201ENST00000337299 KDM6BO15054 1643 aa15.34■□□□□ 0.05
COL2A1-201ENST00000337299 ATP2C2O75185 946 aa15.34■□□□□ 0.05
COL2A1-201ENST00000337299 CLSTN1O94985 981 aa15.34■□□□□ 0.05
COL2A1-201ENST00000337299 DNA2P51530 1060 aa15.34■□□□□ 0.05
COL2A1-201ENST00000337299 DDX58O95786 925 aaKnown RBP15.34■□□□□ 0.05
COL2A1-201ENST00000337299 CCDC181Q5TID7 509 aa15.34■□□□□ 0.05
COL2A1-201ENST00000337299 TTC5Q8N0Z6 440 aa15.34■□□□□ 0.05
COL2A1-201ENST00000337299 WASLO00401 505 aaPredicted RBP15.34■□□□□ 0.05
COL2A1-201ENST00000337299 CACTINQ8WUQ7 758 aaKnown RBP15.34■□□□□ 0.05
COL2A1-201ENST00000337299 RBM8AQ9Y5S9 174 aaKnown RBP15.34■□□□□ 0.05
COL2A1-201ENST00000337299 NCKAP5LQ9HCH0 1330 aa15.33■□□□□ 0.05
COL2A1-201ENST00000337299 PPP2R3AQ06190 1150 aa15.33■□□□□ 0.05
COL2A1-201ENST00000337299 FLIIQ13045 1269 aa15.33■□□□□ 0.05
COL2A1-201ENST00000337299 ODF2Q5BJF6 829 aa15.33■□□□□ 0.05
COL2A1-201ENST00000337299 DHX16O60231 1041 aaKnown RBP15.33■□□□□ 0.04
COL2A1-201ENST00000337299 TAF7Q15545 349 aaPredicted RBP15.33■□□□□ 0.04
COL2A1-201ENST00000337299 A0A087WWV3 80 aa15.33■□□□□ 0.04
COL2A1-201ENST00000337299 SMC1AQ14683 1233 aaKnown RBP15.33■□□□□ 0.04
COL2A1-201ENST00000337299 ERC1Q8IUD2 1116 aa15.33■□□□□ 0.04
COL2A1-201ENST00000337299 UHRF1BP1Q6BDS2 1440 aa15.33■□□□□ 0.04
COL2A1-201ENST00000337299 KRT32Q14532 448 aa15.32■□□□□ 0.04
COL2A1-201ENST00000337299 FBXO38Q6PIJ6 1188 aa15.32■□□□□ 0.04
COL2A1-201ENST00000337299 ST7Q9NRC1 585 aa15.32■□□□□ 0.04
COL2A1-201ENST00000337299 SEC31AO94979 1220 aaKnown RBP15.32■□□□□ 0.04
COL2A1-201ENST00000337299 LARP1Q6PKG0 1096 aaKnown RBP15.32■□□□□ 0.04
COL2A1-201ENST00000337299 RHPN1Q8TCX5 695 aa15.32■□□□□ 0.04
COL2A1-201ENST00000337299 GOLGA1Q92805 767 aa15.32■□□□□ 0.04
COL2A1-201ENST00000337299 C8orf76Q96K31 380 aa15.32■□□□□ 0.04
COL2A1-201ENST00000337299 ANKRD65E5RJM6 399 aa15.32■□□□□ 0.04
COL2A1-201ENST00000337299 MATR3P43243 847 aaKnown RBP eCLIP15.32■□□□□ 0.04
COL2A1-201ENST00000337299 ZNF710Q8N1W2 664 aa15.32■□□□□ 0.04
COL2A1-201ENST00000337299 ZRANB1Q9UGI0 708 aa15.32■□□□□ 0.04
COL2A1-201ENST00000337299 FAM135AQ9P2D6 1515 aa15.32■□□□□ 0.04
COL2A1-201ENST00000337299 WDR7Q9Y4E6 1490 aa15.32■□□□□ 0.04
COL2A1-201ENST00000337299 KIAA1328Q86T90 577 aa15.31■□□□□ 0.04
COL2A1-201ENST00000337299 RRP12Q5JTH9 1297 aaKnown RBP15.31■□□□□ 0.04
COL2A1-201ENST00000337299 USHBP1Q8N6Y0 703 aa15.31■□□□□ 0.04
COL2A1-201ENST00000337299 INSRP06213 1382 aa15.31■□□□□ 0.04
COL2A1-201ENST00000337299 CDC37L1Q7L3B6 337 aa15.31■□□□□ 0.04
COL2A1-201ENST00000337299 CEP57Q86XR8 500 aa15.31■□□□□ 0.04
COL2A1-201ENST00000337299 DDX41Q9UJV9 622 aaKnown RBP15.31■□□□□ 0.04
COL2A1-201ENST00000337299 ANKRD36BQ8N2N9 1353 aa15.3■□□□□ 0.04
COL2A1-201ENST00000337299 TARBP1Q13395 1621 aaKnown RBP15.3■□□□□ 0.04
COL2A1-201ENST00000337299 FYB1O15117 783 aa15.3■□□□□ 0.04
COL2A1-201ENST00000337299 ANXA1P04083 346 aa15.3■□□□□ 0.04
COL2A1-201ENST00000337299 E2F4Q16254 413 aa15.3■□□□□ 0.04
COL2A1-201ENST00000337299 CCDC148Q8NFR7 591 aa15.3■□□□□ 0.04
COL2A1-201ENST00000337299 ECHDC1Q9NTX5 307 aa15.3■□□□□ 0.04
COL2A1-201ENST00000337299 GOLGA6L10A6NI86 522 aa15.3■□□□□ 0.04
COL2A1-201ENST00000337299 TDO2P48775 406 aa15.3■□□□□ 0.04
COL2A1-201ENST00000337299 PPARDQ03181 441 aa15.3■□□□□ 0.04
COL2A1-201ENST00000337299 A0A1B0GVL5 298 aa15.3■□□□□ 0.04
COL2A1-201ENST00000337299 MAP9Q49MG5 647 aa15.3■□□□□ 0.04
COL2A1-201ENST00000337299 CNNM3Q8NE01 707 aa15.3■□□□□ 0.04
COL2A1-201ENST00000337299 STRN4Q9NRL3 753 aa15.3■□□□□ 0.04
COL2A1-201ENST00000337299 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.3■□□□□ 0.04
COL2A1-201ENST00000337299 A2MP01023 1474 aa15.3■□□□□ 0.04
COL2A1-201ENST00000337299 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.29■□□□□ 0.04
COL2A1-201ENST00000337299 CCDC82Q8N4S0 544 aa15.29■□□□□ 0.04
COL2A1-201ENST00000337299 CTNNA3Q9UI47 895 aa15.29■□□□□ 0.04
COL2A1-201ENST00000337299 ZDHHC9Q9Y397 364 aa15.29■□□□□ 0.04
COL2A1-201ENST00000337299 RAD50Q92878 1312 aa15.29■□□□□ 0.04
COL2A1-201ENST00000337299 MARCKSP29966 332 aaPredicted RBP15.29■□□□□ 0.04
COL2A1-201ENST00000337299 ARID5BQ14865 1188 aa15.29■□□□□ 0.04
COL2A1-201ENST00000337299 ZNHIT6Q9NWK9 470 aaKnown RBP15.29■□□□□ 0.04
COL2A1-201ENST00000337299 SNX14Q9Y5W7 946 aa15.29■□□□□ 0.04
COL2A1-201ENST00000337299 TTC6Q86TZ1 520 aa15.29■□□□□ 0.04
COL2A1-201ENST00000337299 KIF2CQ99661 725 aa15.29■□□□□ 0.04
COL2A1-201ENST00000337299 DACH1Q9UI36 760 aa15.29■□□□□ 0.04
COL2A1-201ENST00000337299 ZMYM3Q14202 1370 aa15.29■□□□□ 0.04
COL2A1-201ENST00000337299 CEP170Q5SW79 1584 aa15.29■□□□□ 0.04
COL2A1-201ENST00000337299 PTPRCP08575 1304 aa15.29■□□□□ 0.04
COL2A1-201ENST00000337299 EBAG9O00559 213 aa15.29■□□□□ 0.04
COL2A1-201ENST00000337299 GYS2P54840 703 aa15.29■□□□□ 0.04
COL2A1-201ENST00000337299 MAGI2Q86UL8 1455 aa15.28■□□□□ 0.04
COL2A1-201ENST00000337299 LRRFIP1Q32MZ4 808 aaKnown RBP15.28■□□□□ 0.04
COL2A1-201ENST00000337299 MRPS27Q92552 414 aaKnown RBP15.28■□□□□ 0.04
COL2A1-201ENST00000337299 NBPF11Q86T75 865 aa15.28■□□□□ 0.04
COL2A1-201ENST00000337299 CLSTN2Q9H4D0 955 aa15.28■□□□□ 0.04
COL2A1-201ENST00000337299 CTAGE15A4D2H0 777 aa15.28■□□□□ 0.04
COL2A1-201ENST00000337299 CTAGE8P0CG41 777 aa15.28■□□□□ 0.04
COL2A1-201ENST00000337299 CCDC91Q7Z6B0 441 aa15.28■□□□□ 0.04
COL2A1-201ENST00000337299 CTAGE6Q86UF2 777 aa15.28■□□□□ 0.04
COL2A1-201ENST00000337299 LRRC8AQ8IWT6 810 aa15.28■□□□□ 0.04
COL2A1-201ENST00000337299 CTAGE4Q8IX94 777 aa15.28■□□□□ 0.04
COL2A1-201ENST00000337299 LEO1Q8WVC0 666 aaPredicted RBP15.28■□□□□ 0.04
COL2A1-201ENST00000337299 NR1I2O75469 434 aa15.27■□□□□ 0.04
COL2A1-201ENST00000337299 NEK1Q96PY6 1258 aa15.27■□□□□ 0.04
COL2A1-201ENST00000337299 FKBP4Q02790 459 aaKnown RBP eCLIP15.27■□□□□ 0.04
COL2A1-201ENST00000337299 GDAP1L1Q96MZ0 367 aa15.27■□□□□ 0.04
COL2A1-201ENST00000337299 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.27■□□□□ 0.04
COL2A1-201ENST00000337299 GOLGA6L9A6NEM1 432 aa15.27■□□□□ 0.03
COL2A1-201ENST00000337299 NUP88Q99567 741 aaPredicted RBP15.26■□□□□ 0.03
COL2A1-201ENST00000337299 ZEB2O60315 1214 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms