RNA–Protein interactions for RNA: ENST00000333254.3

CCDC172-201, Transcript of coiled-coil domain containing 172, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC172, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172-201ENST00000333254 CWC27Q6UX04 472 aaKnown RBP12.93□□□□□ -0.34
CCDC172-201ENST00000333254 RASEFQ8IZ41 740 aa12.93□□□□□ -0.34
CCDC172-201ENST00000333254 MAP4K1Q92918 833 aa12.93□□□□□ -0.34
CCDC172-201ENST00000333254 FMNL2Q96PY5 1086 aa12.93□□□□□ -0.34
CCDC172-201ENST00000333254 ARXQ96QS3 562 aa12.93□□□□□ -0.34
CCDC172-201ENST00000333254 NLRP2Q9NX02 1062 aa12.93□□□□□ -0.34
CCDC172-201ENST00000333254 ATP6V1DQ9Y5K8 247 aa12.93□□□□□ -0.34
CCDC172-201ENST00000333254 PHF14O94880 888 aa12.92□□□□□ -0.34
CCDC172-201ENST00000333254 MAP4K4O95819 1239 aaPredicted RBP12.92□□□□□ -0.34
CCDC172-201ENST00000333254 ZC3H6P61129 1189 aaKnown RBP12.92□□□□□ -0.34
CCDC172-201ENST00000333254 TSGA10IPQ3SY00 556 aa12.92□□□□□ -0.34
CCDC172-201ENST00000333254 RUFY3Q7L099 469 aa12.92□□□□□ -0.34
CCDC172-201ENST00000333254 XAGE3Q8WTP9 111 aa12.92□□□□□ -0.34
CCDC172-201ENST00000333254 EAF2Q96CJ1 260 aaPredicted RBP12.92□□□□□ -0.34
CCDC172-201ENST00000333254 ZNF496Q96IT1 587 aaPredicted RBP12.92□□□□□ -0.34
CCDC172-201ENST00000333254 PA2G4Q9UQ80 394 aaKnown RBP12.92□□□□□ -0.34
CCDC172-201ENST00000333254 ZKSCAN1P17029 563 aaPredicted RBP12.91□□□□□ -0.34
CCDC172-201ENST00000333254 ANKRD13DQ6ZTN6 518 aa12.91□□□□□ -0.34
CCDC172-201ENST00000333254 TTC5Q8N0Z6 440 aa12.91□□□□□ -0.34
CCDC172-201ENST00000333254 HMG20BQ9P0W2 317 aa12.91□□□□□ -0.34
CCDC172-201ENST00000333254 TMEM63CQ9P1W3 806 aa12.91□□□□□ -0.34
CCDC172-201ENST00000333254 CYP27B1O15528 508 aa12.9□□□□□ -0.34
CCDC172-201ENST00000333254 ZSCAN22P10073 491 aaPredicted RBP12.9□□□□□ -0.34
CCDC172-201ENST00000333254 PSMA5P28066 241 aa12.9□□□□□ -0.34
CCDC172-201ENST00000333254 RFX5P48382 616 aaPredicted RBP12.9□□□□□ -0.34
CCDC172-201ENST00000333254 COPS6Q7L5N1 327 aa12.9□□□□□ -0.34
CCDC172-201ENST00000333254 NFATC2IPQ8NCF5 419 aa12.9□□□□□ -0.34
CCDC172-201ENST00000333254 CYP46A1Q9Y6A2 500 aa12.9□□□□□ -0.34
CCDC172-201ENST00000333254 KCPQ6ZWJ8 1503 aa12.9□□□□□ -0.34
CCDC172-201ENST00000333254 ATP5JP18859 108 aa12.89□□□□□ -0.35
CCDC172-201ENST00000333254 NCLP19338 710 aaKnown RBP12.89□□□□□ -0.35
CCDC172-201ENST00000333254 PTH1RQ03431 593 aa12.89□□□□□ -0.35
CCDC172-201ENST00000333254 RNF20Q5VTR2 975 aa12.89□□□□□ -0.35
CCDC172-201ENST00000333254 STX6O43752 255 aa12.89□□□□□ -0.35
CCDC172-201ENST00000333254 CASTP20810 708 aaKnown RBP12.89□□□□□ -0.35
CCDC172-201ENST00000333254 PRIM1P49642 420 aaKnown RBP12.89□□□□□ -0.35
CCDC172-201ENST00000333254 SLC39A6Q13433 755 aa12.89□□□□□ -0.35
CCDC172-201ENST00000333254 ANKRD1Q15327 319 aa12.89□□□□□ -0.35
CCDC172-201ENST00000333254 CSPP1Q1MSJ5 1256 aa12.89□□□□□ -0.35
CCDC172-201ENST00000333254 PLBD2Q8NHP8 589 aa12.89□□□□□ -0.35
CCDC172-201ENST00000333254 SMC3Q9UQE7 1217 aa12.89□□□□□ -0.35
CCDC172-201ENST00000333254 TNS2Q63HR2 1409 aa12.89□□□□□ -0.35
CCDC172-201ENST00000333254 LAMA4Q16363 1823 aa12.88□□□□□ -0.35
CCDC172-201ENST00000333254 LETM1O95202 739 aaPredicted RBP12.88□□□□□ -0.35
CCDC172-201ENST00000333254 CASP7P55210 303 aa12.88□□□□□ -0.35
CCDC172-201ENST00000333254 AIMP1Q12904 312 aaKnown RBP12.88□□□□□ -0.35
CCDC172-201ENST00000333254 NMIQ13287 307 aaPredicted RBP12.88□□□□□ -0.35
CCDC172-201ENST00000333254 USPL1Q5W0Q7 1092 aa12.88□□□□□ -0.35
CCDC172-201ENST00000333254 CREB3L3Q68CJ9 461 aa12.88□□□□□ -0.35
CCDC172-201ENST00000333254 MYD88Q99836 296 aa12.88□□□□□ -0.35
CCDC172-201ENST00000333254 RBSNQ9H1K0 784 aa12.88□□□□□ -0.35
CCDC172-201ENST00000333254 GPR108Q9NPR9 543 aa12.88□□□□□ -0.35
CCDC172-201ENST00000333254 PDRG1Q9NUG6 133 aa12.88□□□□□ -0.35
CCDC172-201ENST00000333254 RBM8AQ9Y5S9 174 aaKnown RBP12.88□□□□□ -0.35
CCDC172-201ENST00000333254 PCDH11XQ9BZA7 1347 aa12.88□□□□□ -0.35
CCDC172-201ENST00000333254 PCDH11YQ9BZA8 1340 aa12.88□□□□□ -0.35
CCDC172-201ENST00000333254 F13A1P00488 732 aa12.87□□□□□ -0.35
CCDC172-201ENST00000333254 SYT1P21579 422 aa12.87□□□□□ -0.35
CCDC172-201ENST00000333254 NKX1-1Q15270 411 aaPredicted RBP12.87□□□□□ -0.35
CCDC172-201ENST00000333254 ZSCAN30Q86W11 494 aa12.87□□□□□ -0.35
CCDC172-201ENST00000333254 FAM184AQ8NB25 1140 aa12.87□□□□□ -0.35
CCDC172-201ENST00000333254 JAKMIP1Q96N16 626 aaKnown RBP12.87□□□□□ -0.35
CCDC172-201ENST00000333254 MYH15Q9Y2K3 1946 aa12.87□□□□□ -0.35
CCDC172-201ENST00000333254 WDR17Q8IZU2 1322 aa12.87□□□□□ -0.35
CCDC172-201ENST00000333254 NHSL1Q5SYE7 1610 aa12.86□□□□□ -0.35
CCDC172-201ENST00000333254 ERVV-2B6SEH9 535 aa12.86□□□□□ -0.35
CCDC172-201ENST00000333254 CSB-PGBD3P0DP91 1061 aa12.86□□□□□ -0.35
CCDC172-201ENST00000333254 PTPN12Q05209 780 aaKnown RBP12.86□□□□□ -0.35
CCDC172-201ENST00000333254 KRT32Q14532 448 aa12.86□□□□□ -0.35
CCDC172-201ENST00000333254 EPHA10Q5JZY3 1008 aa12.86□□□□□ -0.35
CCDC172-201ENST00000333254 PRPF40BQ6NWY9 871 aaKnown RBP12.86□□□□□ -0.35
CCDC172-201ENST00000333254 NOL8Q76FK4 1167 aaKnown RBP12.86□□□□□ -0.35
CCDC172-201ENST00000333254 RBM27Q9P2N5 1060 aaKnown RBP12.86□□□□□ -0.35
CCDC172-201ENST00000333254 COL5A2P05997 1499 aaPredicted RBP12.86□□□□□ -0.35
CCDC172-201ENST00000333254 SLC27A2O14975 620 aa12.86□□□□□ -0.35
CCDC172-201ENST00000333254 MYL6BP14649 208 aa12.86□□□□□ -0.35
CCDC172-201ENST00000333254 MCM5P33992 734 aa12.86□□□□□ -0.35
CCDC172-201ENST00000333254 CABP4P57796 275 aa12.86□□□□□ -0.35
CCDC172-201ENST00000333254 UBE2HP62256 183 aa12.86□□□□□ -0.35
CCDC172-201ENST00000333254 UVSSAQ2YD98 709 aa12.86□□□□□ -0.35
CCDC172-201ENST00000333254 TNNI3KQ59H18 835 aa12.86□□□□□ -0.35
CCDC172-201ENST00000333254 FSD1Q9BTV5 496 aa12.86□□□□□ -0.35
CCDC172-201ENST00000333254 CCDC8Q9H0W5 538 aaPredicted RBP12.86□□□□□ -0.35
CCDC172-201ENST00000333254 NSFL1CQ9UNZ2 370 aaKnown RBP12.86□□□□□ -0.35
CCDC172-201ENST00000333254 USP16Q9Y5T5 823 aa12.86□□□□□ -0.35
CCDC172-201ENST00000333254 FPGT-TNNI3KV9GXZ4 949 aa12.86□□□□□ -0.35
CCDC172-201ENST00000333254 TOGARAM1Q9Y4F4 1720 aa12.86□□□□□ -0.35
CCDC172-201ENST00000333254 PALLDQ8WX93 1383 aa12.85□□□□□ -0.35
CCDC172-201ENST00000333254 SYCE3A1L190 88 aa12.85□□□□□ -0.35
CCDC172-201ENST00000333254 H7C1W4 665 aa12.85□□□□□ -0.35
CCDC172-201ENST00000333254 PDCP20941 246 aa12.85□□□□□ -0.35
CCDC172-201ENST00000333254 ADCK5Q3MIX3 580 aa12.85□□□□□ -0.35
CCDC172-201ENST00000333254 USP48Q86UV5 1035 aa12.85□□□□□ -0.35
CCDC172-201ENST00000333254 FAM227BQ96M60 508 aa12.85□□□□□ -0.35
CCDC172-201ENST00000333254 TSPY26PQ9H489 355 aa12.85□□□□□ -0.35
CCDC172-201ENST00000333254 ATG3Q9NT62 314 aa12.85□□□□□ -0.35
CCDC172-201ENST00000333254 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.85□□□□□ -0.35
CCDC172-201ENST00000333254 A0A0D9SFI3 127 aa12.84□□□□□ -0.35
CCDC172-201ENST00000333254 CCDC183Q5T5S1 534 aa12.84□□□□□ -0.35
CCDC172-201ENST00000333254 TLR7Q9NYK1 1049 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms