RNA–Protein interactions for RNA: ENST00000332840.9

SYN3-201, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-201ENST00000332840 DLG5Q8TDM6 1919 aa12.49□□□□□ -0.41
SYN3-201ENST00000332840 TIAM2Q8IVF5 1701 aa12.48□□□□□ -0.41
SYN3-201ENST00000332840 PDIA6Q15084 440 aa12.48□□□□□ -0.41
SYN3-201ENST00000332840 PARP10Q53GL7 1025 aa12.48□□□□□ -0.41
SYN3-201ENST00000332840 GIGYF2Q6Y7W6 1299 aaKnown RBP12.48□□□□□ -0.41
SYN3-201ENST00000332840 MYH16Q9H6N6 1097 aa12.48□□□□□ -0.41
SYN3-201ENST00000332840 NRXN2Q9P2S2 1712 aa12.48□□□□□ -0.41
SYN3-201ENST00000332840 STYK1Q6J9G0 422 aa12.47□□□□□ -0.41
SYN3-201ENST00000332840 TTLL7Q6ZT98 887 aa12.47□□□□□ -0.41
SYN3-201ENST00000332840 LRP10Q7Z4F1 713 aa12.47□□□□□ -0.41
SYN3-201ENST00000332840 C16orf71Q8IYS4 520 aaPredicted RBP12.47□□□□□ -0.41
SYN3-201ENST00000332840 CNKSR1Q969H4 720 aa12.47□□□□□ -0.41
SYN3-201ENST00000332840 ZBTB3Q9H5J0 574 aa12.47□□□□□ -0.41
SYN3-201ENST00000332840 HYPKQ9NX55 129 aa12.47□□□□□ -0.41
SYN3-201ENST00000332840 HLFQ16534 295 aa12.46□□□□□ -0.41
SYN3-201ENST00000332840 SOGA3Q5TF21 947 aa12.46□□□□□ -0.41
SYN3-201ENST00000332840 C9orf131Q5VYM1 1079 aa12.46□□□□□ -0.41
SYN3-201ENST00000332840 PPP1R42Q7Z4L9 355 aa12.46□□□□□ -0.41
SYN3-201ENST00000332840 MASTLQ96GX5 879 aa12.46□□□□□ -0.41
SYN3-201ENST00000332840 CHPF2Q9P2E5 772 aa12.46□□□□□ -0.41
SYN3-201ENST00000332840 BCORQ6W2J9 1755 aa12.46□□□□□ -0.42
SYN3-201ENST00000332840 KLRG2A4D1S0 409 aaPredicted RBP12.45□□□□□ -0.42
SYN3-201ENST00000332840 SRGNP10124 158 aa12.45□□□□□ -0.42
SYN3-201ENST00000332840 RRP1P56182 461 aaKnown RBP12.45□□□□□ -0.42
SYN3-201ENST00000332840 KRT24Q2M2I5 525 aa12.45□□□□□ -0.42
SYN3-201ENST00000332840 PROSER3Q2NL68 480 aa12.45□□□□□ -0.42
SYN3-201ENST00000332840 COPS6Q7L5N1 327 aa12.45□□□□□ -0.42
SYN3-201ENST00000332840 ZNF34Q8IZ26 560 aa12.45□□□□□ -0.42
SYN3-201ENST00000332840 XAGE3Q8WTP9 111 aa12.45□□□□□ -0.42
SYN3-201ENST00000332840 NECTIN2Q92692 538 aa12.45□□□□□ -0.42
SYN3-201ENST00000332840 ZNF622Q969S3 477 aaKnown RBP eCLIP12.45□□□□□ -0.42
SYN3-201ENST00000332840 RIC1Q4ADV7 1423 aa12.45□□□□□ -0.42
SYN3-201ENST00000332840 DICER1Q9UPY3 1922 aaKnown RBP12.45□□□□□ -0.42
SYN3-201ENST00000332840 DLEC1Q9Y238 1755 aa12.44□□□□□ -0.42
SYN3-201ENST00000332840 NPR1P16066 1061 aa12.44□□□□□ -0.42
SYN3-201ENST00000332840 CCDC30Q5VVM6 783 aa12.44□□□□□ -0.42
SYN3-201ENST00000332840 PLBD2Q8NHP8 589 aa12.44□□□□□ -0.42
SYN3-201ENST00000332840 KLRG1Q96E93 195 aa12.44□□□□□ -0.42
SYN3-201ENST00000332840 RRAGCQ9HB90 399 aa12.44□□□□□ -0.42
SYN3-201ENST00000332840 ZC3H4Q9UPT8 1303 aaKnown RBP12.43□□□□□ -0.42
SYN3-201ENST00000332840 FAM177BA6PVY3 158 aa12.43□□□□□ -0.42
SYN3-201ENST00000332840 ANXA1P04083 346 aa12.43□□□□□ -0.42
SYN3-201ENST00000332840 GPTP24298 496 aa12.43□□□□□ -0.42
SYN3-201ENST00000332840 IRX6P78412 446 aaPredicted RBP12.43□□□□□ -0.42
SYN3-201ENST00000332840 AIMP1Q12904 312 aaKnown RBP12.43□□□□□ -0.42
SYN3-201ENST00000332840 ANKRD13DQ6ZTN6 518 aa12.43□□□□□ -0.42
SYN3-201ENST00000332840 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.43□□□□□ -0.42
SYN3-201ENST00000332840 STK31Q9BXU1 1019 aa12.43□□□□□ -0.42
SYN3-201ENST00000332840 RNF181Q9P0P0 153 aa12.43□□□□□ -0.42
SYN3-201ENST00000332840 UBN2Q6ZU65 1347 aa12.42□□□□□ -0.42
SYN3-201ENST00000332840 NTSR2O95665 410 aa12.42□□□□□ -0.42
SYN3-201ENST00000332840 DDX58O95786 925 aaKnown RBP12.42□□□□□ -0.42
SYN3-201ENST00000332840 CT47B1P0C2W7 299 aaPredicted RBP12.42□□□□□ -0.42
SYN3-201ENST00000332840 ALDH1B1P30837 517 aa12.42□□□□□ -0.42
SYN3-201ENST00000332840 TCIRG1Q13488 830 aa12.42□□□□□ -0.42
SYN3-201ENST00000332840 PRPF40BQ6NWY9 871 aaKnown RBP12.42□□□□□ -0.42
SYN3-201ENST00000332840 CCDC24Q8N4L8 307 aa12.42□□□□□ -0.42
SYN3-201ENST00000332840 RBM46Q8TBY0 533 aaKnown RBP12.42□□□□□ -0.42
SYN3-201ENST00000332840 UTP14AQ9BVJ6 771 aaKnown RBP12.42□□□□□ -0.42
SYN3-201ENST00000332840 CRY2Q49AN0 593 aa12.41□□□□□ -0.42
SYN3-201ENST00000332840 SUSD4Q5VX71 490 aa12.41□□□□□ -0.42
SYN3-201ENST00000332840 TNS4Q8IZW8 715 aa12.41□□□□□ -0.42
SYN3-201ENST00000332840 C8orf58Q8NAV2 365 aa12.41□□□□□ -0.42
SYN3-201ENST00000332840 ELL2O00472 640 aaPredicted RBP12.4□□□□□ -0.42
SYN3-201ENST00000332840 HSP90B1P14625 803 aaKnown RBP12.4□□□□□ -0.42
SYN3-201ENST00000332840 LMNB1P20700 586 aa12.4□□□□□ -0.42
SYN3-201ENST00000332840 RASSF7Q02833 373 aa12.4□□□□□ -0.42
SYN3-201ENST00000332840 TWISTNBQ3B726 338 aaPredicted RBP12.4□□□□□ -0.42
SYN3-201ENST00000332840 ERFEQ4G0M1 354 aa12.4□□□□□ -0.42
SYN3-201ENST00000332840 GRIPAP1Q4V328 841 aa12.4□□□□□ -0.42
SYN3-201ENST00000332840 RPGRQ92834 1020 aaKnown RBP12.4□□□□□ -0.42
SYN3-201ENST00000332840 TSR2Q969E8 191 aaKnown RBP12.4□□□□□ -0.42
SYN3-201ENST00000332840 PPP4R2Q9NY27 417 aa12.4□□□□□ -0.42
SYN3-201ENST00000332840 ABCC12Q96J65 1359 aa12.4□□□□□ -0.42
SYN3-201ENST00000332840 ANKRD31Q8N7Z5 1873 aa12.4□□□□□ -0.42
SYN3-201ENST00000332840 SH3TC1Q8TE82 1336 aa12.39□□□□□ -0.43
SYN3-201ENST00000332840 LTBP3Q9NS15 1303 aa12.39□□□□□ -0.43
SYN3-201ENST00000332840 FANCIQ9NVI1 1328 aa12.39□□□□□ -0.43
SYN3-201ENST00000332840 TRIM28Q13263 835 aaKnown RBP12.39□□□□□ -0.43
SYN3-201ENST00000332840 CCDC93Q567U6 631 aa12.39□□□□□ -0.43
SYN3-201ENST00000332840 SLC10A5Q5PT55 438 aa12.39□□□□□ -0.43
SYN3-201ENST00000332840 CC2D2BQ6DHV5 1058 aa12.39□□□□□ -0.43
SYN3-201ENST00000332840 RIC3Q7Z5B4 369 aa12.39□□□□□ -0.43
SYN3-201ENST00000332840 NLRP10Q86W26 655 aa12.39□□□□□ -0.43
SYN3-201ENST00000332840 NUTM1Q86Y26 1132 aa12.39□□□□□ -0.43
SYN3-201ENST00000332840 NLRP3Q96P20 1036 aa12.39□□□□□ -0.43
SYN3-201ENST00000332840 TRMT112Q9UI30 125 aaKnown RBP12.39□□□□□ -0.43
SYN3-201ENST00000332840 KDM2BQ8NHM5 1336 aa12.38□□□□□ -0.43
SYN3-201ENST00000332840 C21orf2O43822 256 aa12.38□□□□□ -0.43
SYN3-201ENST00000332840 HOXA10P31260 410 aaPredicted RBP12.38□□□□□ -0.43
SYN3-201ENST00000332840 RTKN2Q8IZC4 609 aa12.38□□□□□ -0.43
SYN3-201ENST00000332840 RBM17Q96I25 401 aaKnown RBP12.38□□□□□ -0.43
SYN3-201ENST00000332840 TMX4Q9H1E5 349 aaPredicted RBP12.38□□□□□ -0.43
SYN3-201ENST00000332840 TAOK3Q9H2K8 898 aa12.38□□□□□ -0.43
SYN3-201ENST00000332840 NFKBIEO00221 500 aa12.37□□□□□ -0.43
SYN3-201ENST00000332840 EXOSC9Q06265 439 aaKnown RBP12.37□□□□□ -0.43
SYN3-201ENST00000332840 TSPYL6Q8N831 410 aa12.37□□□□□ -0.43
SYN3-201ENST00000332840 JMYQ8N9B5 988 aa12.37□□□□□ -0.43
SYN3-201ENST00000332840 CRAMP1Q96RY5 1269 aa12.37□□□□□ -0.43
SYN3-201ENST00000332840 ISCA1Q9BUE6 129 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms