RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 NPC1L1Q9UHC9 1359 aa16.31■□□□□ 0.2
EPHB3-201ENST00000330394 GOLIM4O00461 696 aa16.3■□□□□ 0.2
EPHB3-201ENST00000330394 IFNKQ9P0W0 207 aa16.3■□□□□ 0.2
EPHB3-201ENST00000330394 MARCKSP29966 332 aaPredicted RBP16.3■□□□□ 0.2
EPHB3-201ENST00000330394 IMMTQ16891 758 aaKnown RBP16.3■□□□□ 0.2
EPHB3-201ENST00000330394 CCDC181Q5TID7 509 aa16.3■□□□□ 0.2
EPHB3-201ENST00000330394 CBX8Q9HC52 389 aa16.3■□□□□ 0.2
EPHB3-201ENST00000330394 PNMA6EA0A0J9YXQ4 647 aa16.3■□□□□ 0.2
EPHB3-201ENST00000330394 C10orf67Q8IYJ2 551 aa16.3■□□□□ 0.2
EPHB3-201ENST00000330394 CTNNA3Q9UI47 895 aa16.3■□□□□ 0.2
EPHB3-201ENST00000330394 A0A1W2PP64 1363 aa16.3■□□□□ 0.2
EPHB3-201ENST00000330394 CNNM1Q9NRU3 951 aa16.3■□□□□ 0.2
EPHB3-201ENST00000330394 LARP1Q6PKG0 1096 aaKnown RBP16.29■□□□□ 0.2
EPHB3-201ENST00000330394 PYCARDQ9ULZ3 195 aa16.29■□□□□ 0.2
EPHB3-201ENST00000330394 DNA2P51530 1060 aa16.29■□□□□ 0.2
EPHB3-201ENST00000330394 Q6ZUG5 572 aa16.29■□□□□ 0.2
EPHB3-201ENST00000330394 NMIQ13287 307 aaPredicted RBP16.29■□□□□ 0.2
EPHB3-201ENST00000330394 EIF4A2Q14240 407 aaKnown RBP16.29■□□□□ 0.2
EPHB3-201ENST00000330394 IFIT1P09914 478 aaKnown RBP16.28■□□□□ 0.2
EPHB3-201ENST00000330394 KIAA1328Q86T90 577 aa16.28■□□□□ 0.2
EPHB3-201ENST00000330394 CHPF2Q9P2E5 772 aa16.28■□□□□ 0.2
EPHB3-201ENST00000330394 SNX14Q9Y5W7 946 aa16.28■□□□□ 0.2
EPHB3-201ENST00000330394 CREB3L3Q68CJ9 461 aa16.28■□□□□ 0.2
EPHB3-201ENST00000330394 CCDC150Q8NCX0 1101 aa16.28■□□□□ 0.2
EPHB3-201ENST00000330394 ZSCAN16Q9H4T2 348 aaPredicted RBP16.28■□□□□ 0.2
EPHB3-201ENST00000330394 CCDC57Q2TAC2 916 aa16.28■□□□□ 0.2
EPHB3-201ENST00000330394 DENND4BO75064 1496 aaPredicted RBP16.27■□□□□ 0.2
EPHB3-201ENST00000330394 SAMD9Q5K651 1589 aa16.27■□□□□ 0.2
EPHB3-201ENST00000330394 DBF4Q9UBU7 674 aaPredicted RBP16.27■□□□□ 0.2
EPHB3-201ENST00000330394 RSPH14Q9UHP6 348 aa16.27■□□□□ 0.2
EPHB3-201ENST00000330394 FANCAO15360 1455 aa16.27■□□□□ 0.2
EPHB3-201ENST00000330394 ATP5J2-PTCD1G3V325 749 aa16.27■□□□□ 0.19
EPHB3-201ENST00000330394 PTCD1O75127 700 aaKnown RBP16.27■□□□□ 0.19
EPHB3-201ENST00000330394 EIF5P55010 431 aaKnown RBP16.27■□□□□ 0.19
EPHB3-201ENST00000330394 PHAXQ9H814 394 aaKnown RBP16.27■□□□□ 0.19
EPHB3-201ENST00000330394 ADAMTS12P58397 1594 aa16.27■□□□□ 0.19
EPHB3-201ENST00000330394 CDKL5O76039 1030 aa16.27■□□□□ 0.19
EPHB3-201ENST00000330394 MRPS27Q92552 414 aaKnown RBP16.27■□□□□ 0.19
EPHB3-201ENST00000330394 A0A1B0GVL5 298 aa16.26■□□□□ 0.19
EPHB3-201ENST00000330394 TXLNAP40222 546 aa16.26■□□□□ 0.19
EPHB3-201ENST00000330394 KARSQ15046 597 aaKnown RBP16.26■□□□□ 0.19
EPHB3-201ENST00000330394 MTHFSDQ2M296 383 aaKnown RBP16.26■□□□□ 0.19
EPHB3-201ENST00000330394 MICU3Q86XE3 530 aa16.26■□□□□ 0.19
EPHB3-201ENST00000330394 SMARCC1Q92922 1105 aaPredicted RBP16.26■□□□□ 0.19
EPHB3-201ENST00000330394 CDR1P51861 262 aa16.26■□□□□ 0.19
EPHB3-201ENST00000330394 EVA1CP58658 441 aa16.26■□□□□ 0.19
EPHB3-201ENST00000330394 CCDC191Q8NCU4 936 aa16.26■□□□□ 0.19
EPHB3-201ENST00000330394 GBP3Q9H0R5 595 aa16.26■□□□□ 0.19
EPHB3-201ENST00000330394 ZNF75DP51815 510 aa16.25■□□□□ 0.19
EPHB3-201ENST00000330394 UBE3BQ7Z3V4 1068 aa16.25■□□□□ 0.19
EPHB3-201ENST00000330394 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.25■□□□□ 0.19
EPHB3-201ENST00000330394 CAPN2P17655 700 aa16.25■□□□□ 0.19
EPHB3-201ENST00000330394 SYKP43405 635 aa16.25■□□□□ 0.19
EPHB3-201ENST00000330394 UTP14AQ9BVJ6 771 aaKnown RBP16.25■□□□□ 0.19
EPHB3-201ENST00000330394 CDC37L1Q7L3B6 337 aa16.25■□□□□ 0.19
EPHB3-201ENST00000330394 KDM5BQ9UGL1 1544 aa16.25■□□□□ 0.19
EPHB3-201ENST00000330394 HMGB1P09429 215 aaKnown RBP16.24■□□□□ 0.19
EPHB3-201ENST00000330394 RUFY3Q7L099 469 aa16.24■□□□□ 0.19
EPHB3-201ENST00000330394 ZNF215Q9UL58 517 aaPredicted RBP16.24■□□□□ 0.19
EPHB3-201ENST00000330394 SOS1Q07889 1333 aaPredicted RBP16.24■□□□□ 0.19
EPHB3-201ENST00000330394 CD109Q6YHK3 1445 aa16.24■□□□□ 0.19
EPHB3-201ENST00000330394 A0A087WZG4 1122 aa16.24■□□□□ 0.19
EPHB3-201ENST00000330394 PIP4K2AP48426 406 aaPredicted RBP16.24■□□□□ 0.19
EPHB3-201ENST00000330394 ZC3H6P61129 1189 aaKnown RBP16.24■□□□□ 0.19
EPHB3-201ENST00000330394 PUF60Q9UHX1 559 aaKnown RBP16.24■□□□□ 0.19
EPHB3-201ENST00000330394 NUP88Q99567 741 aaPredicted RBP16.24■□□□□ 0.19
EPHB3-201ENST00000330394 NRBP1Q9UHY1 535 aa16.24■□□□□ 0.19
EPHB3-201ENST00000330394 KDM5CP41229 1560 aa16.24■□□□□ 0.19
EPHB3-201ENST00000330394 EPS15P42566 896 aa16.24■□□□□ 0.19
EPHB3-201ENST00000330394 ODF2Q5BJF6 829 aa16.24■□□□□ 0.19
EPHB3-201ENST00000330394 TXLNBQ8N3L3 684 aa16.24■□□□□ 0.19
EPHB3-201ENST00000330394 ERO1AQ96HE7 468 aa16.24■□□□□ 0.19
EPHB3-201ENST00000330394 PLCH2O75038 1416 aa16.23■□□□□ 0.19
EPHB3-201ENST00000330394 TDO2P48775 406 aa16.23■□□□□ 0.19
EPHB3-201ENST00000330394 APOBRQ0VD83 1088 aa16.23■□□□□ 0.19
EPHB3-201ENST00000330394 CCDC148Q8NFR7 591 aa16.23■□□□□ 0.19
EPHB3-201ENST00000330394 TANGO6Q9C0B7 1094 aa16.23■□□□□ 0.19
EPHB3-201ENST00000330394 PIK3R4Q99570 1358 aa16.23■□□□□ 0.19
EPHB3-201ENST00000330394 SGSM2O43147 1006 aa16.23■□□□□ 0.19
EPHB3-201ENST00000330394 CWF19L2Q2TBE0 894 aaKnown RBP16.23■□□□□ 0.19
EPHB3-201ENST00000330394 CCDC102BQ68D86 513 aa16.23■□□□□ 0.19
EPHB3-201ENST00000330394 LZTFL1Q9NQ48 299 aa16.23■□□□□ 0.19
EPHB3-201ENST00000330394 PPIP5K1Q6PFW1 1433 aa16.23■□□□□ 0.19
EPHB3-201ENST00000330394 KLF18A0A0U1RQI7 1052 aa16.22■□□□□ 0.19
EPHB3-201ENST00000330394 SIRT2Q8IXJ6 389 aa16.22■□□□□ 0.19
EPHB3-201ENST00000330394 PLCD4Q9BRC7 762 aa16.22■□□□□ 0.19
EPHB3-201ENST00000330394 HMG20BQ9P0W2 317 aa16.22■□□□□ 0.19
EPHB3-201ENST00000330394 ZNF213O14771 459 aa16.22■□□□□ 0.19
EPHB3-201ENST00000330394 MATR3P43243 847 aaKnown RBP eCLIP16.22■□□□□ 0.19
EPHB3-201ENST00000330394 CEBPAP49715 358 aaPredicted RBP16.22■□□□□ 0.19
EPHB3-201ENST00000330394 FAM227BQ96M60 508 aa16.22■□□□□ 0.19
EPHB3-201ENST00000330394 ITSN2Q9NZM3 1697 aa16.22■□□□□ 0.19
EPHB3-201ENST00000330394 VPS18Q9P253 973 aa16.22■□□□□ 0.19
EPHB3-201ENST00000330394 ACEP12821 1306 aa16.22■□□□□ 0.19
EPHB3-201ENST00000330394 GOLGA6L10A6NI86 522 aa16.21■□□□□ 0.19
EPHB3-201ENST00000330394 EVCP57679 992 aa16.21■□□□□ 0.19
EPHB3-201ENST00000330394 ZSCAN25Q6NSZ9 544 aa16.21■□□□□ 0.19
EPHB3-201ENST00000330394 UBAC1Q9BSL1 405 aa16.21■□□□□ 0.19
EPHB3-201ENST00000330394 CARD6Q9BX69 1037 aa16.21■□□□□ 0.19
EPHB3-201ENST00000330394 CABP4P57796 275 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms