RNA–Protein interactions for RNA: ENST00000333001.10

CMTM1-203, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 883 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-203ENST00000333001 LTBP3Q9NS15 1303 aa15.83■□□□□ 0.12
CMTM1-203ENST00000333001 NTSR2O95665 410 aa15.82■□□□□ 0.12
CMTM1-203ENST00000333001 SLC10A5Q5PT55 438 aa15.82■□□□□ 0.12
CMTM1-203ENST00000333001 WDR63Q8IWG1 891 aa15.82■□□□□ 0.12
CMTM1-203ENST00000333001 RPGRQ92834 1020 aaKnown RBP15.82■□□□□ 0.12
CMTM1-203ENST00000333001 NLRP3Q96P20 1036 aa15.82■□□□□ 0.12
CMTM1-203ENST00000333001 ARFGEF2Q9Y6D5 1785 aa15.82■□□□□ 0.12
CMTM1-203ENST00000333001 SLX4Q8IY92 1834 aa15.82■□□□□ 0.12
CMTM1-203ENST00000333001 ELL2O00472 640 aaPredicted RBP15.81■□□□□ 0.12
CMTM1-203ENST00000333001 RASSF7Q02833 373 aa15.81■□□□□ 0.12
CMTM1-203ENST00000333001 GRIPAP1Q4V328 841 aa15.81■□□□□ 0.12
CMTM1-203ENST00000333001 CCDC93Q567U6 631 aa15.81■□□□□ 0.12
CMTM1-203ENST00000333001 CC2D2BQ6DHV5 1058 aa15.81■□□□□ 0.12
CMTM1-203ENST00000333001 RTKN2Q8IZC4 609 aa15.81■□□□□ 0.12
CMTM1-203ENST00000333001 RBM17Q96I25 401 aaKnown RBP15.81■□□□□ 0.12
CMTM1-203ENST00000333001 TAOK3Q9H2K8 898 aa15.81■□□□□ 0.12
CMTM1-203ENST00000333001 ZNF219Q9P2Y4 722 aaPredicted RBP15.81■□□□□ 0.12
CMTM1-203ENST00000333001 FER1L6Q2WGJ9 1857 aa15.8■□□□□ 0.12
CMTM1-203ENST00000333001 NFKBIEO00221 500 aa15.8■□□□□ 0.12
CMTM1-203ENST00000333001 HOXA10P31260 410 aaPredicted RBP15.8■□□□□ 0.12
CMTM1-203ENST00000333001 GOLGA2Q08379 1002 aa15.8■□□□□ 0.12
CMTM1-203ENST00000333001 NLRP10Q86W26 655 aa15.8■□□□□ 0.12
CMTM1-203ENST00000333001 FAM9BQ8IZU0 186 aa15.8■□□□□ 0.12
CMTM1-203ENST00000333001 C8orf58Q8NAV2 365 aa15.8■□□□□ 0.12
CMTM1-203ENST00000333001 RBM46Q8TBY0 533 aaKnown RBP15.8■□□□□ 0.12
CMTM1-203ENST00000333001 C7orf43Q8WVR3 580 aa15.8■□□□□ 0.12
CMTM1-203ENST00000333001 NMRK2Q9NPI5 230 aa15.8■□□□□ 0.12
CMTM1-203ENST00000333001 TRMT112Q9UI30 125 aaKnown RBP15.8■□□□□ 0.12
CMTM1-203ENST00000333001 CCDC88AQ3V6T2 1871 aa15.8■□□□□ 0.12
CMTM1-203ENST00000333001 ABCC12Q96J65 1359 aa15.79■□□□□ 0.12
CMTM1-203ENST00000333001 DDX58O95786 925 aaKnown RBP15.79■□□□□ 0.12
CMTM1-203ENST00000333001 DPY19L2Q6NUT2 758 aa15.79■□□□□ 0.12
CMTM1-203ENST00000333001 RIC3Q7Z5B4 369 aa15.79■□□□□ 0.12
CMTM1-203ENST00000333001 CRAMP1Q96RY5 1269 aa15.79■□□□□ 0.12
CMTM1-203ENST00000333001 TMX4Q9H1E5 349 aaPredicted RBP15.79■□□□□ 0.12
CMTM1-203ENST00000333001 ANKRD36CQ5JPF3 1778 aa15.79■□□□□ 0.12
CMTM1-203ENST00000333001 CACNA1SQ13698 1873 aa15.78■□□□□ 0.12
CMTM1-203ENST00000333001 SH3TC1Q8TE82 1336 aa15.78■□□□□ 0.12
CMTM1-203ENST00000333001 FSTL1Q12841 308 aa15.78■□□□□ 0.12
CMTM1-203ENST00000333001 TRIM28Q13263 835 aaKnown RBP15.78■□□□□ 0.12
CMTM1-203ENST00000333001 STK31Q9BXU1 1019 aa15.78■□□□□ 0.12
CMTM1-203ENST00000333001 GLTPD2A6NH11 291 aa15.77■□□□□ 0.12
CMTM1-203ENST00000333001 HSP90B1P14625 803 aaKnown RBP15.77■□□□□ 0.12
CMTM1-203ENST00000333001 TSR2Q969E8 191 aaKnown RBP15.77■□□□□ 0.12
CMTM1-203ENST00000333001 ISCA1Q9BUE6 129 aa15.77■□□□□ 0.12
CMTM1-203ENST00000333001 PCNTO95613 3336 aa15.76■□□□□ 0.11
CMTM1-203ENST00000333001 DICER1Q9UPY3 1922 aaKnown RBP15.76■□□□□ 0.11
CMTM1-203ENST00000333001 FKBP4Q02790 459 aaKnown RBP eCLIP15.76■□□□□ 0.11
CMTM1-203ENST00000333001 TWISTNBQ3B726 338 aaPredicted RBP15.76■□□□□ 0.11
CMTM1-203ENST00000333001 PRELPP51888 382 aa15.75■□□□□ 0.11
CMTM1-203ENST00000333001 TSPYL6Q8N831 410 aa15.75■□□□□ 0.11
CMTM1-203ENST00000333001 PHAXQ9H814 394 aaKnown RBP15.75■□□□□ 0.11
CMTM1-203ENST00000333001 SALL2Q9Y467 1007 aaPredicted RBP15.75■□□□□ 0.11
CMTM1-203ENST00000333001 WDR90Q96KV7 1748 aa15.74■□□□□ 0.11
CMTM1-203ENST00000333001 BBOX1O75936 387 aa15.74■□□□□ 0.11
CMTM1-203ENST00000333001 DNAJC5GQ8N7S2 189 aa15.74■□□□□ 0.11
CMTM1-203ENST00000333001 PSMD1Q99460 953 aa15.74■□□□□ 0.11
CMTM1-203ENST00000333001 MYH16Q9H6N6 1097 aa15.74■□□□□ 0.11
CMTM1-203ENST00000333001 CACNA1FO60840 1977 aa15.74■□□□□ 0.11
CMTM1-203ENST00000333001 TNRC6CQ9HCJ0 1690 aaKnown RBP15.73■□□□□ 0.11
CMTM1-203ENST00000333001 ATP5J2-PTCD1G3V325 749 aa15.73■□□□□ 0.11
CMTM1-203ENST00000333001 HCLS1P14317 486 aaPredicted RBP15.73■□□□□ 0.11
CMTM1-203ENST00000333001 VEGFAP15692 232 aaPredicted RBP15.73■□□□□ 0.11
CMTM1-203ENST00000333001 DDX46Q7L014 1031 aaKnown RBP15.73■□□□□ 0.11
CMTM1-203ENST00000333001 CCDC191Q8NCU4 936 aa15.73■□□□□ 0.11
CMTM1-203ENST00000333001 RRAGCQ9HB90 399 aa15.73■□□□□ 0.11
CMTM1-203ENST00000333001 FANCIQ9NVI1 1328 aa15.72■□□□□ 0.11
CMTM1-203ENST00000333001 PPEF1O14829 653 aaPredicted RBP15.72■□□□□ 0.11
CMTM1-203ENST00000333001 KSR2Q6VAB6 950 aa15.72■□□□□ 0.11
CMTM1-203ENST00000333001 TMC4Q7Z404 712 aa15.72■□□□□ 0.11
CMTM1-203ENST00000333001 SYNE4Q8N205 404 aa15.72■□□□□ 0.11
CMTM1-203ENST00000333001 SMC1BQ8NDV3 1235 aa15.72■□□□□ 0.11
CMTM1-203ENST00000333001 KLRG1Q96E93 195 aa15.72■□□□□ 0.11
CMTM1-203ENST00000333001 METTL22Q9BUU2 404 aaPredicted RBP15.72■□□□□ 0.11
CMTM1-203ENST00000333001 SLC4A2P04920 1241 aa15.71■□□□□ 0.11
CMTM1-203ENST00000333001 NEXNQ0ZGT2 675 aa15.71■□□□□ 0.11
CMTM1-203ENST00000333001 C3orf67Q6ZVT6 689 aa15.71■□□□□ 0.11
CMTM1-203ENST00000333001 ZBTB38Q8NAP3 1195 aaPredicted RBP15.71■□□□□ 0.11
CMTM1-203ENST00000333001 FAM89AQ96GI7 184 aa15.71■□□□□ 0.11
CMTM1-203ENST00000333001 MYD88Q99836 296 aa15.71■□□□□ 0.11
CMTM1-203ENST00000333001 VPS33BQ9H267 617 aa15.71■□□□□ 0.11
CMTM1-203ENST00000333001 ATP6V0A2Q9Y487 856 aa15.71■□□□□ 0.11
CMTM1-203ENST00000333001 TIAM2Q8IVF5 1701 aa15.71■□□□□ 0.1
CMTM1-203ENST00000333001 CCER2I3L3R5 266 aa15.7■□□□□ 0.1
CMTM1-203ENST00000333001 IARSP41252 1262 aaKnown RBP15.7■□□□□ 0.1
CMTM1-203ENST00000333001 SF3B3Q15393 1217 aaKnown RBP15.7■□□□□ 0.1
CMTM1-203ENST00000333001 SP8Q8IXZ3 490 aa15.7■□□□□ 0.1
CMTM1-203ENST00000333001 JDP2Q8WYK2 163 aa15.7■□□□□ 0.1
CMTM1-203ENST00000333001 ZNF277Q9NRM2 450 aaPredicted RBP15.7■□□□□ 0.1
CMTM1-203ENST00000333001 CWC25Q9NXE8 425 aaPredicted RBP15.7■□□□□ 0.1
CMTM1-203ENST00000333001 ABCC4O15439 1325 aa15.69■□□□□ 0.1
CMTM1-203ENST00000333001 PI4KAP2A4QPH2 592 aa15.69■□□□□ 0.1
CMTM1-203ENST00000333001 IRS4O14654 1257 aaPredicted RBP15.69■□□□□ 0.1
CMTM1-203ENST00000333001 VAMP4O75379 141 aa15.69■□□□□ 0.1
CMTM1-203ENST00000333001 GRAPQ13588 217 aa15.69■□□□□ 0.1
CMTM1-203ENST00000333001 OLFM4Q6UX06 510 aa15.69■□□□□ 0.1
CMTM1-203ENST00000333001 PI4KAP1Q8N8J0 262 aa15.69■□□□□ 0.1
CMTM1-203ENST00000333001 SUPT20HQ8NEM7 779 aa15.69■□□□□ 0.1
CMTM1-203ENST00000333001 GRAPLQ8TC17 118 aaPredicted RBP15.69■□□□□ 0.1
CMTM1-203ENST00000333001 MAP3K2Q9Y2U5 619 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms