RNA–Protein interactions for RNA: ENST00000331479.3

SMDT1-201, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMDT1, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-201ENST00000331479 CCDC191Q8NCU4 936 aa32.98■■■□□ 2.87
SMDT1-201ENST00000331479 KIF13BQ9NQT8 1826 aa32.97■■■□□ 2.87
SMDT1-201ENST00000331479 ERFEQ4G0M1 354 aa32.97■■■□□ 2.87
SMDT1-201ENST00000331479 LINS1Q8NG48 757 aa32.97■■■□□ 2.87
SMDT1-201ENST00000331479 ARHGAP45Q92619 1136 aa32.97■■■□□ 2.87
SMDT1-201ENST00000331479 SYNE4Q8N205 404 aa32.96■■■□□ 2.87
SMDT1-201ENST00000331479 CWC25Q9NXE8 425 aaPredicted RBP32.96■■■□□ 2.87
SMDT1-201ENST00000331479 TRMT112Q9UI30 125 aaKnown RBP32.96■■■□□ 2.87
SMDT1-201ENST00000331479 TNNQ9UQP3 1299 aa32.96■■■□□ 2.87
SMDT1-201ENST00000331479 GTF2E1P29083 439 aaPredicted RBP32.96■■■□□ 2.87
SMDT1-201ENST00000331479 API5Q9BZZ5 524 aaKnown RBP32.96■■■□□ 2.87
SMDT1-201ENST00000331479 CD2APQ9Y5K6 639 aa32.96■■■□□ 2.87
SMDT1-201ENST00000331479 ABCC12Q96J65 1359 aa32.95■■■□□ 2.87
SMDT1-201ENST00000331479 ST5P78524 1137 aa32.95■■■□□ 2.86
SMDT1-201ENST00000331479 ANKRD31Q8N7Z5 1873 aa32.94■■■□□ 2.86
SMDT1-201ENST00000331479 IPO8O15397 1037 aaKnown RBP32.94■■■□□ 2.86
SMDT1-201ENST00000331479 TRIM27P14373 513 aa32.94■■■□□ 2.86
SMDT1-201ENST00000331479 RTL5Q5HYW3 569 aaPredicted RBP32.94■■■□□ 2.86
SMDT1-201ENST00000331479 FAM89AQ96GI7 184 aa32.94■■■□□ 2.86
SMDT1-201ENST00000331479 SYT17Q9BSW7 474 aa32.94■■■□□ 2.86
SMDT1-201ENST00000331479 ATF7IPQ6VMQ6 1270 aa32.93■■■□□ 2.86
SMDT1-201ENST00000331479 ZKSCAN2Q63HK3 967 aa32.92■■■□□ 2.86
SMDT1-201ENST00000331479 NLGN2Q8NFZ4 835 aa32.92■■■□□ 2.86
SMDT1-201ENST00000331479 JARID2Q92833 1246 aaPredicted RBP32.92■■■□□ 2.86
SMDT1-201ENST00000331479 GCKRQ14397 625 aa32.92■■■□□ 2.86
SMDT1-201ENST00000331479 BRIP1Q9BX63 1249 aa32.92■■■□□ 2.86
SMDT1-201ENST00000331479 SRCIN1Q9C0H9 1055 aa32.92■■■□□ 2.86
SMDT1-201ENST00000331479 SH3TC1Q8TE82 1336 aa32.91■■■□□ 2.86
SMDT1-201ENST00000331479 ZBTB38Q8NAP3 1195 aaPredicted RBP32.91■■■□□ 2.86
SMDT1-201ENST00000331479 GOLGB1Q14789 3259 aaKnown RBP32.91■■■□□ 2.86
SMDT1-201ENST00000331479 PXDNLA1KZ92 1463 aa32.9■■■□□ 2.86
SMDT1-201ENST00000331479 RNF123Q5XPI4 1314 aa32.9■■■□□ 2.86
SMDT1-201ENST00000331479 CLUAP1Q96AJ1 413 aa32.89■■■□□ 2.86
SMDT1-201ENST00000331479 KIAA1551Q9HCM1 1747 aa32.89■■■□□ 2.86
SMDT1-201ENST00000331479 TNRC6CQ9HCJ0 1690 aaKnown RBP32.88■■■□□ 2.85
SMDT1-201ENST00000331479 ABCC4O15439 1325 aa32.88■■■□□ 2.85
SMDT1-201ENST00000331479 ALDH1L1O75891 902 aa32.87■■■□□ 2.85
SMDT1-201ENST00000331479 PCCAP05165 728 aaPredicted RBP32.87■■■□□ 2.85
SMDT1-201ENST00000331479 HCLS1P14317 486 aaPredicted RBP32.87■■■□□ 2.85
SMDT1-201ENST00000331479 SLC10A5Q5PT55 438 aa32.87■■■□□ 2.85
SMDT1-201ENST00000331479 TGFB2P61812 414 aa32.87■■■□□ 2.85
SMDT1-201ENST00000331479 N4BP2Q86UW6 1770 aaPredicted RBP32.87■■■□□ 2.85
SMDT1-201ENST00000331479 A0A0G2JLW4 131 aa32.86■■■□□ 2.85
SMDT1-201ENST00000331479 CHRNA5P30532 468 aa32.86■■■□□ 2.85
SMDT1-201ENST00000331479 H7C1W4 665 aa32.85■■■□□ 2.85
SMDT1-201ENST00000331479 PLIN1O60240 522 aa32.85■■■□□ 2.85
SMDT1-201ENST00000331479 C3orf67Q6ZVT6 689 aa32.85■■■□□ 2.85
SMDT1-201ENST00000331479 DDX60Q8IY21 1712 aaKnown RBP32.85■■■□□ 2.85
SMDT1-201ENST00000331479 DPEP1P16444 411 aa32.84■■■□□ 2.85
SMDT1-201ENST00000331479 PDE6BP35913 854 aa32.84■■■□□ 2.85
SMDT1-201ENST00000331479 UBE3BQ7Z3V4 1068 aa32.84■■■□□ 2.85
SMDT1-201ENST00000331479 IRS4O14654 1257 aaPredicted RBP32.83■■■□□ 2.85
SMDT1-201ENST00000331479 CCT4P50991 539 aaKnown RBP32.83■■■□□ 2.85
SMDT1-201ENST00000331479 RIC1Q4ADV7 1423 aa32.83■■■□□ 2.85
SMDT1-201ENST00000331479 KLRG2A4D1S0 409 aaPredicted RBP32.83■■■□□ 2.85
SMDT1-201ENST00000331479 KCNA3P22001 575 aa32.83■■■□□ 2.85
SMDT1-201ENST00000331479 CASP7P55210 303 aa32.83■■■□□ 2.85
SMDT1-201ENST00000331479 C2CD5Q86YS7 1000 aa32.83■■■□□ 2.85
SMDT1-201ENST00000331479 COL11A2P13942 1736 aaPredicted RBP32.83■■■□□ 2.85
SMDT1-201ENST00000331479 RLBP1P12271 317 aa32.82■■■□□ 2.84
SMDT1-201ENST00000331479 INTS3Q68E01 1043 aaKnown RBP32.82■■■□□ 2.84
SMDT1-201ENST00000331479 GRM8O00222 908 aa32.81■■■□□ 2.84
SMDT1-201ENST00000331479 CDHR2Q9BYE9 1310 aa32.8■■■□□ 2.84
SMDT1-201ENST00000331479 DZIP1LQ8IYY4 767 aaKnown RBP32.8■■■□□ 2.84
SMDT1-201ENST00000331479 C9orf78Q9NZ63 289 aaPredicted RBP32.8■■■□□ 2.84
SMDT1-201ENST00000331479 H0YIN7 160 aa32.79■■■□□ 2.84
SMDT1-201ENST00000331479 TMEM57Q8N5G2 664 aa32.79■■■□□ 2.84
SMDT1-201ENST00000331479 NLRP3Q96P20 1036 aa32.79■■■□□ 2.84
SMDT1-201ENST00000331479 LAMB2P55268 1798 aa32.79■■■□□ 2.84
SMDT1-201ENST00000331479 SRGNP10124 158 aa32.79■■■□□ 2.84
SMDT1-201ENST00000331479 FTSJ3Q8IY81 847 aaKnown RBP32.79■■■□□ 2.84
SMDT1-201ENST00000331479 WWC3Q9ULE0 1092 aa32.79■■■□□ 2.84
SMDT1-201ENST00000331479 NBPF7P0C2Y1 421 aaPredicted RBP32.78■■■□□ 2.84
SMDT1-201ENST00000331479 CRY2Q49AN0 593 aa32.78■■■□□ 2.84
SMDT1-201ENST00000331479 USP44Q9H0E7 712 aa32.78■■■□□ 2.84
SMDT1-201ENST00000331479 PANK1Q8TE04 598 aa32.77■■■□□ 2.84
SMDT1-201ENST00000331479 DLEC1Q9Y238 1755 aa32.76■■■□□ 2.84
SMDT1-201ENST00000331479 UTYO14607 1347 aa32.76■■■□□ 2.83
SMDT1-201ENST00000331479 PDZRN3Q9UPQ7 1066 aa32.75■■■□□ 2.83
SMDT1-201ENST00000331479 PDE8AO60658 829 aa32.75■■■□□ 2.83
SMDT1-201ENST00000331479 UTRNP46939 3433 aa32.74■■■□□ 2.83
SMDT1-201ENST00000331479 ZNF622Q969S3 477 aaKnown RBP eCLIP32.74■■■□□ 2.83
SMDT1-201ENST00000331479 BRCA1P38398 1863 aaKnown RBP32.74■■■□□ 2.83
SMDT1-201ENST00000331479 C20orf194Q5TEA3 1177 aa32.73■■■□□ 2.83
SMDT1-201ENST00000331479 GOLGA6L2Q8N9W4 650 aaPredicted RBP32.73■■■□□ 2.83
SMDT1-201ENST00000331479 MASTLQ96GX5 879 aa32.73■■■□□ 2.83
SMDT1-201ENST00000331479 HSP90B1P14625 803 aaKnown RBP32.72■■■□□ 2.83
SMDT1-201ENST00000331479 NPR1P16066 1061 aa32.72■■■□□ 2.83
SMDT1-201ENST00000331479 SF3B3Q15393 1217 aaKnown RBP32.72■■■□□ 2.83
SMDT1-201ENST00000331479 PLA2G12BQ9BX93 195 aa32.72■■■□□ 2.83
SMDT1-201ENST00000331479 MEIS3Q99687 375 aa32.71■■■□□ 2.83
SMDT1-201ENST00000331479 PIM2Q9P1W9 311 aa32.71■■■□□ 2.83
SMDT1-201ENST00000331479 RRP1P56182 461 aaKnown RBP32.7■■■□□ 2.83
SMDT1-201ENST00000331479 STYK1Q6J9G0 422 aa32.7■■■□□ 2.83
SMDT1-201ENST00000331479 RPGRQ92834 1020 aaKnown RBP32.7■■■□□ 2.83
SMDT1-201ENST00000331479 KAZALD1Q96I82 304 aa32.7■■■□□ 2.83
SMDT1-201ENST00000331479 SUCLG2Q96I99 432 aa32.7■■■□□ 2.83
SMDT1-201ENST00000331479 EPHA10Q5JZY3 1008 aa32.7■■■□□ 2.82
SMDT1-201ENST00000331479 CCDC85AQ96PX6 553 aaPredicted RBP32.7■■■□□ 2.82
SMDT1-201ENST00000331479 MS4A1P11836 297 aa32.69■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms