RNA–Protein interactions for RNA: ENST00000333229.6

BRWD1-201, Transcript of bromodomain and WD repeat domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRWD1, Length 10,141 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRWD1-201ENST00000333229 ZEB2O60315 1214 aa15.24■□□□□ 0.03
BRWD1-201ENST00000333229 CCDC88BA6NC98 1476 aa15.24■□□□□ 0.03
BRWD1-201ENST00000333229 INPP5BP32019 993 aa15.24■□□□□ 0.03
BRWD1-201ENST00000333229 SEC62Q99442 399 aaKnown RBP15.23■□□□□ 0.03
BRWD1-201ENST00000333229 TMX1Q9H3N1 280 aa15.23■□□□□ 0.03
BRWD1-201ENST00000333229 PRKAR2BP31323 418 aa15.23■□□□□ 0.03
BRWD1-201ENST00000333229 TRPC3Q13507 836 aa15.23■□□□□ 0.03
BRWD1-201ENST00000333229 TMEM132EQ6IEE7 984 aa15.23■□□□□ 0.03
BRWD1-201ENST00000333229 JAKMIP1Q96N16 626 aaKnown RBP15.23■□□□□ 0.03
BRWD1-201ENST00000333229 ERCC6LQ2NKX8 1250 aa15.23■□□□□ 0.03
BRWD1-201ENST00000333229 ZNF530Q6P9A1 599 aaPredicted RBP15.23■□□□□ 0.03
BRWD1-201ENST00000333229 STX1AQ16623 288 aa15.23■□□□□ 0.03
BRWD1-201ENST00000333229 TPX2Q9ULW0 747 aaKnown RBP15.23■□□□□ 0.03
BRWD1-201ENST00000333229 PDRG1Q9NUG6 133 aa15.23■□□□□ 0.03
BRWD1-201ENST00000333229 USP6NLQ92738 828 aa15.23■□□□□ 0.03
BRWD1-201ENST00000333229 ZSCAN31Q96LW9 406 aaPredicted RBP15.23■□□□□ 0.03
BRWD1-201ENST00000333229 MRPS9P82933 396 aaKnown RBP15.22■□□□□ 0.03
BRWD1-201ENST00000333229 CFAP157Q5JU67 520 aa15.22■□□□□ 0.03
BRWD1-201ENST00000333229 TSR2Q969E8 191 aaKnown RBP15.22■□□□□ 0.03
BRWD1-201ENST00000333229 SELENOSQ9BQE4 189 aa15.22■□□□□ 0.03
BRWD1-201ENST00000333229 PDZRN3Q9UPQ7 1066 aa15.22■□□□□ 0.03
BRWD1-201ENST00000333229 CTAGE9A4FU28 777 aa15.22■□□□□ 0.03
BRWD1-201ENST00000333229 ARFGAP2Q8N6H7 521 aa15.22■□□□□ 0.03
BRWD1-201ENST00000333229 CCDC40Q4G0X9 1142 aa15.22■□□□□ 0.03
BRWD1-201ENST00000333229 CTAGE15A4D2H0 777 aa15.22■□□□□ 0.03
BRWD1-201ENST00000333229 CTAGE8P0CG41 777 aa15.22■□□□□ 0.03
BRWD1-201ENST00000333229 CTAGE4Q8IX94 777 aa15.22■□□□□ 0.03
BRWD1-201ENST00000333229 RRBP1Q9P2E9 1410 aaKnown RBP15.22■□□□□ 0.03
BRWD1-201ENST00000333229 CLCN1P35523 988 aa15.22■□□□□ 0.03
BRWD1-201ENST00000333229 CRACR2BQ8N4Y2 399 aaPredicted RBP15.22■□□□□ 0.03
BRWD1-201ENST00000333229 ADCY5O95622 1261 aa15.22■□□□□ 0.03
BRWD1-201ENST00000333229 CWC27Q6UX04 472 aaKnown RBP15.21■□□□□ 0.03
BRWD1-201ENST00000333229 FERMT2Q96AC1 680 aa15.21■□□□□ 0.03
BRWD1-201ENST00000333229 ARL1P40616 181 aaPredicted RBP15.21■□□□□ 0.03
BRWD1-201ENST00000333229 GNG11P61952 73 aa15.21■□□□□ 0.03
BRWD1-201ENST00000333229 ZSCAN25Q6NSZ9 544 aa15.21■□□□□ 0.03
BRWD1-201ENST00000333229 ARHGAP24Q8N264 748 aa15.21■□□□□ 0.03
BRWD1-201ENST00000333229 SELENOOQ9BVL4 669 aa15.21■□□□□ 0.03
BRWD1-201ENST00000333229 FAF1Q9UNN5 650 aaPredicted RBP15.21■□□□□ 0.03
BRWD1-201ENST00000333229 ATP2A1O14983 1001 aa15.21■□□□□ 0.03
BRWD1-201ENST00000333229 IDH1O75874 414 aaKnown RBP15.21■□□□□ 0.03
BRWD1-201ENST00000333229 TDRD12Q587J7 1177 aaKnown RBP15.21■□□□□ 0.03
BRWD1-201ENST00000333229 DACT3Q96B18 629 aaPredicted RBP15.21■□□□□ 0.03
BRWD1-201ENST00000333229 SLC4A2P04920 1241 aa15.21■□□□□ 0.02
BRWD1-201ENST00000333229 RNF10Q8N5U6 811 aaKnown RBP15.21■□□□□ 0.02
BRWD1-201ENST00000333229 BCAR3O75815 825 aa15.21■□□□□ 0.02
BRWD1-201ENST00000333229 RLBP1P12271 317 aa15.21■□□□□ 0.02
BRWD1-201ENST00000333229 CALCOCO2Q13137 446 aa15.21■□□□□ 0.02
BRWD1-201ENST00000333229 HDXQ7Z353 690 aa15.21■□□□□ 0.02
BRWD1-201ENST00000333229 ANKRD24Q8TF21 1146 aa15.2■□□□□ 0.02
BRWD1-201ENST00000333229 POLR3DP05423 398 aaPredicted RBP15.2■□□□□ 0.02
BRWD1-201ENST00000333229 TMC6Q7Z403 805 aa15.2■□□□□ 0.02
BRWD1-201ENST00000333229 PROSER2Q86WR7 435 aaPredicted RBP15.2■□□□□ 0.02
BRWD1-201ENST00000333229 ARHGAP5Q13017 1502 aa15.2■□□□□ 0.02
BRWD1-201ENST00000333229 CETN3O15182 167 aa15.2■□□□□ 0.02
BRWD1-201ENST00000333229 SCAND2PQ9GZW5 306 aaPredicted RBP15.2■□□□□ 0.02
BRWD1-201ENST00000333229 CXorf38Q8TB03 319 aa15.2■□□□□ 0.02
BRWD1-201ENST00000333229 CASTP20810 708 aaKnown RBP15.2■□□□□ 0.02
BRWD1-201ENST00000333229 TWISTNBQ3B726 338 aaPredicted RBP15.2■□□□□ 0.02
BRWD1-201ENST00000333229 LCA5Q86VQ0 697 aa15.2■□□□□ 0.02
BRWD1-201ENST00000333229 CCDC63Q8NA47 563 aa15.2■□□□□ 0.02
BRWD1-201ENST00000333229 THEGQ9P2T0 379 aa15.2■□□□□ 0.02
BRWD1-201ENST00000333229 TUBBP07437 444 aa15.2■□□□□ 0.02
BRWD1-201ENST00000333229 NDC80O14777 642 aa15.2■□□□□ 0.02
BRWD1-201ENST00000333229 MTHFSP49914 203 aa15.19■□□□□ 0.02
BRWD1-201ENST00000333229 FAM69CQ0P6D2 419 aa15.19■□□□□ 0.02
BRWD1-201ENST00000333229 BLOC1S2Q6QNY1 142 aa15.19■□□□□ 0.02
BRWD1-201ENST00000333229 RAB3IPQ96QF0 476 aaPredicted RBP15.19■□□□□ 0.02
BRWD1-201ENST00000333229 CEP104O60308 925 aa15.19■□□□□ 0.02
BRWD1-201ENST00000333229 ATP5DP30049 168 aa15.19■□□□□ 0.02
BRWD1-201ENST00000333229 FYB2Q5VWT5 728 aa15.19■□□□□ 0.02
BRWD1-201ENST00000333229 VPS41P49754 854 aa15.19■□□□□ 0.02
BRWD1-201ENST00000333229 SLC4A8Q2Y0W8 1093 aa15.19■□□□□ 0.02
BRWD1-201ENST00000333229 EIF2AQ9BY44 585 aaKnown RBP15.19■□□□□ 0.02
BRWD1-201ENST00000333229 TTC12Q9H892 705 aaPredicted RBP15.19■□□□□ 0.02
BRWD1-201ENST00000333229 CCDC144CPQ8IYA2 1237 aa15.18■□□□□ 0.02
BRWD1-201ENST00000333229 MICAL1Q8TDZ2 1067 aa15.18■□□□□ 0.02
BRWD1-201ENST00000333229 MCUR1Q96AQ8 359 aa15.18■□□□□ 0.02
BRWD1-201ENST00000333229 HVCN1Q96D96 273 aa15.18■□□□□ 0.02
BRWD1-201ENST00000333229 ANKIB1Q9P2G1 1089 aa15.18■□□□□ 0.02
BRWD1-201ENST00000333229 PUF60Q9UHX1 559 aaKnown RBP15.18■□□□□ 0.02
BRWD1-201ENST00000333229 IGHMBP2P38935 993 aaKnown RBP15.18■□□□□ 0.02
BRWD1-201ENST00000333229 AIDAQ96BJ3 306 aa15.18■□□□□ 0.02
BRWD1-201ENST00000333229 CCDC92Q53HC0 331 aaPredicted RBP15.18■□□□□ 0.02
BRWD1-201ENST00000333229 AFAP1L1Q8TED9 768 aa15.18■□□□□ 0.02
BRWD1-201ENST00000333229 CETN1Q12798 172 aa15.18■□□□□ 0.02
BRWD1-201ENST00000333229 CCDC62Q6P9F0 684 aa15.18■□□□□ 0.02
BRWD1-201ENST00000333229 PRPHP41219 470 aa15.18■□□□□ 0.02
BRWD1-201ENST00000333229 JAKMIP2Q96AA8 810 aa15.18■□□□□ 0.02
BRWD1-201ENST00000333229 SLMAPQ14BN4 828 aa15.18■□□□□ 0.02
BRWD1-201ENST00000333229 GKAP1Q5VSY0 366 aaPredicted RBP15.18■□□□□ 0.02
BRWD1-201ENST00000333229 PHAXQ9H814 394 aaKnown RBP15.18■□□□□ 0.02
BRWD1-201ENST00000333229 LIMCH1Q9UPQ0 1083 aa15.18■□□□□ 0.02
BRWD1-201ENST00000333229 BACH2Q9BYV9 841 aa15.17■□□□□ 0.02
BRWD1-201ENST00000333229 CCT4P50991 539 aaKnown RBP15.17■□□□□ 0.02
BRWD1-201ENST00000333229 NOP2P46087 812 aaKnown RBP15.17■□□□□ 0.02
BRWD1-201ENST00000333229 ZSWIM4Q9H7M6 989 aa15.17■□□□□ 0.02
BRWD1-201ENST00000333229 EXOSC9Q06265 439 aaKnown RBP15.17■□□□□ 0.02
BRWD1-201ENST00000333229 KIAA1524Q8TCG1 905 aa15.17■□□□□ 0.02
BRWD1-201ENST00000333229 SMIM24O75264 130 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms