RNA–Protein interactions for RNA: ENST00000334731.6

C9orf85-201, Transcript of chromosome 9 open reading frame 85, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf85, Length 1,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-201ENST00000334731 KDM2BQ8NHM5 1336 aa14.64□□□□□ -0.07
C9orf85-201ENST00000334731 DLEC1Q9Y238 1755 aa14.63□□□□□ -0.07
C9orf85-201ENST00000334731 ZNF853P0CG23 659 aa14.63□□□□□ -0.07
C9orf85-201ENST00000334731 ERFEQ4G0M1 354 aa14.63□□□□□ -0.07
C9orf85-201ENST00000334731 COPS6Q7L5N1 327 aa14.63□□□□□ -0.07
C9orf85-201ENST00000334731 ZC3H4Q9UPT8 1303 aaKnown RBP14.63□□□□□ -0.07
C9orf85-201ENST00000334731 TOMM70O94826 608 aa14.62□□□□□ -0.07
C9orf85-201ENST00000334731 SOGA3Q5TF21 947 aa14.62□□□□□ -0.07
C9orf85-201ENST00000334731 RRAGCQ9HB90 399 aa14.62□□□□□ -0.07
C9orf85-201ENST00000334731 DDX21Q9NR30 783 aaKnown RBP eCLIP14.62□□□□□ -0.07
C9orf85-201ENST00000334731 COL11A2P13942 1736 aaPredicted RBP14.61□□□□□ -0.07
C9orf85-201ENST00000334731 HOXB7P09629 217 aa14.61□□□□□ -0.07
C9orf85-201ENST00000334731 ALDH1B1P30837 517 aa14.61□□□□□ -0.07
C9orf85-201ENST00000334731 AIMP1Q12904 312 aaKnown RBP14.61□□□□□ -0.07
C9orf85-201ENST00000334731 CRY2Q49AN0 593 aa14.61□□□□□ -0.07
C9orf85-201ENST00000334731 XAGE3Q8WTP9 111 aa14.61□□□□□ -0.07
C9orf85-201ENST00000334731 TAOK3Q9H2K8 898 aa14.61□□□□□ -0.07
C9orf85-201ENST00000334731 MBIPQ9NS73 344 aa14.61□□□□□ -0.07
C9orf85-201ENST00000334731 LTBP3Q9NS15 1303 aa14.61□□□□□ -0.07
C9orf85-201ENST00000334731 ABCC12Q96J65 1359 aa14.6□□□□□ -0.07
C9orf85-201ENST00000334731 IBTKQ9P2D0 1353 aaPredicted RBP14.6□□□□□ -0.07
C9orf85-201ENST00000334731 GLTPD2A6NH11 291 aa14.6□□□□□ -0.07
C9orf85-201ENST00000334731 NTSR2O95665 410 aa14.6□□□□□ -0.07
C9orf85-201ENST00000334731 HSPA6P17066 643 aa14.6□□□□□ -0.07
C9orf85-201ENST00000334731 PARP10Q53GL7 1025 aa14.6□□□□□ -0.07
C9orf85-201ENST00000334731 DUSP27Q5VZP5 1158 aa14.6□□□□□ -0.07
C9orf85-201ENST00000334731 PPP1R42Q7Z4L9 355 aa14.6□□□□□ -0.07
C9orf85-201ENST00000334731 IFT57Q9NWB7 429 aa14.6□□□□□ -0.07
C9orf85-201ENST00000334731 CHPF2Q9P2E5 772 aa14.6□□□□□ -0.07
C9orf85-201ENST00000334731 CALD1Q05682 793 aaKnown RBP14.59□□□□□ -0.07
C9orf85-201ENST00000334731 HDGFL1Q5TGJ6 251 aa14.59□□□□□ -0.07
C9orf85-201ENST00000334731 OLFM4Q6UX06 510 aa14.59□□□□□ -0.07
C9orf85-201ENST00000334731 HOXA10P31260 410 aaPredicted RBP14.58□□□□□ -0.08
C9orf85-201ENST00000334731 GNAI1P63096 354 aa14.58□□□□□ -0.08
C9orf85-201ENST00000334731 CCDC93Q567U6 631 aa14.58□□□□□ -0.08
C9orf85-201ENST00000334731 HSP90AB3PQ58FF7 597 aa14.58□□□□□ -0.08
C9orf85-201ENST00000334731 SLC10A5Q5PT55 438 aa14.58□□□□□ -0.08
C9orf85-201ENST00000334731 RBM46Q8TBY0 533 aaKnown RBP14.58□□□□□ -0.08
C9orf85-201ENST00000334731 UTP14AQ9BVJ6 771 aaKnown RBP14.58□□□□□ -0.08
C9orf85-201ENST00000334731 DBF4Q9UBU7 674 aaPredicted RBP14.58□□□□□ -0.08
C9orf85-201ENST00000334731 CLEC11AQ9Y240 323 aa14.58□□□□□ -0.08
C9orf85-201ENST00000334731 SLX4Q8IY92 1834 aa14.57□□□□□ -0.08
C9orf85-201ENST00000334731 SBF1O95248 1867 aa14.57□□□□□ -0.08
C9orf85-201ENST00000334731 TCIRG1Q13488 830 aa14.57□□□□□ -0.08
C9orf85-201ENST00000334731 DPY19L2Q6NUT2 758 aa14.57□□□□□ -0.08
C9orf85-201ENST00000334731 C3orf67Q6ZVT6 689 aa14.57□□□□□ -0.08
C9orf85-201ENST00000334731 NLRP10Q86W26 655 aa14.57□□□□□ -0.08
C9orf85-201ENST00000334731 C16orf71Q8IYS4 520 aaPredicted RBP14.57□□□□□ -0.08
C9orf85-201ENST00000334731 RTKN2Q8IZC4 609 aa14.57□□□□□ -0.08
C9orf85-201ENST00000334731 ANP32CO43423 234 aa14.56□□□□□ -0.08
C9orf85-201ENST00000334731 VEGFAP15692 232 aaPredicted RBP14.56□□□□□ -0.08
C9orf85-201ENST00000334731 FKBP4Q02790 459 aaKnown RBP eCLIP14.56□□□□□ -0.08
C9orf85-201ENST00000334731 ANKRD13DQ6ZTN6 518 aa14.56□□□□□ -0.08
C9orf85-201ENST00000334731 PLBD2Q8NHP8 589 aa14.56□□□□□ -0.08
C9orf85-201ENST00000334731 RPGRQ92834 1020 aaKnown RBP14.56□□□□□ -0.08
C9orf85-201ENST00000334731 NLRP3Q96P20 1036 aa14.56□□□□□ -0.08
C9orf85-201ENST00000334731 CRAMP1Q96RY5 1269 aa14.56□□□□□ -0.08
C9orf85-201ENST00000334731 RIC1Q4ADV7 1423 aa14.56□□□□□ -0.08
C9orf85-201ENST00000334731 POTECB2RU33 542 aa14.55□□□□□ -0.08
C9orf85-201ENST00000334731 ELL2O00472 640 aaPredicted RBP14.55□□□□□ -0.08
C9orf85-201ENST00000334731 RBM17Q96I25 401 aaKnown RBP14.55□□□□□ -0.08
C9orf85-201ENST00000334731 MRS2Q9HD23 443 aa14.55□□□□□ -0.08
C9orf85-201ENST00000334731 ZNF277Q9NRM2 450 aaPredicted RBP14.55□□□□□ -0.08
C9orf85-201ENST00000334731 HYPKQ9NX55 129 aa14.55□□□□□ -0.08
C9orf85-201ENST00000334731 NUP98P52948 1817 aa14.55□□□□□ -0.08
C9orf85-201ENST00000334731 FSTL1Q12841 308 aa14.54□□□□□ -0.08
C9orf85-201ENST00000334731 CCDC27Q2M243 656 aa14.54□□□□□ -0.08
C9orf85-201ENST00000334731 SYNE4Q8N205 404 aa14.54□□□□□ -0.08
C9orf85-201ENST00000334731 C8orf58Q8NAV2 365 aa14.54□□□□□ -0.08
C9orf85-201ENST00000334731 TRMT112Q9UI30 125 aaKnown RBP14.54□□□□□ -0.08
C9orf85-201ENST00000334731 RNF123Q5XPI4 1314 aa14.54□□□□□ -0.08
C9orf85-201ENST00000334731 FER1L6Q2WGJ9 1857 aa14.53□□□□□ -0.08
C9orf85-201ENST00000334731 TNRC6CQ9HCJ0 1690 aaKnown RBP14.53□□□□□ -0.08
C9orf85-201ENST00000334731 HCLS1P14317 486 aaPredicted RBP14.53□□□□□ -0.08
C9orf85-201ENST00000334731 CC2D2BQ6DHV5 1058 aa14.53□□□□□ -0.08
C9orf85-201ENST00000334731 WWC1Q8IX03 1113 aa14.53□□□□□ -0.08
C9orf85-201ENST00000334731 ISCA1Q9BUE6 129 aa14.53□□□□□ -0.08
C9orf85-201ENST00000334731 DDNO94850 711 aaPredicted RBP14.52□□□□□ -0.09
C9orf85-201ENST00000334731 APLP1P51693 650 aa14.52□□□□□ -0.09
C9orf85-201ENST00000334731 PSMD1Q99460 953 aa14.52□□□□□ -0.09
C9orf85-201ENST00000334731 SNED1Q8TER0 1413 aa14.51□□□□□ -0.09
C9orf85-201ENST00000334731 SH3TC1Q8TE82 1336 aa14.51□□□□□ -0.09
C9orf85-201ENST00000334731 ATP5J2-PTCD1G3V325 749 aa14.51□□□□□ -0.09
C9orf85-201ENST00000334731 TCERG1O14776 1098 aaKnown RBP14.51□□□□□ -0.09
C9orf85-201ENST00000334731 IARSP41252 1262 aaKnown RBP14.51□□□□□ -0.09
C9orf85-201ENST00000334731 GRIPAP1Q4V328 841 aa14.51□□□□□ -0.09
C9orf85-201ENST00000334731 SLC51AQ86UW1 340 aa14.51□□□□□ -0.09
C9orf85-201ENST00000334731 TSPYL6Q8N831 410 aa14.51□□□□□ -0.09
C9orf85-201ENST00000334731 SMC1BQ8NDV3 1235 aa14.51□□□□□ -0.09
C9orf85-201ENST00000334731 ZNF428Q96B54 188 aa14.51□□□□□ -0.09
C9orf85-201ENST00000334731 PHAXQ9H814 394 aaKnown RBP14.51□□□□□ -0.09
C9orf85-201ENST00000334731 ARFGEF2Q9Y6D5 1785 aa14.5□□□□□ -0.09
C9orf85-201ENST00000334731 PPEF1O14829 653 aaPredicted RBP14.5□□□□□ -0.09
C9orf85-201ENST00000334731 PRKAR2AP13861 404 aaKnown RBP14.5□□□□□ -0.09
C9orf85-201ENST00000334731 TRIM28Q13263 835 aaKnown RBP14.5□□□□□ -0.09
C9orf85-201ENST00000334731 TSR2Q969E8 191 aaKnown RBP14.5□□□□□ -0.09
C9orf85-201ENST00000334731 BBOX1O75936 387 aa14.49□□□□□ -0.09
C9orf85-201ENST00000334731 CCDC30Q5VVM6 783 aa14.49□□□□□ -0.09
C9orf85-201ENST00000334731 RIC3Q7Z5B4 369 aa14.49□□□□□ -0.09
C9orf85-201ENST00000334731 FAM89AQ96GI7 184 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms