RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 FMNL2Q96PY5 1086 aa21.3■■□□□ 1
LRCH3-201ENST00000334859 RBSNQ9H1K0 784 aa21.3■■□□□ 1
LRCH3-201ENST00000334859 BOLA2Q9H3K6 86 aa21.3■■□□□ 1
LRCH3-201ENST00000334859 GDPD2Q9HCC8 539 aa21.3■■□□□ 1
LRCH3-201ENST00000334859 MRC1P22897 1456 aa21.3■■□□□ 1
LRCH3-201ENST00000334859 ABCC6O95255 1503 aa21.29■■□□□ 1
LRCH3-201ENST00000334859 HIP1O00291 1037 aa21.29■■□□□ 1
LRCH3-201ENST00000334859 NMIQ13287 307 aaPredicted RBP21.29■■□□□ 1
LRCH3-201ENST00000334859 FSD1Q9BTV5 496 aa21.29■■□□□ 1
LRCH3-201ENST00000334859 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.29■■□□□ 1
LRCH3-201ENST00000334859 STRCP1A6NGW2 1772 aa21.29■■□□□ 1
LRCH3-201ENST00000334859 ADCK5Q3MIX3 580 aa21.29■■□□□ 1
LRCH3-201ENST00000334859 PPP1R9BQ96SB3 815 aa21.29■■□□□ 1
LRCH3-201ENST00000334859 ZKSCAN1P17029 563 aaPredicted RBP21.28■■□□□ 1
LRCH3-201ENST00000334859 CABP4P57796 275 aa21.28■■□□□ 1
LRCH3-201ENST00000334859 PDRG1Q9NUG6 133 aa21.28■■□□□ 1
LRCH3-201ENST00000334859 SMC3Q9UQE7 1217 aa21.28■■□□□ 1
LRCH3-201ENST00000334859 CYP46A1Q9Y6A2 500 aa21.28■■□□□ 1
LRCH3-201ENST00000334859 CADPS2Q86UW7 1296 aa21.27■■□□□ 1
LRCH3-201ENST00000334859 RBM8AQ9Y5S9 174 aaKnown RBP21.27■■□□□ 1
LRCH3-201ENST00000334859 LRSAM1Q6UWE0 723 aa21.27■■□□□ 1
LRCH3-201ENST00000334859 UBE3BQ7Z3V4 1068 aa21.27■■□□□ 1
LRCH3-201ENST00000334859 AFDNP55196 1824 aaKnown RBP21.27■■□□□ 1
LRCH3-201ENST00000334859 PKD1L3Q7Z443 1732 aa21.27■■□□□ 1
LRCH3-201ENST00000334859 LARGE1O95461 756 aa21.26■□□□□ 0.99
LRCH3-201ENST00000334859 VPS53Q5VIR6 699 aa21.26■□□□□ 0.99
LRCH3-201ENST00000334859 LRP10Q7Z4F1 713 aa21.26■□□□□ 0.99
LRCH3-201ENST00000334859 DDX54Q8TDD1 881 aaKnown RBP21.26■□□□□ 0.99
LRCH3-201ENST00000334859 A0A0D9SFI3 127 aa21.25■□□□□ 0.99
LRCH3-201ENST00000334859 CCDC83Q8IWF9 413 aa21.25■□□□□ 0.99
LRCH3-201ENST00000334859 ATP5J2-PTCD1G3V325 749 aa21.25■□□□□ 0.99
LRCH3-201ENST00000334859 STX6O43752 255 aa21.25■□□□□ 0.99
LRCH3-201ENST00000334859 PTCD1O75127 700 aaKnown RBP21.25■□□□□ 0.99
LRCH3-201ENST00000334859 ZSCAN22P10073 491 aaPredicted RBP21.25■□□□□ 0.99
LRCH3-201ENST00000334859 NECTIN1Q15223 517 aa21.25■□□□□ 0.99
LRCH3-201ENST00000334859 CREB3L3Q68CJ9 461 aa21.25■□□□□ 0.99
LRCH3-201ENST00000334859 SYAP1Q96A49 352 aaPredicted RBP21.25■□□□□ 0.99
LRCH3-201ENST00000334859 TM6SF1Q9BZW5 370 aa21.25■□□□□ 0.99
LRCH3-201ENST00000334859 ZSWIM6Q9HCJ5 1215 aa21.25■□□□□ 0.99
LRCH3-201ENST00000334859 SYT1P21579 422 aa21.24■□□□□ 0.99
LRCH3-201ENST00000334859 USP48Q86UV5 1035 aa21.24■□□□□ 0.99
LRCH3-201ENST00000334859 ARFGEF2Q9Y6D5 1785 aa21.24■□□□□ 0.99
LRCH3-201ENST00000334859 SPATA31A3Q5VYP0 1347 aa21.24■□□□□ 0.99
LRCH3-201ENST00000334859 GADD45BO75293 160 aaPredicted RBP21.24■□□□□ 0.99
LRCH3-201ENST00000334859 KCNB2Q92953 911 aa21.24■□□□□ 0.99
LRCH3-201ENST00000334859 COPRSQ9NQ92 184 aa21.23■□□□□ 0.99
LRCH3-201ENST00000334859 TCHHQ07283 1943 aa21.23■□□□□ 0.99
LRCH3-201ENST00000334859 PLEKHG2Q9H7P9 1386 aa21.23■□□□□ 0.99
LRCH3-201ENST00000334859 A0A087WZG4 1122 aa21.22■□□□□ 0.99
LRCH3-201ENST00000334859 MAP4K1Q92918 833 aa21.22■□□□□ 0.99
LRCH3-201ENST00000334859 SH2B1Q9NRF2 756 aaPredicted RBP21.22■□□□□ 0.99
LRCH3-201ENST00000334859 CNPY2Q9Y2B0 182 aa21.22■□□□□ 0.99
LRCH3-201ENST00000334859 DTNBO60941 627 aa21.21■□□□□ 0.99
LRCH3-201ENST00000334859 GJB2P29033 226 aa21.21■□□□□ 0.99
LRCH3-201ENST00000334859 TFCP2Q12800 502 aa21.21■□□□□ 0.99
LRCH3-201ENST00000334859 EDC3Q96F86 508 aaKnown RBP21.21■□□□□ 0.99
LRCH3-201ENST00000334859 ZSCAN31Q96LW9 406 aaPredicted RBP21.21■□□□□ 0.99
LRCH3-201ENST00000334859 CPDO75976 1380 aa21.21■□□□□ 0.99
LRCH3-201ENST00000334859 LAMB4A4D0S4 1761 aa21.21■□□□□ 0.99
LRCH3-201ENST00000334859 SLC27A2O14975 620 aa21.21■□□□□ 0.99
LRCH3-201ENST00000334859 PTPN12Q05209 780 aaKnown RBP21.21■□□□□ 0.99
LRCH3-201ENST00000334859 TPRNQ4KMQ1 711 aa21.21■□□□□ 0.99
LRCH3-201ENST00000334859 DBNLQ9UJU6 430 aaKnown RBP21.21■□□□□ 0.99
LRCH3-201ENST00000334859 MED23Q9ULK4 1368 aa21.2■□□□□ 0.98
LRCH3-201ENST00000334859 TNNI3KQ59H18 835 aa21.2■□□□□ 0.98
LRCH3-201ENST00000334859 RNF20Q5VTR2 975 aa21.2■□□□□ 0.98
LRCH3-201ENST00000334859 FPGT-TNNI3KV9GXZ4 949 aa21.2■□□□□ 0.98
LRCH3-201ENST00000334859 F13A1P00488 732 aa21.2■□□□□ 0.98
LRCH3-201ENST00000334859 RFX5P48382 616 aaPredicted RBP21.2■□□□□ 0.98
LRCH3-201ENST00000334859 RNF214Q8ND24 703 aa21.2■□□□□ 0.98
LRCH3-201ENST00000334859 GLI3P10071 1580 aa21.19■□□□□ 0.98
LRCH3-201ENST00000334859 PHF14O94880 888 aa21.19■□□□□ 0.98
LRCH3-201ENST00000334859 PSMA5P28066 241 aa21.19■□□□□ 0.98
LRCH3-201ENST00000334859 ZNF589Q86UQ0 364 aaPredicted RBP21.19■□□□□ 0.98
LRCH3-201ENST00000334859 PLBD2Q8NHP8 589 aa21.19■□□□□ 0.98
LRCH3-201ENST00000334859 NAP1L5Q96NT1 182 aaPredicted RBP21.19■□□□□ 0.98
LRCH3-201ENST00000334859 SNRKQ9NRH2 765 aa21.19■□□□□ 0.98
LRCH3-201ENST00000334859 ATP6V1DQ9Y5K8 247 aa21.19■□□□□ 0.98
LRCH3-201ENST00000334859 PARP4Q9UKK3 1724 aaKnown RBP21.19■□□□□ 0.98
LRCH3-201ENST00000334859 ME3Q16798 604 aa21.18■□□□□ 0.98
LRCH3-201ENST00000334859 RABL6Q3YEC7 729 aaPredicted RBP21.18■□□□□ 0.98
LRCH3-201ENST00000334859 NECAB1Q8N987 351 aa21.18■□□□□ 0.98
LRCH3-201ENST00000334859 CHMP3Q9Y3E7 222 aa21.18■□□□□ 0.98
LRCH3-201ENST00000334859 TMEM87AQ8NBN3 555 aa21.18■□□□□ 0.98
LRCH3-201ENST00000334859 DNAJC5Q9H3Z4 198 aa21.18■□□□□ 0.98
LRCH3-201ENST00000334859 TSPY26PQ9H489 355 aa21.18■□□□□ 0.98
LRCH3-201ENST00000334859 PRDM11Q9NQV5 511 aa21.18■□□□□ 0.98
LRCH3-201ENST00000334859 FIBPO43427 364 aa21.17■□□□□ 0.98
LRCH3-201ENST00000334859 ZSCAN30Q86W11 494 aa21.17■□□□□ 0.98
LRCH3-201ENST00000334859 DNAJC2Q99543 621 aaKnown RBP21.17■□□□□ 0.98
LRCH3-201ENST00000334859 NDUFB9Q9Y6M9 179 aa21.17■□□□□ 0.98
LRCH3-201ENST00000334859 VPS37CA5D8V6 355 aaPredicted RBP21.17■□□□□ 0.98
LRCH3-201ENST00000334859 ATP5JP18859 108 aa21.17■□□□□ 0.98
LRCH3-201ENST00000334859 BLOC1S2Q6QNY1 142 aa21.17■□□□□ 0.98
LRCH3-201ENST00000334859 TOM1L2Q6ZVM7 507 aa21.17■□□□□ 0.98
LRCH3-201ENST00000334859 TCEANC2Q96MN5 208 aa21.17■□□□□ 0.98
LRCH3-201ENST00000334859 TPCN1Q9ULQ1 816 aa21.17■□□□□ 0.98
LRCH3-201ENST00000334859 PCDH11XQ9BZA7 1347 aa21.17■□□□□ 0.98
LRCH3-201ENST00000334859 PCDH11YQ9BZA8 1340 aa21.17■□□□□ 0.98
LRCH3-201ENST00000334859 ST3GAL1Q11201 340 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms