RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 CCDC144CPQ8IYA2 1237 aa9.84□□□□□ -0.83
SKA2-201ENST00000330137 NFATC2IPQ8NCF5 419 aa9.84□□□□□ -0.83
SKA2-201ENST00000330137 TAOK2Q9UL54 1235 aa9.84□□□□□ -0.83
SKA2-201ENST00000330137 HDAC5Q9UQL6 1122 aa9.84□□□□□ -0.83
SKA2-201ENST00000330137 RRP15Q9Y3B9 282 aaKnown RBP9.84□□□□□ -0.83
SKA2-201ENST00000330137 SETD1BQ9UPS6 1966 aaKnown RBP9.84□□□□□ -0.83
SKA2-201ENST00000330137 ABCC3O15438 1527 aa9.84□□□□□ -0.83
SKA2-201ENST00000330137 CCT4P50991 539 aaKnown RBP9.84□□□□□ -0.83
SKA2-201ENST00000330137 ERCC6LQ2NKX8 1250 aa9.84□□□□□ -0.83
SKA2-201ENST00000330137 ARHGAP29Q52LW3 1261 aa9.84□□□□□ -0.83
SKA2-201ENST00000330137 GPR161Q8N6U8 529 aaKnown RBP9.84□□□□□ -0.83
SKA2-201ENST00000330137 MNS1Q8NEH6 495 aa9.84□□□□□ -0.83
SKA2-201ENST00000330137 PPM1EQ8WY54 764 aa9.84□□□□□ -0.83
SKA2-201ENST00000330137 KCNB2Q92953 911 aa9.84□□□□□ -0.83
SKA2-201ENST00000330137 TACO1Q9BSH4 297 aaKnown RBP9.84□□□□□ -0.83
SKA2-201ENST00000330137 LRRCC1Q9C099 1032 aa9.84□□□□□ -0.83
SKA2-201ENST00000330137 ST7Q9NRC1 585 aa9.84□□□□□ -0.83
SKA2-201ENST00000330137 BCCIPQ9P287 314 aaKnown RBP eCLIP9.84□□□□□ -0.83
SKA2-201ENST00000330137 JRKLQ9Y4A0 524 aa9.84□□□□□ -0.83
SKA2-201ENST00000330137 NEXMIFQ5QGS0 1516 aa9.83□□□□□ -0.84
SKA2-201ENST00000330137 RIMS2Q9UQ26 1411 aa9.83□□□□□ -0.84
SKA2-201ENST00000330137 CCDC69A6NI79 296 aa9.83□□□□□ -0.84
SKA2-201ENST00000330137 TTC31Q49AM3 519 aaPredicted RBP9.83□□□□□ -0.84
SKA2-201ENST00000330137 GTF3C6Q969F1 213 aa9.83□□□□□ -0.84
SKA2-201ENST00000330137 DEF6Q9H4E7 631 aa9.83□□□□□ -0.84
SKA2-201ENST00000330137 ITSN1Q15811 1721 aa9.83□□□□□ -0.84
SKA2-201ENST00000330137 CRYBG1Q9Y4K1 1723 aa9.83□□□□□ -0.84
SKA2-201ENST00000330137 GOLGA6L4A6NEF3 574 aa9.83□□□□□ -0.84
SKA2-201ENST00000330137 ATP2B1P20020 1258 aa9.83□□□□□ -0.84
SKA2-201ENST00000330137 CASTP20810 708 aaKnown RBP9.83□□□□□ -0.84
SKA2-201ENST00000330137 GJB2P29033 226 aa9.83□□□□□ -0.84
SKA2-201ENST00000330137 AK2P54819 239 aa9.83□□□□□ -0.84
SKA2-201ENST00000330137 CCDC91Q7Z6B0 441 aa9.83□□□□□ -0.84
SKA2-201ENST00000330137 FCHSD1Q86WN1 690 aa9.83□□□□□ -0.84
SKA2-201ENST00000330137 CEP120Q8N960 986 aa9.83□□□□□ -0.84
SKA2-201ENST00000330137 CEP89Q96ST8 783 aa9.83□□□□□ -0.84
SKA2-201ENST00000330137 FAM107BQ9H098 131 aa9.83□□□□□ -0.84
SKA2-201ENST00000330137 ALDH8A1Q9H2A2 487 aaPredicted RBP9.83□□□□□ -0.84
SKA2-201ENST00000330137 DNAI1Q9UI46 699 aa9.83□□□□□ -0.84
SKA2-201ENST00000330137 CAMSAP1Q5T5Y3 1602 aa9.83□□□□□ -0.84
SKA2-201ENST00000330137 CD163L1Q9NR16 1453 aa9.83□□□□□ -0.84
SKA2-201ENST00000330137 MSH6P52701 1360 aa9.82□□□□□ -0.84
SKA2-201ENST00000330137 FYB1O15117 783 aa9.82□□□□□ -0.84
SKA2-201ENST00000330137 PRKAR2BP31323 418 aa9.82□□□□□ -0.84
SKA2-201ENST00000330137 STX1AQ16623 288 aa9.82□□□□□ -0.84
SKA2-201ENST00000330137 LEKR1Q6ZMV7 388 aa9.82□□□□□ -0.84
SKA2-201ENST00000330137 RUFY3Q7L099 469 aa9.82□□□□□ -0.84
SKA2-201ENST00000330137 TTC6Q86TZ1 520 aa9.82□□□□□ -0.84
SKA2-201ENST00000330137 SMARCE1Q969G3 411 aa9.82□□□□□ -0.84
SKA2-201ENST00000330137 UTP14AQ9BVJ6 771 aaKnown RBP9.82□□□□□ -0.84
SKA2-201ENST00000330137 SNX14Q9Y5W7 946 aa9.82□□□□□ -0.84
SKA2-201ENST00000330137 NPATQ14207 1427 aa9.82□□□□□ -0.84
SKA2-201ENST00000330137 TNRQ92752 1358 aa9.82□□□□□ -0.84
SKA2-201ENST00000330137 GSCP56915 257 aaPredicted RBP9.82□□□□□ -0.84
SKA2-201ENST00000330137 SMC1AQ14683 1233 aaKnown RBP9.82□□□□□ -0.84
SKA2-201ENST00000330137 LRRFIP1Q32MZ4 808 aaKnown RBP9.82□□□□□ -0.84
SKA2-201ENST00000330137 C10orf67Q8IYJ2 551 aa9.82□□□□□ -0.84
SKA2-201ENST00000330137 NEK11Q8NG66 645 aa9.82□□□□□ -0.84
SKA2-201ENST00000330137 UPF3BQ9BZI7 483 aaKnown RBP9.82□□□□□ -0.84
SKA2-201ENST00000330137 HYPKQ9NX55 129 aa9.82□□□□□ -0.84
SKA2-201ENST00000330137 DACT1Q9NYF0 836 aa9.82□□□□□ -0.84
SKA2-201ENST00000330137 TRAK1Q9UPV9 953 aa9.82□□□□□ -0.84
SKA2-201ENST00000330137 N4BP2Q86UW6 1770 aaPredicted RBP9.82□□□□□ -0.84
SKA2-201ENST00000330137 SETD1AO15047 1707 aaKnown RBP9.82□□□□□ -0.84
SKA2-201ENST00000330137 USP27XA6NNY8 438 aa9.81□□□□□ -0.84
SKA2-201ENST00000330137 SGSM2O43147 1006 aa9.81□□□□□ -0.84
SKA2-201ENST00000330137 ETF1P62495 437 aaKnown RBP9.81□□□□□ -0.84
SKA2-201ENST00000330137 FOXD4L6Q3SYB3 417 aaPredicted RBP9.81□□□□□ -0.84
SKA2-201ENST00000330137 FOXD4L3Q6VB84 417 aaPredicted RBP9.81□□□□□ -0.84
SKA2-201ENST00000330137 NAT10Q9H0A0 1025 aaKnown RBP9.81□□□□□ -0.84
SKA2-201ENST00000330137 DLG5Q8TDM6 1919 aa9.81□□□□□ -0.84
SKA2-201ENST00000330137 TADA3O75528 432 aa9.81□□□□□ -0.84
SKA2-201ENST00000330137 OAS2P29728 719 aaKnown RBP9.81□□□□□ -0.84
SKA2-201ENST00000330137 SRPK2P78362 688 aaKnown RBP9.81□□□□□ -0.84
SKA2-201ENST00000330137 REXO1L1PQ8IX06 675 aa9.81□□□□□ -0.84
SKA2-201ENST00000330137 C8orf58Q8NAV2 365 aa9.81□□□□□ -0.84
SKA2-201ENST00000330137 BPIFA3Q9BQP9 254 aa9.81□□□□□ -0.84
SKA2-201ENST00000330137 STAG3Q9UJ98 1225 aa9.81□□□□□ -0.84
SKA2-201ENST00000330137 TBC1D8O95759 1140 aa9.8□□□□□ -0.84
SKA2-201ENST00000330137 LIG1P18858 919 aa9.8□□□□□ -0.84
SKA2-201ENST00000330137 PSME1Q06323 249 aa9.8□□□□□ -0.84
SKA2-201ENST00000330137 CC2D1AQ6P1N0 951 aaPredicted RBP9.8□□□□□ -0.84
SKA2-201ENST00000330137 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.8□□□□□ -0.84
SKA2-201ENST00000330137 HNRNPLLQ8WVV9 542 aaKnown RBP9.8□□□□□ -0.84
SKA2-201ENST00000330137 SIRT1Q96EB6 747 aa9.8□□□□□ -0.84
SKA2-201ENST00000330137 PPP1R13BQ96KQ4 1090 aa9.8□□□□□ -0.84
SKA2-201ENST00000330137 ARFGAP3Q9NP61 516 aa9.8□□□□□ -0.84
SKA2-201ENST00000330137 GOLGA6L9A6NEM1 432 aa9.8□□□□□ -0.84
SKA2-201ENST00000330137 GNAI2P04899 355 aa9.8□□□□□ -0.84
SKA2-201ENST00000330137 CCDC172P0C7W6 258 aa9.8□□□□□ -0.84
SKA2-201ENST00000330137 BRD3Q15059 726 aa9.8□□□□□ -0.84
SKA2-201ENST00000330137 ATL3Q6DD88 541 aa9.8□□□□□ -0.84
SKA2-201ENST00000330137 ZSWIM6Q9HCJ5 1215 aa9.8□□□□□ -0.84
SKA2-201ENST00000330137 ANO10Q9NW15 660 aa9.8□□□□□ -0.84
SKA2-201ENST00000330137 ADAM21Q9UKJ8 722 aa9.8□□□□□ -0.84
SKA2-201ENST00000330137 CEP83Q9Y592 693 aa9.8□□□□□ -0.84
SKA2-201ENST00000330137 RAB11FIP3O75154 756 aa9.8□□□□□ -0.84
SKA2-201ENST00000330137 ANKRD1Q15327 319 aa9.8□□□□□ -0.84
SKA2-201ENST00000330137 E4F1Q66K89 784 aaPredicted RBP9.8□□□□□ -0.84
SKA2-201ENST00000330137 SPATA32Q96LK8 384 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms