RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 PUS3Q9BZE2 481 aaKnown RBP15.3■□□□□ 0.04
LIMK1-201ENST00000336180 ATG3Q9NT62 314 aa15.3■□□□□ 0.04
LIMK1-201ENST00000336180 AK9Q5TCS8 1911 aa15.29■□□□□ 0.04
LIMK1-201ENST00000336180 SCN11AQ9UI33 1791 aa15.29■□□□□ 0.04
LIMK1-201ENST00000336180 LRRC24Q50LG9 513 aa15.29■□□□□ 0.04
LIMK1-201ENST00000336180 PLBD2Q8NHP8 589 aa15.29■□□□□ 0.04
LIMK1-201ENST00000336180 SLC4A9Q96Q91 983 aa15.29■□□□□ 0.04
LIMK1-201ENST00000336180 PTPN12Q05209 780 aaKnown RBP15.29■□□□□ 0.04
LIMK1-201ENST00000336180 HLFQ16534 295 aa15.29■□□□□ 0.04
LIMK1-201ENST00000336180 DBNDD2Q9BQY9 259 aa15.29■□□□□ 0.04
LIMK1-201ENST00000336180 HSP90AB4PQ58FF6 505 aa15.28■□□□□ 0.04
LIMK1-201ENST00000336180 CACNA1FO60840 1977 aa15.28■□□□□ 0.04
LIMK1-201ENST00000336180 ERVV-2B6SEH9 535 aa15.28■□□□□ 0.04
LIMK1-201ENST00000336180 MTX1Q13505 466 aa15.28■□□□□ 0.04
LIMK1-201ENST00000336180 FSD1Q9BTV5 496 aa15.28■□□□□ 0.04
LIMK1-201ENST00000336180 SIPA1L3O60292 1781 aaPredicted RBP15.27■□□□□ 0.04
LIMK1-201ENST00000336180 CCDC129Q6ZRS4 1044 aa15.27■□□□□ 0.04
LIMK1-201ENST00000336180 DDX46Q7L014 1031 aaKnown RBP15.27■□□□□ 0.04
LIMK1-201ENST00000336180 GOLGB1Q14789 3259 aaKnown RBP15.27■□□□□ 0.04
LIMK1-201ENST00000336180 EXOC5O00471 708 aa15.27■□□□□ 0.03
LIMK1-201ENST00000336180 ST18O60284 1047 aa15.27■□□□□ 0.03
LIMK1-201ENST00000336180 GLRX3O76003 335 aaKnown RBP15.27■□□□□ 0.03
LIMK1-201ENST00000336180 KCNJ4P48050 445 aa15.27■□□□□ 0.03
LIMK1-201ENST00000336180 PRPF40BQ6NWY9 871 aaKnown RBP15.27■□□□□ 0.03
LIMK1-201ENST00000336180 SEC62Q99442 399 aaKnown RBP15.27■□□□□ 0.03
LIMK1-201ENST00000336180 DBNLQ9UJU6 430 aaKnown RBP15.27■□□□□ 0.03
LIMK1-201ENST00000336180 TAF6LQ9Y6J9 622 aa15.27■□□□□ 0.03
LIMK1-201ENST00000336180 NMIQ13287 307 aaPredicted RBP15.26■□□□□ 0.03
LIMK1-201ENST00000336180 CWC25Q9NXE8 425 aaPredicted RBP15.26■□□□□ 0.03
LIMK1-201ENST00000336180 ZBTB1Q9Y2K1 713 aa15.26■□□□□ 0.03
LIMK1-201ENST00000336180 CRYBG1Q9Y4K1 1723 aa15.26■□□□□ 0.03
LIMK1-201ENST00000336180 KIAA1211Q6ZU35 1233 aa15.26■□□□□ 0.03
LIMK1-201ENST00000336180 SNRKQ9NRH2 765 aa15.26■□□□□ 0.03
LIMK1-201ENST00000336180 A0A0D9SFI3 127 aa15.25■□□□□ 0.03
LIMK1-201ENST00000336180 SGSM2O43147 1006 aa15.25■□□□□ 0.03
LIMK1-201ENST00000336180 TMX3Q96JJ7 454 aa15.25■□□□□ 0.03
LIMK1-201ENST00000336180 TRAK2O60296 914 aa15.25■□□□□ 0.03
LIMK1-201ENST00000336180 RFX5P48382 616 aaPredicted RBP15.25■□□□□ 0.03
LIMK1-201ENST00000336180 ADCK5Q3MIX3 580 aa15.25■□□□□ 0.03
LIMK1-201ENST00000336180 NCLP19338 710 aaKnown RBP15.24■□□□□ 0.03
LIMK1-201ENST00000336180 FOXO4P98177 505 aa15.24■□□□□ 0.03
LIMK1-201ENST00000336180 HSP90AB3PQ58FF7 597 aa15.24■□□□□ 0.03
LIMK1-201ENST00000336180 KCNQ2O43526 872 aa15.24■□□□□ 0.03
LIMK1-201ENST00000336180 MCCP23508 829 aa15.24■□□□□ 0.03
LIMK1-201ENST00000336180 DDIT3P35638 169 aa15.24■□□□□ 0.03
LIMK1-201ENST00000336180 GPATCH3Q96I76 525 aa15.24■□□□□ 0.03
LIMK1-201ENST00000336180 UTYO14607 1347 aa15.24■□□□□ 0.03
LIMK1-201ENST00000336180 CASP7P55210 303 aa15.23■□□□□ 0.03
LIMK1-201ENST00000336180 TNNI3KQ59H18 835 aa15.23■□□□□ 0.03
LIMK1-201ENST00000336180 MCTP1Q6DN14 999 aa15.23■□□□□ 0.03
LIMK1-201ENST00000336180 ZNF589Q86UQ0 364 aaPredicted RBP15.23■□□□□ 0.03
LIMK1-201ENST00000336180 ERC1Q8IUD2 1116 aa15.23■□□□□ 0.03
LIMK1-201ENST00000336180 LSG1Q9H089 658 aaKnown RBP15.23■□□□□ 0.03
LIMK1-201ENST00000336180 FPGT-TNNI3KV9GXZ4 949 aa15.23■□□□□ 0.03
LIMK1-201ENST00000336180 PTF1AQ7RTS3 328 aa15.23■□□□□ 0.03
LIMK1-201ENST00000336180 SNX14Q9Y5W7 946 aa15.23■□□□□ 0.03
LIMK1-201ENST00000336180 NKX1-1Q15270 411 aaPredicted RBP15.22■□□□□ 0.03
LIMK1-201ENST00000336180 C8orf37Q96NL8 207 aa15.22■□□□□ 0.03
LIMK1-201ENST00000336180 SNAP23O00161 211 aa15.22■□□□□ 0.03
LIMK1-201ENST00000336180 PPFIA3O75145 1194 aa15.22■□□□□ 0.03
LIMK1-201ENST00000336180 CASTP20810 708 aaKnown RBP15.22■□□□□ 0.03
LIMK1-201ENST00000336180 RAB3GAP1Q15042 981 aa15.22■□□□□ 0.03
LIMK1-201ENST00000336180 PAXIP1Q6ZW49 1069 aaPredicted RBP15.22■□□□□ 0.03
LIMK1-201ENST00000336180 FAM98CQ17RN3 349 aaKnown RBP15.21■□□□□ 0.03
LIMK1-201ENST00000336180 TAF7LQ5H9L4 462 aa15.21■□□□□ 0.03
LIMK1-201ENST00000336180 JAKMIP1Q96N16 626 aaKnown RBP15.21■□□□□ 0.03
LIMK1-201ENST00000336180 EP400Q96L91 3159 aa15.21■□□□□ 0.03
LIMK1-201ENST00000336180 H7C1W4 665 aa15.21■□□□□ 0.02
LIMK1-201ENST00000336180 GOLIM4O00461 696 aa15.21■□□□□ 0.02
LIMK1-201ENST00000336180 PI16Q6UXB8 463 aa15.21■□□□□ 0.02
LIMK1-201ENST00000336180 KIF6Q6ZMV9 814 aa15.21■□□□□ 0.02
LIMK1-201ENST00000336180 HELBQ8NG08 1087 aaPredicted RBP15.21■□□□□ 0.02
LIMK1-201ENST00000336180 LARGE1O95461 756 aa15.2■□□□□ 0.02
LIMK1-201ENST00000336180 ADORA1P30542 326 aa15.2■□□□□ 0.02
LIMK1-201ENST00000336180 DDB1Q16531 1140 aa15.2■□□□□ 0.02
LIMK1-201ENST00000336180 GDPD2Q9HCC8 539 aa15.2■□□□□ 0.02
LIMK1-201ENST00000336180 TTC41PQ6P2S7 1318 aa15.2■□□□□ 0.02
LIMK1-201ENST00000336180 ADAMTS7Q9UKP4 1686 aa15.19■□□□□ 0.02
LIMK1-201ENST00000336180 HSPA4P34932 840 aa15.19■□□□□ 0.02
LIMK1-201ENST00000336180 DHX37Q8IY37 1157 aaKnown RBP15.19■□□□□ 0.02
LIMK1-201ENST00000336180 HDAC5Q9UQL6 1122 aa15.19■□□□□ 0.02
LIMK1-201ENST00000336180 KCPQ6ZWJ8 1503 aa15.19■□□□□ 0.02
LIMK1-201ENST00000336180 RAD50Q92878 1312 aa15.19■□□□□ 0.02
LIMK1-201ENST00000336180 A0A0G2JLW4 131 aa15.19■□□□□ 0.02
LIMK1-201ENST00000336180 STARD3NLO95772 234 aa15.19■□□□□ 0.02
LIMK1-201ENST00000336180 ATG9AQ7Z3C6 839 aa15.19■□□□□ 0.02
LIMK1-201ENST00000336180 NECAB1Q8N987 351 aa15.19■□□□□ 0.02
LIMK1-201ENST00000336180 EVI5LQ96CN4 794 aa15.19■□□□□ 0.02
LIMK1-201ENST00000336180 COPRSQ9NQ92 184 aa15.19■□□□□ 0.02
LIMK1-201ENST00000336180 TAOK2Q9UL54 1235 aa15.19■□□□□ 0.02
LIMK1-201ENST00000336180 ZDHHC9Q9Y397 364 aa15.19■□□□□ 0.02
LIMK1-201ENST00000336180 MRC1P22897 1456 aa15.19■□□□□ 0.02
LIMK1-201ENST00000336180 PKD1L3Q7Z443 1732 aa15.19■□□□□ 0.02
LIMK1-201ENST00000336180 FKBP4Q02790 459 aaKnown RBP eCLIP15.19■□□□□ 0.02
LIMK1-201ENST00000336180 MARCH10Q8NA82 808 aaPredicted RBP15.19■□□□□ 0.02
LIMK1-201ENST00000336180 RBM8AQ9Y5S9 174 aaKnown RBP15.19■□□□□ 0.02
LIMK1-201ENST00000336180 UBAP1LF5GYI3 381 aa15.18■□□□□ 0.02
LIMK1-201ENST00000336180 HCLS1P14317 486 aaPredicted RBP15.18■□□□□ 0.02
LIMK1-201ENST00000336180 AK2P54819 239 aa15.18■□□□□ 0.02
LIMK1-201ENST00000336180 TCIRG1Q13488 830 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms